- Physical Review Journals
All JournalsPhysics Magazine

Physical Review E

Volume 79, Issue 5

May 2009
Browse Issues:
PrevNext

HIGHLIGHTED ARTICLES

FEATURED IN PHYSICS

Diffusion, dimensionality, and noise in transcriptional regulation

Gašper Tkačik and William Bialek

Phys. Rev. E 79, 051901 (2009) - Published 4 May, 2009

RAPID COMMUNICATIONS

Statistical physics

RAPID COMMUNICATION

Statistics of static avalanches in a random pinning landscape

Pierre Le Doussal, A. Alan Middleton, and Kay Jörg Wiese

Phys. Rev. E 79, 050101(R) (2009) - Published 7 May, 2009

RAPID COMMUNICATION

Structural crossover of polymers in disordered media

Roni Parshani, Lidia A. Braunstein, and Shlomo Havlin

Phys. Rev. E 79, 050102(R) (2009) - Published 15 May, 2009

RAPID COMMUNICATION

Negative differential thermal resistance induced by ballistic transport

Wei-Rong Zhong, Ping Yang, Bao-Quan Ai, Zhi-Gang Shao, and Bambi Hu

Phys. Rev. E 79, 050103(R) (2009) - Published 20 May, 2009

RAPID COMMUNICATION

Nonlinear preferential rewiring in fixed-size networks as a diffusion process

Samuel Johnson, Joaquín J. Torres, and Joaquín Marro

Phys. Rev. E 79, 050104(R) (2009) - Published 21 May, 2009

RAPID COMMUNICATION

Classical diffusion of a quantum particle in a noisy environment

Ariel Amir, Yoav Lahini, and Hagai B. Perets

Phys. Rev. E 79, 050105(R) (2009) - Published 22 May, 2009

RAPID COMMUNICATION

Cusps, self-organization, and absorbing states

Juan A. Bonachela, Mikko Alava, and Miguel A. Muñoz

Phys. Rev. E 79, 050106(R) (2009) - Published 26 May, 2009

RAPID COMMUNICATION

Short-time Loschmidt gap in dynamical systems with critical chaos

Carl T. West, Tomaz Prosen, and Tsampikos Kottos

Phys. Rev. E 79, 050107(R) (2009) - Published 29 May, 2009

Granular materials

RAPID COMMUNICATION

Growing length and time scales in a suspension of athermal particles

Takahiro Hatano

Phys. Rev. E 79, 050301(R) (2009) - Published 1 May, 2009

Colloidal dispersions, suspensions, and aggregates

RAPID COMMUNICATION

One- and two-dimensional assembly of colloidal ellipsoids in ac electric fields

John P. Singh, Pushkar P. Lele, Florian Nettesheim, Norman J. Wagner, and Eric M. Furst

Phys. Rev. E 79, 050401(R) (2009) - Published 13 May, 2009

Structured and complex fluids

RAPID COMMUNICATION

Forces between functionalized silica nanoparticles in solution

J. Matthew D. Lane, Ahmed E. Ismail, Michael Chandross, Christian D. Lorenz, and Gary S. Grest

Phys. Rev. E 79, 050501(R) (2009) - Published 5 May, 2009

Films, interfaces, and crystal growth

RAPID COMMUNICATION

Self-organization of decaying surface corrugations: A numerical study

Andrea Bonito, Ricardo H. Nochetto, John Quah, and Dionisios Margetis

Phys. Rev. E 79, 050601(R) (2009) - Published 11 May, 2009

Polymers

RAPID COMMUNICATION

All-or-none proteinlike folding transition of a flexible homopolymer chain

Mark P. Taylor, Wolfgang Paul, and Kurt Binder

Phys. Rev. E 79, 050801(R) (2009) - Published 7 May, 2009

RAPID COMMUNICATION

Perimeter length and form factor in two-dimensional polymer melts

H. Meyer, T. Kreer, M. Aichele, A. Cavallo, A. Johner, J. Baschnagel, and J. P. Wittmer

Phys. Rev. E 79, 050802(R) (2009) - Published 21 May, 2009

Biological physics

RAPID COMMUNICATION

Protein fluorescence decay: A gamma function description of thermally induced interconversion of amino acid rotamers

Olaf J. Rolinski, Katherine Scobie, and David J. S. Birch

Phys. Rev. E 79, 050901(R) (2009) - Published 28 May, 2009

ARTICLES

Statistical physics

Effect of translational and angular momentum conservation on energy equipartition in microcanonical equilibrium in small clusters

Tomoaki Niiyama, Yasushi Shimizu, Taizo R. Kobayashi, Teruaki Okushima, and Kensuke S. Ikeda

Phys. Rev. E 79, 051101 (2009) - Published 1 May, 2009

Directed transport in periodically rocked random sawtooth potentials

S. I. Denisov, T. V. Lyutyy, E. S. Denisova, P. Hänggi, and H. Kantz

Phys. Rev. E 79, 051102 (2009) - Published 4 May, 2009

Spin-1/2 Ising-Heisenberg model with the pair XYZ Heisenberg interaction and quartic Ising interactions as the exactly soluble zero-field eight-vertex model

Jozef Strečka, Lucia Čanová, and Kazuhiko Minami

Phys. Rev. E 79, 051103 (2009) - Published 6 May, 2009

Spatially correlated diversity-induced resonance

Dan Wu, Shiqun Zhu, and Xiaoqin Luo

Phys. Rev. E 79, 051104 (2009) - Published 6 May, 2009

Driven particle in a random landscape: Disorder correlator, avalanche distribution, and extreme value statistics of records

Pierre Le Doussal and Kay Jörg Wiese

Phys. Rev. E 79, 051105 (2009) - Published 7 May, 2009

Size distributions of shocks and static avalanches from the functional renormalization group

Pierre Le Doussal and Kay Jörg Wiese

Phys. Rev. E 79, 051106 (2009) - Published 7 May, 2009

Two-time quantum transport and quantum diffusion

P. Kleinert

Phys. Rev. E 79, 051107 (2009) - Published 8 May, 2009

Bethe approximation for a DNA-like self-avoiding walk model with variable solvent quality

D. P. Foster and C. Pinettes

Phys. Rev. E 79, 051108 (2009) - Published 8 May, 2009

Mean-value identities as an opportunity for Monte Carlo error reduction

L. A. Fernandez and V. Martin-Mayor

Phys. Rev. E 79, 051109 (2009) - Published 11 May, 2009

Phase-field-crystal and Swift-Hohenberg equations with fast dynamics

Peter Galenko, Denis Danilov, and Vladimir Lebedev

Phys. Rev. E 79, 051110 (2009) - Published 12 May, 2009

Nonperturbative approach to quantum Brownian motion

Subhasis Sinha and P. A. Sreeram

Phys. Rev. E 79, 051111 (2009) - Published 13 May, 2009

Critical behavior of the spin correlation function in the Ashkin-Teller and Baxter models with a line defect

Carlos Naón

Phys. Rev. E 79, 051112 (2009) - Published 14 May, 2009

Mean field model of coagulation and annihilation reactions in a medium of quenched traps: Subdiffusion

I. M. Sokolov, S. B. Yuste, J. J. Ruiz-Lorenzo, and Katja Lindenberg

Phys. Rev. E 79, 051113 (2009) - Published 14 May, 2009

Renormalization of oscillator lattices with disorder

Per Östborn

Phys. Rev. E 79, 051114 (2009) - Published 14 May, 2009

Phase transitions induced by complex nonlinear noise in a system of self-propelled agents

V. Dossetti, F. J. Sevilla, and V. M. Kenkre

Phys. Rev. E 79, 051115 (2009) - Published 15 May, 2009

Exact time-averaged thermal conductance for small systems: Comparison between direct calculation and Green-Kubo formalism

W. A. M. Morgado and D. O. Soares-Pinto

Phys. Rev. E 79, 051116 (2009) - Published 15 May, 2009

Energy landscape of a spin-glass model: Exploration and characterization

Qing Zhou and Wing Hung Wong

Phys. Rev. E 79, 051117 (2009) - Published 18 May, 2009

Ensemble inequivalence in single-molecule experiments

M. Süzen, M. Sega, and C. Holm

Phys. Rev. E 79, 051118 (2009) - Published 18 May, 2009

Equality of bond-percolation critical exponents for pairs of dual lattices

Matthew R. A. Sedlock and John C. Wierman

Phys. Rev. E 79, 051119 (2009) - Published 19 May, 2009

Solvable stochastic dealer models for financial markets

Kenta Yamada, Hideki Takayasu, Takatoshi Ito, and Misako Takayasu

Phys. Rev. E 79, 051120 (2009) - Published 19 May, 2009

Thermodynamics of a subensemble of a canonical ensemble

Maxim F. Gelin and Michael Thoss

Phys. Rev. E 79, 051121 (2009) - Published 20 May, 2009

Spin-glass attractor on tridimensional hierarchical lattices in the presence of an external magnetic field

Octavio R. Salmon and Fernando D. Nobre

Phys. Rev. E 79, 051122 (2009) - Published 20 May, 2009

Entropy of continuous Markov processes in local thermal equilibrium

Miguel Hoyuelos

Phys. Rev. E 79, 051123 (2009) - Published 22 May, 2009

Temporal evolution of product shock measures in the totally asymmetric simple exclusion process with sublattice-parallel update

F. H. Jafarpour and S. R. Masharian

Phys. Rev. E 79, 051124 (2009) - Published 22 May, 2009

Critical domain-wall dynamics of model B

R. H. Dong, B. Zheng, and N. J. Zhou

Phys. Rev. E 79, 051125 (2009) - Published 22 May, 2009

Nonlinear closure relations theory for transport processes in nonequilibrium systems

Giorgio Sonnino

Phys. Rev. E 79, 051126 (2009) - Published 26 May, 2009

Directed polymer in random media with a defect

Jae Hwan Lee (이재환) and Jin Min Kim (김진민)

Phys. Rev. E 79, 051127 (2009) - Published 26 May, 2009

Constructive influence of noise flatness and friction on the resonant behavior of a harmonic oscillator with fluctuating frequency

Katrin Laas, Romi Mankin, and Astrid Rekker

Phys. Rev. E 79, 051128 (2009) - Published 26 May, 2009

Statistical mechanics of Floquet systems: The pervasive problem of near degeneracies

Daniel W. Hone, Roland Ketzmerick, and Walter Kohn

Phys. Rev. E 79, 051129 (2009) - Published 27 May, 2009

Crossover from the parity-conserving pair contact process with diffusion to other universality classes

Su-Chan Park and Hyunggyu Park

Phys. Rev. E 79, 051130 (2009) - Published 28 May, 2009

Limit cycles, complex Floquet multipliers, and intrinsic noise

Richard P. Boland, Tobias Galla, and Alan J. McKane

Phys. Rev. E 79, 051131 (2009) - Published 29 May, 2009

Equilibrium and linear transport properties of fluids

Improved model for the transit entropy of monatomic liquids

Duane C. Wallace, Eric D. Chisolm, and Nicolas Bock

Phys. Rev. E 79, 051201 (2009) - Published 20 May, 2009

Waterlike thermodynamic anomalies in a repulsive-shoulder potential system

N. V. Gribova, Yu. D. Fomin, Daan Frenkel, and V. N. Ryzhov

Phys. Rev. E 79, 051202 (2009) - Published 20 May, 2009

Granular materials

Three-dimensional simulations of a vertically vibrated granular bed including interstitial air

V. Idler, I. Sánchez, R. Paredes, G. Gutiérrez, L. I. Reyes, and R. Botet

Phys. Rev. E 79, 051301 (2009) - Published 6 May, 2009

Subparticle stress fields in granular solids

Vincent Topin, Farhang Radjai, and Jean-Yves Delenne

Phys. Rev. E 79, 051302 (2009) - Published 7 May, 2009

Segregation pattern competition in a thin rotating drum

I. Zuriguel, J. Peixinho, and T. Mullin

Phys. Rev. E 79, 051303 (2009) - Published 14 May, 2009

Electrification of granular systems of identical insulators

Jasper F. Kok and Daniel J. Lacks

Phys. Rev. E 79, 051304 (2009) - Published 18 May, 2009

Fluctuating hydrodynamics for dilute granular gases

J. Javier Brey, P. Maynar, and M. I. García de Soria

Phys. Rev. E 79, 051305 (2009) - Published 18 May, 2009

Intermittency of rheological regimes in uniform liquid-granular flows

Aronne Armanini, Michele Larcher, and Luigi Fraccarollo

Phys. Rev. E 79, 051306 (2009) - Published 22 May, 2009

Dispersion of particles by spontaneous interparticle percolation through unconsolidated porous media

Franck Lominé and Luc Oger

Phys. Rev. E 79, 051307 (2009) - Published 29 May, 2009

Colloidal dispersions, suspensions, and aggregates

Anisotropies in thermal Casimir interactions: Ellipsoidal colloids trapped at a fluid interface

Ehsan Noruzifar and Martin Oettel

Phys. Rev. E 79, 051401 (2009) - Published 8 May, 2009

Hydrodynamics of confined colloidal fluids in two dimensions

Jimaan Sané, Johan T. Padding, and Ard A. Louis

Phys. Rev. E 79, 051402 (2009) - Published 12 May, 2009

Crystal structure of highly concentrated, ionic microgel suspensions studied by neutron scattering

U. Gasser, B. Sierra-Martin, and A. Fernandez-Nieves

Phys. Rev. E 79, 051403 (2009) - Published 12 May, 2009

Derivation of the phase-field-crystal model for colloidal solidification

Sven van Teeffelen, Rainer Backofen, Axel Voigt, and Hartmut Löwen

Phys. Rev. E 79, 051404 (2009) - Published 27 May, 2009

Hydrodynamic mobility of chiral colloidal aggregates

Eric E. Keaveny and Michael J. Shelley

Phys. Rev. E 79, 051405 (2009) - Published 28 May, 2009

Intermittent and spatially heterogeneous single-particle dynamics close to colloidal gelation

Yongxiang Gao and Maria L. Kilfoil

Phys. Rev. E 79, 051406 (2009) - Published 29 May, 2009

Structured and complex fluids

Glass formation and crystallization of a simple monatomic liquid

Tomoko Mizuguchi and Takashi Odagaki

Phys. Rev. E 79, 051501 (2009) - Published 11 May, 2009

Anisotropic spatially heterogeneous dynamics on the α and β relaxation time scales studied via a four-point correlation function

Elijah Flenner and Grzegorz Szamel

Phys. Rev. E 79, 051502 (2009) - Published 11 May, 2009

Ferromagnetic microswimmer

M. Belovs and A. Cēbers

Phys. Rev. E 79, 051503 (2009) - Published 13 May, 2009

Suppression of the dynamic transition in surface water at low hydration levels: A study of water on rutile

Eugene Mamontov, Lukas Vlcek, David J. Wesolowski, Peter T. Cummings, Jörgen Rosenqvist, Wei Wang, David R. Cole, Lawrence M. Anovitz, and Goran Gasparovic

Phys. Rev. E 79, 051504 (2009) - Published 22 May, 2009

Controlled structuring of binary hard-disk mixtures via a periodic, external potential

K. Franzrahe and P. Nielaba

Phys. Rev. E 79, 051505 (2009) - Published 28 May, 2009

Films, interfaces, and crystal growth

Growth kinetics of disk-shaped copper islands in electrochemical deposition

Lian Guo, Shouliang Zhang, and Peter Searson

Phys. Rev. E 79, 051601 (2009) - Published 1 May, 2009

Nucleation and hysteresis of vapor-liquid phase transitions in confined spaces: Effects of fluid-wall interaction

Yumei Men, Qingzhao Yan, Guangfeng Jiang, Xianren Zhang, and Wenchuan Wang

Phys. Rev. E 79, 051602 (2009) - Published 5 May, 2009

Influence of a longitudinal and tilted vibration on stability and dewetting of a liquid film

S. Shklyaev, A. A. Alabuzhev, and M. Khenner

Phys. Rev. E 79, 051603 (2009) - Published 7 May, 2009

Effects of substrate rotation in oblique-incidence metal(100) epitaxial growth

Yunsic Shim, Mary E. Mills, Valery Borovikov, and Jacques G. Amar

Phys. Rev. E 79, 051604 (2009) - Published 8 May, 2009

Parameter-free scaling relation for nonequilibrium growth processes

Yen-Liang Chou and Michel Pleimling

Phys. Rev. E 79, 051605 (2009) - Published 14 May, 2009

Rayleigh-Taylor instability of crystallization waves at the superfluid-solid H4e interface

S. N. Burmistrov, L. B. Dubovskii, and V. L. Tsymbalenko

Phys. Rev. E 79, 051606 (2009) - Published 21 May, 2009

Spinodal-assisted nucleation during symmetry-breaking phase transitions

Daniel A. Vega and Leopoldo R. Gómez

Phys. Rev. E 79, 051607 (2009) - Published 29 May, 2009

Liquid crystals

Surface viscosity in nematic liquid crystals

G. Barbero and L. Pandolfi

Phys. Rev. E 79, 051701 (2009) - Published 8 May, 2009

Electrically driven director-rotation of swollen nematic elastomers as revealed by polarized Fourier transform infrared spectroscopy

Atsushi Fukunaga, Kenji Urayama, Patrick Koelsch, and Toshikazu Takigawa

Phys. Rev. E 79, 051702 (2009) - Published 8 May, 2009

Influence of confinement in controlled-pore glass on the layer spacing of smectic-A liquid crystals

George Cordoyiannis, Aleksander Zidanšek, Gojmir Lahajnar, Zdravko Kutnjak, Heinz Amenitsch, George Nounesis, and Samo Kralj

Phys. Rev. E 79, 051703 (2009) - Published 11 May, 2009

Volume phase transitions of smectic gels

Akihiko Matsuyama

Phys. Rev. E 79, 051704 (2009) - Published 19 May, 2009

Polymers

Effects of molecular crowding on stretching of polymers in poor solvent

Amit Raj Singh, Debaprasad Giri, and Sanjay Kumar

Phys. Rev. E 79, 051801 (2009) - Published 11 May, 2009

Influence of the torsional potential on the glass transition temperature and the structure of amorphous polyethylene

Manel Canales

Phys. Rev. E 79, 051802 (2009) - Published 28 May, 2009

Biological physics

FEATURED IN PHYSICS

Diffusion, dimensionality, and noise in transcriptional regulation

Gašper Tkačik and William Bialek

Phys. Rev. E 79, 051901 (2009) - Published 4 May, 2009

Trapping probability analysis of a DNA trap using electric and hydrodrag force fields in tapered microchannels

Yuichi Tomizawa, Eiichi Tamiya, and Yuzuru Takamura

Phys. Rev. E 79, 051902 (2009) - Published 8 May, 2009

Stochastic model for tumor growth with immunization

Thomas Bose and Steffen Trimper

Phys. Rev. E 79, 051903 (2009) - Published 11 May, 2009

Self-organization of feed-forward structure and entrainment in excitatory neural networks with spike-timing-dependent plasticity

Yuko K. Takahashi, Hiroshi Kori, and Naoki Masuda

Phys. Rev. E 79, 051904 (2009) - Published 11 May, 2009

Linking topology of tethered polymer rings with applications to chromosome segregation and estimation of the knotting length

John F. Marko

Phys. Rev. E 79, 051905 (2009) - Published 11 May, 2009

Quantifying stochastic effects in biochemical reaction networks using partitioned leaping

Leonard A. Harris, Aaron M. Piccirilli, Emily R. Majusiak, and Paulette Clancy

Phys. Rev. E 79, 051906 (2009) - Published 12 May, 2009

Comparing the growth kinetics of cell populations in two and three dimensions

M. Radszuweit, M. Block, J. G. Hengstler, E. Schöll, and D. Drasdo

Phys. Rev. E 79, 051907 (2009) - Published 12 May, 2009

Partial independence of bioelectric and biomagnetic fields and its implications for encephalography and cardiography

Andrei Irimia, Kenneth R. Swinney, and John P. Wikswo

Phys. Rev. E 79, 051908 (2009) - Published 13 May, 2009

Data assimilation for heterogeneous networks: The consensus set

Timothy D. Sauer and Steven J. Schiff

Phys. Rev. E 79, 051909 (2009) - Published 13 May, 2009

Mapping of spatiotemporal heterogeneous particle dynamics in living cells

Michael H. G. Duits, Yixuan Li, Siva A. Vanapalli, and Frieder Mugele

Phys. Rev. E 79, 051910 (2009) - Published 13 May, 2009

Theory of tunneling across hydrogen-bonded base pairs for DNA recognition and sequencing

Myeong H. Lee and Otto F. Sankey

Phys. Rev. E 79, 051911 (2009) - Published 18 May, 2009

Formation of DNA toroids inside confined droplets adsorbed on mica surfaces

Xi-Miao Hou, Wei Li, Shuo-Xing Dou, Ling-Yun Zhang, Ping Xie, Wei-Chi Wang, and Peng-Ye Wang

Phys. Rev. E 79, 051912 (2009) - Published 18 May, 2009

Allosteric role of the large-scale domain opening in biological catch-binding

Yuriy V. Pereverzev, Oleg V. Prezhdo, and Evgeni V. Sokurenko

Phys. Rev. E 79, 051913 (2009) - Published 18 May, 2009

Neural complexity and structural connectivity

L. Barnett, C. L. Buckley, and S. Bullock

Phys. Rev. E 79, 051914 (2009) - Published 19 May, 2009

Ising model for neural data: Model quality and approximate methods for extracting functional connectivity

Yasser Roudi, Joanna Tyrcha, and John Hertz

Phys. Rev. E 79, 051915 (2009) - Published 19 May, 2009

Ratio control in a cascade model of cell differentiation

Hidetsugu Sakaguchi

Phys. Rev. E 79, 051916 (2009) - Published 19 May, 2009

Spike propagation in driven chain networks with dominant global inhibition

Wonil Chang and Dezhe Z. Jin

Phys. Rev. E 79, 051917 (2009) - Published 20 May, 2009

Nonlinear dynamics of cilia and flagella

Andreas Hilfinger, Amit K. Chattopadhyay, and Frank Jülicher

Phys. Rev. E 79, 051918 (2009) - Published 21 May, 2009

Conformation and translational diffusion of a xanthan polyelectrolyte chain: Brownian dynamics simulation and single molecule tracking

Myung-Suk Chun, Chongyoup Kim, and Duck E. Lee

Phys. Rev. E 79, 051919 (2009) - Published 27 May, 2009

Thermal activation and ATP dependence of the cytoskeleton remodeling dynamics

R. Sunyer, F. Ritort, R. Farré, and D. Navajas

Phys. Rev. E 79, 051920 (2009) - Published 27 May, 2009

Stochastic and coherence resonance in feed-forward-loop neuronal network motifs

Daqing Guo and Chunguang Li

Phys. Rev. E 79, 051921 (2009) - Published 27 May, 2009

Thermodynamic stability of small-world oscillator networks: A case study of proteins

Jie Ren and Baowen Li

Phys. Rev. E 79, 051922 (2009) - Published 27 May, 2009

DNA unzipping phase diagram calculated via replica theory

C. Brian Roland, Kristi Adamson Hatch, Mara Prentiss, and Eugene I. Shakhnovich

Phys. Rev. E 79, 051923 (2009) - Published 28 May, 2009

Shape deformation and fission route of the lipid domain in a multicomponent vesicle

Kai Yang, Xi Shao, and Yu-qiang Ma

Phys. Rev. E 79, 051924 (2009) - Published 29 May, 2009

BRIEF REPORTS

Statistical physics

Continuum percolation of isotropically oriented circular cylinders

D. Sangare and P. M. Adler

Phys. Rev. E 79, 052101 (2009) - Published 13 May, 2009

Optimal view angle in collective dynamics of self-propelled agents

Bao-Mei Tian, Han-Xin Yang, Wei Li, Wen-Xu Wang, Bing-Hong Wang, and Tao Zhou

Phys. Rev. E 79, 052102 (2009) - Published 18 May, 2009

Monte Carlo study of the competition between long-range and short-range correlated disorder in a second-order phase transition

Manuel I. Marqués

Phys. Rev. E 79, 052103 (2009) - Published 21 May, 2009

Logarithmic corrections in (4+1)-dimensional directed percolation

Peter Grassberger

Phys. Rev. E 79, 052104 (2009) - Published 26 May, 2009

Equilibrium and linear transport properties of fluids

Universal scaling law for energy and pressure in a shearing fluid

Caroline Desgranges and Jerome Delhommelle

Phys. Rev. E 79, 052201 (2009) - Published 14 May, 2009

Granular materials

Oscillatory phenomena of compartmentalized bidisperse granular gases

Rui Liu, Yinchang Li, and Meiying Hou

Phys. Rev. E 79, 052301 (2009) - Published 19 May, 2009

Extent of force indeterminacy in packings of frictional rigid disks

M. Reza Shaebani, Tamás Unger, and János Kertész

Phys. Rev. E 79, 052302 (2009) - Published 27 May, 2009

Films, interfaces, and crystal growth

Homogenization of reconstructed crystal surfaces: Fick’s law of diffusion

Dionisios Margetis

Phys. Rev. E 79, 052601 (2009) - Published 14 May, 2009

COMMENTS

Comment on “Casimir energies: Temperature dependence, dispersion, and anomalies”

Finn Ravndal

Phys. Rev. E 79, 053101 (2009) - Published 29 May, 2009

Comment on “Phase diagram of a solution undergoing inverse melting”

M. Plazanet, M. R. Johnson, and H. P. Trommsdorff

Phys. Rev. E 79, 053501 (2009) - Published 5 May, 2009

Reply to “Comment on ‘Phase diagram of a solution undergoing inverse melting’ ”

R. Angelini, G. Ruocco, and S. De Panfilis

Phys. Rev. E 79, 053502 (2009) - Published 5 May, 2009

RAPID COMMUNICATIONS

Interdisciplinary physics

RAPID COMMUNICATION

Diversity of rationality affects the evolution of cooperation

Yu-Zhong Chen, Zi-Gang Huang, Sheng-Jun Wang, Yan Zhang, and Ying-Hai Wang

Phys. Rev. E 79, 055101(R) (2009) - Published 11 May, 2009

Chaos and pattern formation

RAPID COMMUNICATION

Completely inelastic ball

T. Gilet, N. Vandewalle, and S. Dorbolo

Phys. Rev. E 79, 055201(R) (2009) - Published 18 May, 2009

RAPID COMMUNICATION

Experimental approach to the study of complex network synchronization using a single oscillator

A. N. Pisarchik, R. Jaimes-Reátegui, R. Sevilla-Escoboza, and S. Boccaletti

Phys. Rev. E 79, 055202(R) (2009) - Published 21 May, 2009

RAPID COMMUNICATION

Globally clustered chimera states in delay-coupled populations

Jane H. Sheeba, V. K. Chandrasekar, and M. Lakshmanan

Phys. Rev. E 79, 055203(R) (2009) - Published 21 May, 2009

Fluid dynamics

RAPID COMMUNICATION

Anomalous scaling of three-dimensional Rayleigh-Taylor turbulence

Takeshi Matsumoto

Phys. Rev. E 79, 055301(R) (2009) - Published 13 May, 2009

Plasma physics

RAPID COMMUNICATION

Dust-acoustic shock waves due to strong correlation among arbitrarily charged dust

A. A. Mamun and R. A. Cairns

Phys. Rev. E 79, 055401(R) (2009) - Published 21 May, 2009

ARTICLES

Interdisciplinary physics

Master-equation analysis of accelerating networks

David M. D. Smith, Jukka-Pekka Onnela, and Nick S. Jones

Phys. Rev. E 79, 056101 (2009) - Published 1 May, 2009

Maximizing influence propagation in networks with community structure

Aram Galstyan, Vahe Musoyan, and Paul Cohen

Phys. Rev. E 79, 056102 (2009) - Published 1 May, 2009

Diameter of basalt columns derived from fracture mechanics bifurcation analysis

H.-A. Bahr, M. Hofmann, H.-J. Weiss, U. Bahr, G. Fischer, and H. Balke

Phys. Rev. E 79, 056103 (2009) - Published 5 May, 2009

Functional clustering algorithm for the analysis of dynamic network data

S. Feldt, J. Waddell, V. L. Hetrick, J. D. Berke, and M. Żochowski

Phys. Rev. E 79, 056104 (2009) - Published 7 May, 2009

Queue-length synchronization in communication networks

Satyam Mukherjee and Neelima Gupte

Phys. Rev. E 79, 056105 (2009) - Published 14 May, 2009

Emergence of loop structure in scale-free networks and dynamical consequences

Xiaojuan Ma, Liang Huang, Ying-Cheng Lai, and Zhigang Zheng

Phys. Rev. E 79, 056106 (2009) - Published 14 May, 2009

Diversity-optimized cooperation on complex networks

Han-Xin Yang, Wen-Xu Wang, Zhi-Xi Wu, Ying-Cheng Lai, and Bing-Hong Wang

Phys. Rev. E 79, 056107 (2009) - Published 19 May, 2009

Ultradiscrete optimal velocity model: A cellular-automaton model for traffic flow and linear instability of high-flux traffic

Masahiro Kanai, Shin Isojima, Katsuhiro Nishinari, and Tetsuji Tokihiro

Phys. Rev. E 79, 056108 (2009) - Published 19 May, 2009

Statistical analysis of the overnight and daytime return

Fengzhong Wang, Shwu-Jane Shieh, Shlomo Havlin, and H. Eugene Stanley

Phys. Rev. E 79, 056109 (2009) - Published 21 May, 2009

Waiting time dynamics of priority-queue networks

Byungjoon Min, K.-I. Goh, and I.-M. Kim

Phys. Rev. E 79, 056110 (2009) - Published 21 May, 2009

Approximating the largest eigenvalue of the modified adjacency matrix of networks with heterogeneous node biases

Edward Ott and Andrew Pomerance

Phys. Rev. E 79, 056111 (2009) - Published 22 May, 2009

Topological transition in dynamic complex networks

Nobuharu Kami and Hideo Ikeda

Phys. Rev. E 79, 056112 (2009) - Published 22 May, 2009

Self-sustained nonlinear waves in traffic flow

M. R. Flynn, A. R. Kasimov, J.-C. Nave, R. R. Rosales, and B. Seibold

Phys. Rev. E 79, 056113 (2009) - Published 26 May, 2009

Lévy-like diffusion in eye movements during spoken-language comprehension

Damian G. Stephen, Daniel Mirman, James S. Magnuson, and James A. Dixon

Phys. Rev. E 79, 056114 (2009) - Published 27 May, 2009

Critical behavior of the contact process in annealed scale-free networks

Jae Dong Noh and Hyunggyu Park

Phys. Rev. E 79, 056115 (2009) - Published 29 May, 2009

Chaos and pattern formation

Behavior of the current in the asymmetric quantum multibaker map

Leonardo Ermann, Gabriel G. Carlo, and Marcos Saraceno

Phys. Rev. E 79, 056201 (2009) - Published 1 May, 2009

Optimal Markov approximations and generalized embeddings

Detlef Holstein and Holger Kantz

Phys. Rev. E 79, 056202 (2009) - Published 4 May, 2009

Stationary pattern formation in a discrete excitable system with strong inhibitory coupling

Naoko Kurata, Hiroyuki Kitahata, Hitoshi Mahara, Atsushi Nomura, Hidetoshi Miike, and Tatsunari Sakurai

Phys. Rev. E 79, 056203 (2009) - Published 5 May, 2009

Intermittent outgassing through a non-Newtonian fluid

Thibaut Divoux, Eric Bertin, Valérie Vidal, and Jean-Christophe Géminard

Phys. Rev. E 79, 056204 (2009) - Published 6 May, 2009

Nontrivial spontaneous synchronization

R. Sumi, Z. Néda, A. Tunyagi, Sz. Boda, and Cs. Szász

Phys. Rev. E 79, 056205 (2009) - Published 6 May, 2009

Anticipatory synchronization with variable time delay and reset

G. Ambika and R. E. Amritkar

Phys. Rev. E 79, 056206 (2009) - Published 6 May, 2009

Synchronization of networks of chaotic units with time-delayed couplings

W. Kinzel, A. Englert, G. Reents, M. Zigzag, and I. Kanter

Phys. Rev. E 79, 056207 (2009) - Published 8 May, 2009

Modeling dynamics from only output data

Evan Monroig, Kazuyuki Aihara, and Yozo Fujino

Phys. Rev. E 79, 056208 (2009) - Published 8 May, 2009

Closer look at time averages of the logistic map at the edge of chaos

Ugur Tirnakli, Constantino Tsallis, and Christian Beck

Phys. Rev. E 79, 056209 (2009) - Published 11 May, 2009

Onset of colored-noise-induced synchronization in chaotic systems

Yan Wang, Ying-Cheng Lai, and Zhigang Zheng

Phys. Rev. E 79, 056210 (2009) - Published 12 May, 2009

Delocalization of wave packets in disordered nonlinear chains

Ch. Skokos, D. O. Krimer, S. Komineas, and S. Flach

Phys. Rev. E 79, 056211 (2009) - Published 12 May, 2009

Dynamical properties of an harmonic oscillator impacting a vibrating wall

O. F. de Alcantara Bonfim

Phys. Rev. E 79, 056212 (2009) - Published 13 May, 2009

Spontaneously periodic wave generation in coupled excitable media

Lei Zhang, Shengli Zhang, Huimin Tong, Dongsheng Lei, and Bambi Hu

Phys. Rev. E 79, 056213 (2009) - Published 13 May, 2009

Transition zone in controlling spatiotemporal chaos

Jihua Gao, Lingling Xie, Wei Zou, and Meng Zhan

Phys. Rev. E 79, 056214 (2009) - Published 14 May, 2009

Detection of barriers to cross-jet Lagrangian transport and its destruction in a meandering flow

M. V. Budyansky, M. Yu. Uleysky, and S. V. Prants

Phys. Rev. E 79, 056215 (2009) - Published 14 May, 2009

Galerkin analysis of light-induced patterns in the chlorine dioxide–iodine–malonic acid reaction-diffusion system

Pushpita Ghosh, Shrabani Sen, Syed Shahed Riaz, and Deb Shankar Ray

Phys. Rev. E 79, 056216 (2009) - Published 14 May, 2009

Semiclassical theory of nonlocal statistical measures: Residual Coulomb interactions

Denis Ullmo, Steven Tomsovic, and Arnd Bäcker

Phys. Rev. E 79, 056217 (2009) - Published 15 May, 2009

Monte Carlo method for adaptively estimating the unknown parameters and the dynamic state of chaotic systems

Inés P. Mariño, Joaquín Míguez, and Riccardo Meucci

Phys. Rev. E 79, 056218 (2009) - Published 15 May, 2009

Traveling excitable waves successively generated in a nonlinear proliferation system

Kenta Odagiri and Kazuo Takatsuka

Phys. Rev. E 79, 056219 (2009) - Published 18 May, 2009

Soliton dynamics at an interface between a uniform medium and a nonlinear optical lattice

Fatkhulla Kh. Abdullaev, Ravil M. Galimzyanov, Marijana Brtka, and Lauro Tomio

Phys. Rev. E 79, 056220 (2009) - Published 19 May, 2009

Pressure oscillations in a chemical garden

J. Pantaleone, A. Toth, D. Horvath, L. RoseFigura, W. Morgan, and J. Maselko

Phys. Rev. E 79, 056221 (2009) - Published 19 May, 2009

Deformed Gaussian-orthogonal-ensemble description of small-world networks

J. X. de Carvalho, Sarika Jalan, and M. S. Hussein

Phys. Rev. E 79, 056222 (2009) - Published 21 May, 2009

Statistics of Schmidt coefficients and the simulability of complex quantum systems

Hannah Venzl, Andrew J. Daley, Florian Mintert, and Andreas Buchleitner

Phys. Rev. E 79, 056223 (2009) - Published 26 May, 2009

Emergence of dissipative structures in current-carrying superconducting wires

G. A. Levin, P. N. Barnes, J. P. Rodriguez, J. A. Connors, and J. S. Bulmer

Phys. Rev. E 79, 056224 (2009) - Published 26 May, 2009

Anomalous scaling on a spatiotemporally chaotic attractor

Ralf W. Wittenberg and Ka-Fai Poon

Phys. Rev. E 79, 056225 (2009) - Published 26 May, 2009

Wave propagation through Cantor-set media: Chaos, scaling, and fractal structures

Kenta Esaki, Masatoshi Sato, and Mahito Kohmoto

Phys. Rev. E 79, 056226 (2009) - Published 29 May, 2009

Fluid dynamics

Lagrangian studies in convective turbulence

Jörg Schumacher

Phys. Rev. E 79, 056301 (2009) - Published 4 May, 2009

Monte Carlo simulation of thermal fluctuations below the onset of Rayleigh-Bénard convection

Jun Zhang and Jing Fan

Phys. Rev. E 79, 056302 (2009) - Published 4 May, 2009

Anomalous scaling and anisotropy in models of passively advected vector fields

Heikki Arponen

Phys. Rev. E 79, 056303 (2009) - Published 4 May, 2009

Cascades, thermalization, and eddy viscosity in helical Galerkin truncated Euler flows

G. Krstulovic, P. D. Mininni, M. E. Brachet, and A. Pouquet

Phys. Rev. E 79, 056304 (2009) - Published 6 May, 2009

Inclined layer Soret instabilities

A. Zebib and M. M. Bou-Ali

Phys. Rev. E 79, 056305 (2009) - Published 8 May, 2009

Intermittent dynamics in transient polymer networks under shear: Signs of self-organized criticality

Joris Sprakel, Evan Spruijt, Martien A. Cohen Stuart, Matthias A. J. Michels, and Jasper van der Gucht

Phys. Rev. E 79, 056306 (2009) - Published 12 May, 2009

Chiral sedimentation of extended objects in viscous media

Nathan W. Krapf, Thomas A. Witten, and Nathan C. Keim

Phys. Rev. E 79, 056307 (2009) - Published 12 May, 2009

Number of degrees of freedom of two-dimensional turbulence

Chuong V. Tran and Luke Blackbourn

Phys. Rev. E 79, 056308 (2009) - Published 14 May, 2009

Elemental transport coefficients in viscous plasma flows near local thermodynamic equilibrium

Alessio Orsini and Elena V. Kustova

Phys. Rev. E 79, 056309 (2009) - Published 14 May, 2009

Suppression of instabilities in multiphase flow by geometric confinement

Katherine J. Humphry, Armand Ajdari, Alberto Fernández-Nieves, Howard A. Stone, and David A. Weitz

Phys. Rev. E 79, 056310 (2009) - Published 18 May, 2009

Friction factor for turbulent flow in rough pipes from Heisenberg’s closure hypothesis

Esteban Calzetta

Phys. Rev. E 79, 056311 (2009) - Published 22 May, 2009

Time correlation functions in a similarity approximation for one-dimensional turbulence

Makoto Okamura and Hazime Mori

Phys. Rev. E 79, 056312 (2009) - Published 26 May, 2009

Nonlinear traveling waves in a multilayer system

Ilya B. Simanovskii

Phys. Rev. E 79, 056313 (2009) - Published 26 May, 2009

Stochastic dynamics of micron-scale doubly clamped beams in a viscous fluid

M. M. Villa and M. R. Paul

Phys. Rev. E 79, 056314 (2009) - Published 28 May, 2009

Plasma physics

Pattern dynamics and spatiotemporal chaos in the quantum Zakharov equations

A. P. Misra and P. K. Shukla

Phys. Rev. E 79, 056401 (2009) - Published 4 May, 2009

Cylindrical and spherical ion-acoustic envelope solitons in multicomponent plasmas with positrons

R. Sabry, W. M. Moslem, P. K. Shukla, and H. Saleem

Phys. Rev. E 79, 056402 (2009) - Published 6 May, 2009

Correlation effects on the temperature-relaxation rates in dense plasmas

Jérôme Daligault and Guy Dimonte

Phys. Rev. E 79, 056403 (2009) - Published 13 May, 2009

Implosion dynamics and x-ray generation in small-diameter wire-array Z pinches

V. V. Ivanov, V. I. Sotnikov, J. M. Kindel, P. Hakel, R. C. Mancini, A. L. Astanovitskiy, A. Haboub, S. D. Altemara, A. P. Shevelko, E. D. Kazakov, and P. V. Sasorov

Phys. Rev. E 79, 056404 (2009) - Published 21 May, 2009

Tracking propagation of ultrashort intense laser pulses in gases via probing of ionization

L. A. Gizzi, S. Betti, M. Galimberti, A. Giulietti, D. Giulietti, L. Labate, T. Levato, P. Tomassini, P. Monot, T. Ceccotti, P. De Oliveira, and Ph. Martin

Phys. Rev. E 79, 056405 (2009) - Published 26 May, 2009

Wave-breaking limits for nonquasistatic oscillations in a warm one-dimensional electron plasma

R. M. G. M. Trines

Phys. Rev. E 79, 056406 (2009) - Published 29 May, 2009

Classical physics

Strain waves, earthquakes, slow earthquakes, and afterslip in the framework of the Frenkel-Kontorova model

N. I. Gershenzon, V. G. Bykov, and G. Bambakidis

Phys. Rev. E 79, 056601 (2009) - Published 6 May, 2009

Darboux transformation for a generalized Hirota-Satsuma coupled Korteweg–de Vries equation

Xianguo Geng, Hongfeng Ren, and Guoliang He

Phys. Rev. E 79, 056602 (2009) - Published 6 May, 2009

Generalized optical theorem for surface waves and layered media

David Halliday and Andrew Curtis

Phys. Rev. E 79, 056603 (2009) - Published 8 May, 2009

Collapse and folding of pressurized rings in two dimensions

Eleni Katifori, Silas Alben, and David R. Nelson

Phys. Rev. E 79, 056604 (2009) - Published 8 May, 2009

Painlevé-integrability of a (2+1)-dimensional reaction-diffusion equation: Exact solutions and their interactions

Kuetche Kamgang Victor, Bouetou Bouetou Thomas, and Timoleon Crepin Kofane

Phys. Rev. E 79, 056605 (2009) - Published 11 May, 2009

Nonlinear layered lattice model and generalized solitary waves in imperfectly bonded structures

Karima R. Khusnutdinova, Alexander M. Samsonov, and Alexey S. Zakharov

Phys. Rev. E 79, 056606 (2009) - Published 13 May, 2009

Bi-Hamiltonian representation of Stäckel systems

Maciej Błaszak

Phys. Rev. E 79, 056607 (2009) - Published 18 May, 2009

Enhancement of nonlinear effects at the degenerate band edge of two-dimensional photonic crystals

M. Astic, Ph. Delaye, R. Frey, and G. Roosen

Phys. Rev. E 79, 056608 (2009) - Published 19 May, 2009

Longitudinal oscillations and flights of the string pendulum driven by a periodic force

A. Arinstein

Phys. Rev. E 79, 056609 (2009) - Published 22 May, 2009

Engineering integrable nonautonomous nonlinear Schrödinger equations

Xu-Gang He, Dun Zhao, Lin Li, and Hong-Gang Luo

Phys. Rev. E 79, 056610 (2009) - Published 28 May, 2009

Discrete Lange-Newell criterion for dissipative systems

Fabien II Ndzana, Alidou Mohamadou, and Timoleon Crépin Kofané

Phys. Rev. E 79, 056611 (2009) - Published 29 May, 2009

Computational physics

Theoretical considerations on the free-surface role in the smoothed-particle-hydrodynamics model

Andrea Colagrossi, Matteo Antuono, and David Le Touzé

Phys. Rev. E 79, 056701 (2009) - Published 6 May, 2009

Computation of the response functions of spiral waves in active media

I. V. Biktasheva, D. Barkley, V. N. Biktashev, G. V. Bordyugov, and A. J. Foulkes

Phys. Rev. E 79, 056702 (2009) - Published 11 May, 2009

Two-fluid approach for direct numerical simulation of particle-laden turbulent flows at small Stokes numbers

Babak Shotorban and S. Balachandar

Phys. Rev. E 79, 056703 (2009) - Published 14 May, 2009

Acceleration of quantum optimal control theory algorithms with mixing strategies

Alberto Castro and E. K. U. Gross

Phys. Rev. E 79, 056704 (2009) - Published 15 May, 2009

Numerical solutions of the time-dependent Schrödinger equation: Reduction of the error due to space discretization

Hezhu Shao (邵和助) and Zhongcheng Wang (汪仲诚)

Phys. Rev. E 79, 056705 (2009) - Published 21 May, 2009

Rupture of a ferrofluid droplet in external magnetic fields using a single-component lattice Boltzmann model for nonideal fluids

G. Falcucci, G. Chiatti, S. Succi, A. A. Mohamad, and A. Kuzmin

Phys. Rev. E 79, 056706 (2009) - Published 21 May, 2009

Smoothed particle hydrodynamic model for viscoelastic fluids with thermal fluctuations

Adolfo Vázquez-Quesada, Marco Ellero, and Pep Español

Phys. Rev. E 79, 056707 (2009) - Published 22 May, 2009

Lattice Uehling-Uhlenbeck Boltzmann-Bhatnagar-Gross-Krook hydrodynamics of quantum gases

Jaw-Yen Yang and Li-Hsin Hung

Phys. Rev. E 79, 056708 (2009) - Published 22 May, 2009

Radiation boundary conditions for the numerical solution of the three-dimensional time-dependent Schrödinger equation with a localized interaction

M. Heinen and H.-J. Kull

Phys. Rev. E 79, 056709 (2009) - Published 26 May, 2009

Enslaved phase-separation fronts in one-dimensional binary mixtures

E. M. Foard and A. J. Wagner

Phys. Rev. E 79, 056710 (2009) - Published 26 May, 2009

Variance-reduced particle simulation of the Boltzmann transport equation in the relaxation-time approximation

Gregg A. Radtke and Nicolas G. Hadjiconstantinou

Phys. Rev. E 79, 056711 (2009) - Published 26 May, 2009

BRIEF REPORTS

Interdisciplinary physics

Secant-hyperbolic instability in a reaction-diffusion system

Shrabani Sen and Deb Shankar Ray

Phys. Rev. E 79, 057101 (2009) - Published 8 May, 2009

Phase reversal in the Selkov model with inhomogeneous influx

A. I. Lavrova, L. Schimansky-Geier, and E. B. Postnikov

Phys. Rev. E 79, 057102 (2009) - Published 20 May, 2009

Chaos and pattern formation

Proposed central limit behavior in deterministic dynamical systems

Peter Grassberger

Phys. Rev. E 79, 057201 (2009) - Published 11 May, 2009

Using detrended fluctuation analysis for lagged correlation analysis of nonstationary signals

Jose Alvarez-Ramirez, Eduardo Rodriguez, and Juan Carlos Echeverria

Phys. Rev. E 79, 057202 (2009) - Published 20 May, 2009

Plasma physics

Positive and negative streamers in air: Velocity-diameter relation

G. V. Naidis

Phys. Rev. E 79, 057401 (2009) - Published 13 May, 2009

Computational physics

Relationship between Hirsch-Fye and weak-coupling diagrammatic quantum Monte Carlo methods

K. Mikelsons, A. Macridin, and M. Jarrell

Phys. Rev. E 79, 057701 (2009) - Published 13 May, 2009

Distance of closest approach of two arbitrary hard ellipsoids

Xiaoyu Zheng, Wilder Iglesias, and Peter Palffy-Muhoray

Phys. Rev. E 79, 057702 (2009) - Published 20 May, 2009

ERRATA

Erratum: Nanorheology of viscoelastic shells: Applications to viral capsids [Phys. Rev. E. 77, 031921 (2008)]

Tatiana Kuriabova and Alex J. Levine

Phys. Rev. E 79, 059901 (2009) - Published 29 May, 2009

Sign In to Your Journals Account

Filter

Filter

Article Lookup

Enter a citation