Volume 97, Issue 3

March 2018

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EDITORIALS AND ANNOUNCEMENTS

Announcement: The Irwin Oppenheim Award

Eli Ben-Naim

Phys. Rev. E 97, 030001 (2018) - Published 1 March, 2018

HIGHLIGHTED ARTICLES

EDITORS' SUGGESTION

Heat transport in oscillator chains with long-range interactions coupled to thermal reservoirs

Stefano Iubini, Pierfrancesco Di Cintio, Stefano Lepri, Roberto Livi, and Lapo Casetti

Phys. Rev. E 97, 032102 (2018) - Published 5 March, 2018

The authors investigate heat propagation in one-dimensional chains of long-range interacting oscillators connected to thermal baths. They study two different models and find that for nonadditive interactions, heat transport shows a mean-field-like behavior irrespective of the particular details of the interactions.

EDITORS' SUGGESTION

Transition to collective oscillations in finite Kuramoto ensembles

Franziska Peter and Arkady Pikovsky

Phys. Rev. E 97, 032310 (2018) - Published 20 March, 2018

This paper addresses the issue of collective modes in a finite ensemble of oscillators in the Kuramoto model. The authors use the minimum of the order-parameter amplitude as the characteristic parameter for the existence of a collective mode and study how it is influenced by the statistical properties of the ensemble. Interestingly, the results continue to hold in the thermodynamic limit of an infinite ensemble.

EDITORS' SUGGESTION

Impact of hydrodynamic interactions on protein folding rates depends on temperature

Fabio C. Zegarra, Dirar Homouz, Yossi Eliaz, Andrei G. Gasic, and Margaret S. Cheung

Phys. Rev. E 97, 032402 (2018) - Published 5 March, 2018

This paper examines the influence of hydrodynamic interactions on protein folding. The authors take two model proteins and perform Brownian dynamics simulations with a coarse-grained approach. Their results suggest that the long-range hydrodynamic interactions favor protein folding below the folding temperature, but retard it above that temperature

EDITORS' SUGGESTION

Chemical event chain model of coupled genetic oscillators

David J. Jörg, Luis G. Morelli, and Frank Jülicher

Phys. Rev. E 97, 032409 (2018) - Published 19 March, 2018

The dynamics of oscillators in biological systems can involve chains of events with many noisy steps. In this work the authors investigate how precision and synchronization can be increased by coupling two such genetic oscillators. Their findings may shed light on the operating regime of cellular genetic oscillator systems in which precise timing is vital, such as circadian clocks.

EDITORS' SUGGESTION

How nonuniform contact profiles of T cell receptors modulate thymic selection outcomes

Hanrong Chen, Arup K. Chakraborty, and Mehran Kardar

Phys. Rev. E 97, 032413 (2018) - Published 22 March, 2018

T cells undergo a selection process so that, as part of the immune system, they recognize foreign antigens, yet tolerate self-peptides. The authors show that the outcome of the selection process not only depends on the amino-acid sequence of the T cell, but also on its physical structure which determines the strength of each amino-acid contact.

EDITORS' SUGGESTION

Normal stresses in semiflexible polymer hydrogels

M. Vahabi, Bart E. Vos, Henri C. G. de Cagny, Daniel Bonn, Gijsje H. Koenderink, and F. C. MacKintosh

Phys. Rev. E 97, 032418 (2018) - Published 28 March, 2018

The authors extend and refine their model for the stress behavior of biopolymer gels. The microscopic model predicts time-dependent stresses and transient behavior which agree well with experimental measurements, including a behavior under shear that is opposite to that of most synthetic gels.

EDITORS' SUGGESTION

Barriers to front propagation in laminar, three-dimensional fluid flows

Minh Doan, J. J. Simons, Katherine Lilienthal, Tom Solomon, and Kevin A. Mitchell

Phys. Rev. E 97, 033111 (2018) - Published 26 March, 2018

This paper presents an experimental study of front propagation in three-dimensional flows, showing evidence of one-way barriers that hinder the motion of the reaction fronts. In order to explain their results, the authors extend the burning-invariant-manifold theory to three dimensions, which enables them to capture the main features of the experimental results.

RAPID COMMUNICATIONS

Statistical Physics

RAPID COMMUNICATION

Efficient thermal diode with ballistic spacer

Shunda Chen, Davide Donadio, Giuliano Benenti, and Giulio Casati

Phys. Rev. E 97, 030101(R) (2018) - Published 8 March, 2018

RAPID COMMUNICATION

Glassy phase in quenched disordered crystalline membranes

O. Coquand, K. Essafi, J.-P. Kownacki, and D. Mouhanna

Phys. Rev. E 97, 030102(R) (2018) - Published 8 March, 2018

RAPID COMMUNICATION

Nonequilibrium two-dimensional Ising model with stationary uphill diffusion

Matteo Colangeli, Cristian Giardinà, Claudio Giberti, and Cecilia Vernia

Phys. Rev. E 97, 030103(R) (2018) - Published 23 March, 2018

RAPID COMMUNICATION

Different approach to the modeling of nonfree particle diffusion

Niels Buhl

Phys. Rev. E 97, 030104(R) (2018) - Published 30 March, 2018

Nonlinear Dynamics and Chaos

RAPID COMMUNICATION

Periodic sequence of stabilized wave segments in an excitable medium

V. S. Zykov and E. Bodenschatz

Phys. Rev. E 97, 030201(R) (2018) - Published 9 March, 2018

RAPID COMMUNICATION

Local box-counting dimensions of discrete quantum eigenvalue spectra: Analytical connection to quantum spectral statistics

Jamal Sakhr and John M. Nieminen

Phys. Rev. E 97, 030202(R) (2018) - Published 13 March, 2018

Networks and Complex Systems

RAPID COMMUNICATION

Inhibition delay increases neural network capacity through Stirling transform

Alain Nogaret and Alastair King

Phys. Rev. E 97, 030301(R) (2018) - Published 9 March, 2018

ARTICLES

Statistical Physics

Shielding property for thermal equilibrium states in the quantum Ising model

N. S. Móller, A. L. de Paula, Jr., and R. C. Drumond

Phys. Rev. E 97, 032101 (2018) - Published 2 March, 2018

EDITORS' SUGGESTION

Heat transport in oscillator chains with long-range interactions coupled to thermal reservoirs

Stefano Iubini, Pierfrancesco Di Cintio, Stefano Lepri, Roberto Livi, and Lapo Casetti

Phys. Rev. E 97, 032102 (2018) - Published 5 March, 2018

Size effects in finite systems with long-range interactions

E. S. Loscar and C. M. Horowitz

Phys. Rev. E 97, 032103 (2018) - Published 6 March, 2018

Fractal dimension of interfaces in Edwards-Anderson spin glasses for up to six space dimensions

Wenlong Wang, M. A. Moore, and Helmut G. Katzgraber

Phys. Rev. E 97, 032104 (2018) - Published 7 March, 2018

Absorbing phase transitions in deterministic fixed-energy sandpile models

Su-Chan Park (박수찬)

Phys. Rev. E 97, 032105 (2018) - Published 8 March, 2018

Ferromagnetic Potts models with multisite interaction

Nir Schreiber, Reuven Cohen, and Simi Haber

Phys. Rev. E 97, 032106 (2018) - Published 8 March, 2018

Thermal decay of a metastable state: Influence of rescattering on the quasistationary dynamical rate

M. V. Chushnyakova and I. I. Gontchar

Phys. Rev. E 97, 032107 (2018) - Published 12 March, 2018

Statistical investigation of avalanches of three-dimensional small-world networks and their boundary and bulk cross-sections

M. N. Najafi and H. Dashti-Naserabadi

Phys. Rev. E 97, 032108 (2018) - Published 12 March, 2018

Mapping of uncertainty relations between continuous and discrete time

Davide Chiuchiù and Simone Pigolotti

Phys. Rev. E 97, 032109 (2018) - Published 13 March, 2018

Derivation of Markov processes that violate detailed balance

Julian Lee

Phys. Rev. E 97, 032110 (2018) - Published 14 March, 2018

Effect of multiplicative noise on stationary stochastic process

A. V. Kargovsky, A. Yu. Chikishev, and O. A. Chichigina

Phys. Rev. E 97, 032112 (2018) - Published 14 March, 2018

Unifying model for random matrix theory in arbitrary space dimensions

Giovanni M. Cicuta, Johannes Krausser, Rico Milkus, and Alessio Zaccone

Phys. Rev. E 97, 032113 (2018) - Published 14 March, 2018

Zero-crossing statistics for non-Markovian time series

Markus Nyberg, Ludvig Lizana, and Tobias Ambjörnsson

Phys. Rev. E 97, 032114 (2018) - Published 14 March, 2018

Least-rattling feedback from strong time-scale separation

Pavel Chvykov and Jeremy England

Phys. Rev. E 97, 032115 (2018) - Published 15 March, 2018

Cooperativity in plastic crystals

Marco Pieruccini and Elpidio Tombari

Phys. Rev. E 97, 032116 (2018) - Published 16 March, 2018

Emergence of nonwhite noise in Langevin dynamics with magnetic Lorentz force

Hyun-Myung Chun, Xavier Durang, and Jae Dong Noh

Phys. Rev. E 97, 032117 (2018) - Published 16 March, 2018

Statistical physics of medical diagnostics: Study of a probabilistic model

Alireza Mashaghi and Abolfazl Ramezanpour

Phys. Rev. E 97, 032118 (2018) - Published 16 March, 2018

Deep neural networks for direct, featureless learning through observation: The case of two-dimensional spin models

Kyle Mills and Isaac Tamblyn

Phys. Rev. E 97, 032119 (2018) - Published 16 March, 2018

Jamming and condensation in one-dimensional driven flow

Hyungjoon Soh, Meesoon Ha, and Hawoong Jeong

Phys. Rev. E 97, 032120 (2018) - Published 16 March, 2018

Limits of the memory coefficient in measuring correlated bursts

Hang-Hyun Jo and Takayuki Hiraoka

Phys. Rev. E 97, 032121 (2018) - Published 16 March, 2018

Sampling rare fluctuations of discrete-time Markov chains

Stephen Whitelam

Phys. Rev. E 97, 032122 (2018) - Published 19 March, 2018

Rare behavior of growth processes via umbrella sampling of trajectories

Katherine Klymko, Phillip L. Geissler, Juan P. Garrahan, and Stephen Whitelam

Phys. Rev. E 97, 032123 (2018) - Published 19 March, 2018

Large-deviation theory for diluted Wishart random matrices

Isaac Pérez Castillo and Fernando L. Metz

Phys. Rev. E 97, 032124 (2018) - Published 19 March, 2018

Nonequilibrium forces following quenches in active and thermal matter

Christian M. Rohwer, Alexandre Solon, Mehran Kardar, and Matthias Krüger

Phys. Rev. E 97, 032125 (2018) - Published 20 March, 2018

Fractional superstatistics from a kinetic approach

Kamel Ourabah and Mouloud Tribeche

Phys. Rev. E 97, 032126 (2018) - Published 21 March, 2018

Brownian motion surviving in the unstable cubic potential and the role of Maxwell's demon

Luca Ornigotti, Artem Ryabov, Viktor Holubec, and Radim Filip

Phys. Rev. E 97, 032127 (2018) - Published 23 March, 2018

Distribution of diameters for Erdős-Rényi random graphs

A. K. Hartmann and M. Mézard

Phys. Rev. E 97, 032128 (2018) - Published 23 March, 2018

Diffusive instabilities in a hyperbolic activator-inhibitor system with superdiffusion

Alain Mvogo, Jorge E. Macías-Díaz, and Timoléon Crépin Kofané

Phys. Rev. E 97, 032129 (2018) - Published 23 March, 2018

Asymmetric simple exclusion process with position-dependent hopping rates: Phase diagram from boundary-layer analysis

Sutapa Mukherji

Phys. Rev. E 97, 032130 (2018) - Published 26 March, 2018

Phase transitions in a system of hard Y-shaped particles on the triangular lattice

Dipanjan Mandal, Trisha Nath, and R. Rajesh

Phys. Rev. E 97, 032131 (2018) - Published 26 March, 2018

Voronoi glass-forming liquids: A structural study

C. Ruscher, J. Baschnagel, and J. Farago

Phys. Rev. E 97, 032132 (2018) - Published 27 March, 2018

Random matrices and condensation into multiple states

Sina Sadeghi and Andreas Engel

Phys. Rev. E 97, 032133 (2018) - Published 27 March, 2018

Non-Markovian dynamics of fermionic and bosonic systems coupled to several heat baths

A. A. Hovhannisyan, V. V. Sargsyan, G. G. Adamian, N. V. Antonenko, and D. Lacroix

Phys. Rev. E 97, 032134 (2018) - Published 28 March, 2018

Relaxation dynamics of closed diffusive systems with infinitesimal Langmuir kinetics

Jun Sato and Katsuhiro Nishinari

Phys. Rev. E 97, 032135 (2018) - Published 28 March, 2018

On the number of Bose-selected modes in driven-dissipative ideal Bose gases

Alexander Schnell, Roland Ketzmerick, and André Eckardt

Phys. Rev. E 97, 032136 (2018) - Published 28 March, 2018

Analytical method for analysis of electromagnetic scattering from inhomogeneous spherical structures using duality principles

M. Kiani, A. Abdolali, and M. Safari

Phys. Rev. E 97, 032137 (2018) - Published 28 March, 2018

Modeling long correlation times using additive binary Markov chains: Applications to wind generation time series

Juliane Weber, Christopher Zachow, and Dirk Witthaut

Phys. Rev. E 97, 032138 (2018) - Published 28 March, 2018

Critical properties of unlimited gliding: Unexpected flocking behavior driven by the exchange of information

Marta Bigus-Kwiatkowska, Agata Fronczak, and Piotr Fronczak

Phys. Rev. E 97, 032139 (2018) - Published 28 March, 2018

Frustration-induced internal stresses are responsible for quasilocalized modes in structural glasses

Edan Lerner and Eran Bouchbinder

Phys. Rev. E 97, 032140 (2018) - Published 30 March, 2018

Nonlinear Dynamics and Chaos

Attractor hopping between polarization dynamical states in a vertical-cavity surface-emitting laser subject to parallel optical injection

Florian Denis-le Coarer, Ana Quirce, Angel Valle, Luis Pesquera, Miguel A. Rodríguez, Krassimir Panajotov, and Marc Sciamanna

Phys. Rev. E 97, 032201 (2018) - Published 2 March, 2018

Transition between inverse and direct energy cascades in multiscale optical turbulence

V. M. Malkin and N. J. Fisch

Phys. Rev. E 97, 032202 (2018) - Published 6 March, 2018

Investigation of a chaotic thermostat

G. J. Morales

Phys. Rev. E 97, 032203 (2018) - Published 8 March, 2018

Spatial solitons and stability in the one-dimensional and the two-dimensional generalized nonlinear Schrödinger equation with fourth-order diffraction and parity-time-symmetric potentials

C. G. L. Tiofack, F. II Ndzana, A. Mohamadou, and T. C. Kofane

Phys. Rev. E 97, 032204 (2018) - Published 9 March, 2018

Transition from normal to ballistic diffusion in a one-dimensional impact system

André L. P. Livorati, Tiago Kroetz, Carl P. Dettmann, Iberê L. Caldas, and Edson D. Leonel

Phys. Rev. E 97, 032205 (2018) - Published 9 March, 2018

Information-theoretic model selection for optimal prediction of stochastic dynamical systems from data

David Darmon

Phys. Rev. E 97, 032206 (2018) - Published 16 March, 2018

Distinct collective states due to trade-off between attractive and repulsive couplings

K. Sathiyadevi, V. K. Chandrasekar, D. V. Senthilkumar, and M. Lakshmanan

Phys. Rev. E 97, 032207 (2018) - Published 19 March, 2018

Exponentially decaying interaction potential of cavity solitons

Shayesteh Rahmani Anbardan, Cristina Rimoldi, Reza Kheradmand, Giovanna Tissoni, and Franco Prati

Phys. Rev. E 97, 032208 (2018) - Published 20 March, 2018

Amplitude-dependent topological edge states in nonlinear phononic lattices

Raj Kumar Pal, Javier Vila, Michael Leamy, and Massimo Ruzzene

Phys. Rev. E 97, 032209 (2018) - Published 21 March, 2018

Autoresonant excitation of Bose-Einstein condensates

S. V. Batalov, A. G. Shagalov, and L. Friedland

Phys. Rev. E 97, 032210 (2018) - Published 21 March, 2018

Constructing Hopf bifurcation lines for the stability of nonlinear systems with two time delays

Romain Modeste Nguimdo

Phys. Rev. E 97, 032211 (2018) - Published 21 March, 2018

Dark gap solitons in exciton-polariton condensates in a periodic potential

Szu-Cheng Cheng and Ting-Wei Chen

Phys. Rev. E 97, 032212 (2018) - Published 22 March, 2018

Clusters in nonsmooth oscillator networks

Rachel Nicks, Lucie Chambon, and Stephen Coombes

Phys. Rev. E 97, 032213 (2018) - Published 23 March, 2018

Discretization-dependent model for weakly connected excitable media

Pedro André Arroyo, Sergio Alonso, and Rodrigo Weber dos Santos

Phys. Rev. E 97, 032214 (2018) - Published 23 March, 2018

Extreme events and single-pulse spatial patterns observed in a self-pulsing all-solid-state laser

Carlos Bonazzola, Alejandro Hnilo, Marcelo Kovalsky, and Jorge Tredicce

Phys. Rev. E 97, 032215 (2018) - Published 26 March, 2018

Spatiotemporal dynamics of the covariant Lyapunov vectors of chaotic convection

M. Xu and M. R. Paul

Phys. Rev. E 97, 032216 (2018) - Published 27 March, 2018

Floquet states of a kicked particle in a singular potential: Exponential and power-law profiles

Sanku Paul and M. S. Santhanam

Phys. Rev. E 97, 032217 (2018) - Published 27 March, 2018

Hydrodynamic optical soliton tunneling

P. Sprenger, M. A. Hoefer, and G. A. El

Phys. Rev. E 97, 032218 (2018) - Published 29 March, 2018

Directed motion of spheres induced by unbiased driving forces in viscous fluids beyond the Stokes' law regime

Jesús Casado-Pascual

Phys. Rev. E 97, 032219 (2018) - Published 30 March, 2018

Networks and Complex Systems

Algorithmic detectability threshold of the stochastic block model

Tatsuro Kawamoto

Phys. Rev. E 97, 032301 (2018) - Published 2 March, 2018

Exact analytical solution of irreversible binary dynamics on networks

Edward Laurence, Jean-Gabriel Young, Sergey Melnik, and Louis J. Dubé

Phys. Rev. E 97, 032302 (2018) - Published 2 March, 2018

Tuning the overlap and the cross-layer correlations in two-layer networks: Application to a susceptible-infectious-recovered model with awareness dissemination

David Juher and Joan Saldaña

Phys. Rev. E 97, 032303 (2018) - Published 9 March, 2018

Collective conflict resolution in groups on the move

Itai Pinkoviezky, Iain D. Couzin, and Nir S. Gov

Phys. Rev. E 97, 032304 (2018) - Published 12 March, 2018

Optimal stabilization of Boolean networks through collective influence

Jiannan Wang, Sen Pei, Wei Wei, Xiangnan Feng, and Zhiming Zheng

Phys. Rev. E 97, 032305 (2018) - Published 13 March, 2018

Group percolation in interdependent networks

Zexun Wang, Dong Zhou, and Yanqing Hu

Phys. Rev. E 97, 032306 (2018) - Published 16 March, 2018

Master stability functions reveal diffusion-driven pattern formation in networks

Andreas Brechtel, Philipp Gramlich, Daniel Ritterskamp, Barbara Drossel, and Thilo Gross

Phys. Rev. E 97, 032307 (2018) - Published 19 March, 2018

Interplay between cost and benefits triggers nontrivial vaccination uptake

Benjamin Steinegger, Alessio Cardillo, Paolo De Los Rios, Jesús Gómez-Gardeñes, and Alex Arenas

Phys. Rev. E 97, 032308 (2018) - Published 19 March, 2018

Geometric evolution of complex networks with degree correlations

Charles Murphy, Antoine Allard, Edward Laurence, Guillaume St-Onge, and Louis J. Dubé

Phys. Rev. E 97, 032309 (2018) - Published 19 March, 2018

EDITORS' SUGGESTION

Transition to collective oscillations in finite Kuramoto ensembles

Franziska Peter and Arkady Pikovsky

Phys. Rev. E 97, 032310 (2018) - Published 20 March, 2018

Individual heterogeneity generating explosive system network dynamics

Pedro D. Manrique and Neil F. Johnson

Phys. Rev. E 97, 032311 (2018) - Published 21 March, 2018

Critical neural networks with short- and long-term plasticity

L. Michiels van Kessenich, M. Luković, L. de Arcangelis, and H. J. Herrmann

Phys. Rev. E 97, 032312 (2018) - Published 23 March, 2018

Using persistent homology to reveal hidden covariates in systems governed by the kinetic Ising model

Gard Spreemann, Benjamin Dunn, Magnus Bakke Botnan, and Nils A. Baas

Phys. Rev. E 97, 032313 (2018) - Published 26 March, 2018

Renormalization-group study of the Nagel-Schreckenberg model

Han Kheng Teoh and Ee Hou Yong

Phys. Rev. E 97, 032314 (2018) - Published 26 March, 2018

Universality and correlations in individuals wandering through an online extremist space

Z. Cao, M. Zheng, Y. Vorobyeva, C. Song, and N. F. Johnson

Phys. Rev. E 97, 032315 (2018) - Published 26 March, 2018

Complex network view of evolving manifolds

Diamantino C. da Silva, Ginestra Bianconi, Rui A. da Costa, Sergey N. Dorogovtsev, and José F. F. Mendes

Phys. Rev. E 97, 032316 (2018) - Published 27 March, 2018

Sparse dynamical Boltzmann machine for reconstructing complex networks with binary dynamics

Yu-Zhong Chen and Ying-Cheng Lai

Phys. Rev. E 97, 032317 (2018) - Published 28 March, 2018

Detection of intensity bursts using Hawkes processes: An application to high-frequency financial data

Marcello Rambaldi, Vladimir Filimonov, and Fabrizio Lillo

Phys. Rev. E 97, 032318 (2018) - Published 29 March, 2018

Effect of form of obstacle on speed of crowd evacuation

Ryosuke Yano

Phys. Rev. E 97, 032319 (2018) - Published 29 March, 2018

Universal principles governing multiple random searchers on complex networks: The logarithmic growth pattern and the harmonic law

Tongfeng Weng, Jie Zhang, Michael Small, Bahareh Harandizadeh, and Pan Hui

Phys. Rev. E 97, 032320 (2018) - Published 30 March, 2018

Biological Physics

Post-transcriptional bursting in genes regulated by small RNA molecules

Guillermo Rodrigo

Phys. Rev. E 97, 032401 (2018) - Published 2 March, 2018

EDITORS' SUGGESTION

Impact of hydrodynamic interactions on protein folding rates depends on temperature

Fabio C. Zegarra, Dirar Homouz, Yossi Eliaz, Andrei G. Gasic, and Margaret S. Cheung

Phys. Rev. E 97, 032402 (2018) - Published 5 March, 2018

Simple and universal model for electron-impact ionization of complex biomolecules

Hong Qi Tan, Zhaohong Mi, and Andrew A. Bettiol

Phys. Rev. E 97, 032403 (2018) - Published 7 March, 2018

Effect of ac electric field on the dynamics of a vesicle under shear flow in the small deformation regime

Kumari Priti Sinha and Rochish M. Thaokar

Phys. Rev. E 97, 032404 (2018) - Published 12 March, 2018

Optimal entrainment of circadian clocks in the presence of noise

Michele Monti, David K. Lubensky, and Pieter Rein ten Wolde

Phys. Rev. E 97, 032405 (2018) - Published 12 March, 2018

Early-warning signals of critical transition: Effect of extrinsic noise

Shanshan Qin and Chao Tang

Phys. Rev. E 97, 032406 (2018) - Published 13 March, 2018

Slowdown of surface diffusion during early stages of bacterial colonization

T. Vourc'h, H. Peerhossaini, J. Léopoldès, A. Méjean, F. Chauvat, and C. Cassier-Chauvat

Phys. Rev. E 97, 032407 (2018) - Published 14 March, 2018

Actin filaments growing against an elastic membrane: Effect of membrane tension

Raj Kumar Sadhu and Sakuntala Chatterjee

Phys. Rev. E 97, 032408 (2018) - Published 16 March, 2018

EDITORS' SUGGESTION

Chemical event chain model of coupled genetic oscillators

David J. Jörg, Luis G. Morelli, and Frank Jülicher

Phys. Rev. E 97, 032409 (2018) - Published 19 March, 2018

Assay based on electrical impedance spectroscopy to discriminate between normal and cancerous mammalian cells

Fabián Eduardo Giana, Fabián José Bonetto, and Mariela Inés Bellotti

Phys. Rev. E 97, 032410 (2018) - Published 19 March, 2018

Asymmetry in cilia configuration induces hydrodynamic phase locking

Keiji Okumura, Seiya Nishikawa, Toshihiro Omori, Takuji Ishikawa, and Atsuko Takamatsu

Phys. Rev. E 97, 032411 (2018) - Published 20 March, 2018

Energy required to pinch a DNA plectoneme

Céline Barde, Nicolas Destainville, and Manoel Manghi

Phys. Rev. E 97, 032412 (2018) - Published 21 March, 2018

EDITORS' SUGGESTION

How nonuniform contact profiles of T cell receptors modulate thymic selection outcomes

Hanrong Chen, Arup K. Chakraborty, and Mehran Kardar

Phys. Rev. E 97, 032413 (2018) - Published 22 March, 2018

Determination of prestress and elastic properties of virus capsids

Ankush Aggarwal

Phys. Rev. E 97, 032414 (2018) - Published 26 March, 2018

How directional mobility affects coexistence in rock-paper-scissors models

P. P. Avelino, D. Bazeia, L. Losano, J. Menezes, B. F. de Oliveira, and M. A. Santos

Phys. Rev. E 97, 032415 (2018) - Published 26 March, 2018

Modeling persistence of motion in a crowded environment: The diffusive limit of excluding velocity-jump processes

Enrico Gavagnin and Christian A. Yates

Phys. Rev. E 97, 032416 (2018) - Published 26 March, 2018

Encounter times of chromatin loci influenced by polymer decondensation

A. Amitai and D. Holcman

Phys. Rev. E 97, 032417 (2018) - Published 27 March, 2018

EDITORS' SUGGESTION

Normal stresses in semiflexible polymer hydrogels

M. Vahabi, Bart E. Vos, Henri C. G. de Cagny, Daniel Bonn, Gijsje H. Koenderink, and F. C. MacKintosh

Phys. Rev. E 97, 032418 (2018) - Published 28 March, 2018

Reconstructing free-energy landscapes for nonequilibrium periodic potentials

N. J. López-Alamilla, Michael W. Jack, and K. J. Challis

Phys. Rev. E 97, 032419 (2018) - Published 28 March, 2018

Optimal methylation noise for best chemotactic performance of E. coli

Subrata Dev and Sakuntala Chatterjee

Phys. Rev. E 97, 032420 (2018) - Published 29 March, 2018

Evaluation of bending modulus of lipid bilayers using undulation and orientation analysis

Adarsh K. Chaurasia, Andrew M. Rukangu, Michael K. Philen, Gary D. Seidel, and Eric C. Freeman

Phys. Rev. E 97, 032421 (2018) - Published 30 March, 2018

Effects of nucleosome stability on remodeler-catalyzed repositioning

Aaron M. Morgan, Sarah E. LeGresley, Koan Briggs, Gada Al-Ani, and Christopher J. Fischer

Phys. Rev. E 97, 032422 (2018) - Published 30 March, 2018

Polymers

Electrostatic stiffening and induced persistence length for coassembled molecular bottlebrushes

Ingeborg M. Storm, Martien A. Cohen Stuart, Renko de Vries, and Frans A. M. Leermakers

Phys. Rev. E 97, 032501 (2018) - Published 2 March, 2018

Universal size properties of a star-ring polymer structure in disordered environments

K. Haydukivska and V. Blavatska

Phys. Rev. E 97, 032502 (2018) - Published 5 March, 2018

Polyelectrolyte brush bilayers in weak interpenetration regime: Scaling theory and molecular dynamics simulations

Parth Rakesh Desai, Shayandev Sinha, and Siddhartha Das

Phys. Rev. E 97, 032503 (2018) - Published 13 March, 2018

Star polymers as unit cells for coarse-graining cross-linked networks

Taras Y. Molotilin, Salim R. Maduar, and Olga I. Vinogradova

Phys. Rev. E 97, 032504 (2018) - Published 13 March, 2018

Engineering single-polymer micelle shape using nonuniform spontaneous surface curvature

Brian Moths and T. A. Witten

Phys. Rev. E 97, 032505 (2018) - Published 14 March, 2018

Filamentary structures that self-organize due to adhesion

A. Sengab and R. C. Picu

Phys. Rev. E 97, 032506 (2018) - Published 23 March, 2018

Tuning relaxation dynamics and mechanical properties of polymer films of identical thickness

Marwa Kchaou, Pierre Alcouffe, Sivasurender Chandran, Philippe Cassagnau, Günter Reiter, and Samer Al Akhrass

Phys. Rev. E 97, 032507 (2018) - Published 23 March, 2018

Depletion interaction between colloids mediated by an athermal polymer blend

A. I. Chervanyov

Phys. Rev. E 97, 032508 (2018) - Published 29 March, 2018

Colloids, Complex Fluids, and Active Matter

Paramagnetic colloids: Chaotic routes to clusters and molecules

Hamed Abdi, Rasam Soheilian, Randall M. Erb, and Craig E. Maloney

Phys. Rev. E 97, 032601 (2018) - Published 2 March, 2018

Soft inclusion in a confined fluctuating active gel

Amit Singh Vishen, J.-F. Rupprecht, G. V. Shivashankar, J. Prost, and Madan Rao

Phys. Rev. E 97, 032602 (2018) - Published 2 March, 2018

Self-driven particles in linear flows and trapped in a harmonic potential

Mario Sandoval, Julio C. Hidalgo-Gonzalez, and Jose I. Jimenez-Aquino

Phys. Rev. E 97, 032603 (2018) - Published 14 March, 2018

Active processes in one dimension

Thibaut Demaerel and Christian Maes

Phys. Rev. E 97, 032604 (2018) - Published 14 March, 2018

Depletion zones and crystallography on pinched spheres

Jingyuan Chen, Xiangjun Xing, and Zhenwei Yao

Phys. Rev. E 97, 032605 (2018) - Published 20 March, 2018

Active Brownian particles near straight or curved walls: Pressure and boundary layers

Ayhan Duzgun and Jonathan V. Selinger

Phys. Rev. E 97, 032606 (2018) - Published 21 March, 2018

Fluctuating nonlinear hydrodynamics of flocking

Sunil Kumar Yadav and Shankar P. Das

Phys. Rev. E 97, 032607 (2018) - Published 23 March, 2018

Temperature effects on drift of suspended single-domain particles induced by the Magnus force

S. I. Denisov, T. V. Lyutyy, V. V. Reva, and A. S. Yermolenko

Phys. Rev. E 97, 032608 (2018) - Published 27 March, 2018

Yielding of a model glass former: An interpretation with an effective system of icosahedra

Rhiannon Pinney, Tanniemola B. Liverpool, and C. Patrick Royall

Phys. Rev. E 97, 032609 (2018) - Published 28 March, 2018

Magnetic susceptibility, nanorheology, and magnetoviscosity of magnetic nanoparticles in viscoelastic environments

Patrick Ilg and Apostolos E. A. S. Evangelopoulos

Phys. Rev. E 97, 032610 (2018) - Published 30 March, 2018

Reynolds-number-dependent dynamical transitions on hydrodynamic synchronization modes of externally driven colloids

Norihiro Oyama, Kosuke Teshigawara, John Jairo Molina, Ryoichi Yamamoto, and Takashi Taniguchi

Phys. Rev. E 97, 032611 (2018) - Published 30 March, 2018

Liquid Crystals

Modeling deformation and chaining of flexible shells in a nematic solvent with finite elements on an adaptive moving mesh

Andrew DeBenedictis, Timothy J. Atherton, Andrea L. Rodarte, and Linda S. Hirst

Phys. Rev. E 97, 032701 (2018) - Published 2 March, 2018

$N − Sm A − Sm C$ phase transitions probed by a pair of elastically bound colloids

Muhammed Rasi M, K. P. Zuhail, Arun Roy, and Surajit Dhara

Phys. Rev. E 97, 032702 (2018) - Published 13 March, 2018

Tunable hybrid optical modes in a bounded cholesteric liquid crystal with a twist defect

Maxim V. Pyatnov, Stepan Ya. Vetrov, and Ivan V. Timofeev

Phys. Rev. E 97, 032703 (2018) - Published 13 March, 2018

Director gliding in a nematic liquid crystal layer: Quantitative comparison with experiments

E. Mema, L. Kondic, and L. J. Cummings

Phys. Rev. E 97, 032704 (2018) - Published 19 March, 2018

Electroclinic effect in the chiral lamellar $α$ phase of a lyotropic liquid crystal

Marc D. Harjung and Frank Giesselmann

Phys. Rev. E 97, 032705 (2018) - Published 30 March, 2018

Films and Interfaces

Radial restricted solid-on-solid and etching interface-growth models

Sidiney G. Alves

Phys. Rev. E 97, 032801 (2018) - Published 20 March, 2018

Granular Materials

Force-chain evolution in a two-dimensional granular packing compacted by vertical tappings

Naoki Iikawa, M. M. Bandi, and Hiroaki Katsuragi

Phys. Rev. E 97, 032901 (2018) - Published 26 March, 2018

Dimension dependence of clustering dynamics in models of ballistic aggregation and freely cooling granular gas

Subhajit Paul and Subir K. Das

Phys. Rev. E 97, 032902 (2018) - Published 26 March, 2018

Solid Mechanics

Local yield stress statistics in model amorphous solids

Armand Barbot, Matthias Lerbinger, Anier Hernandez-Garcia, Reinaldo García-García, Michael L. Falk, Damien Vandembroucq, and Sylvain Patinet

Phys. Rev. E 97, 033001 (2018) - Published 5 March, 2018

Universal avalanche statistics and triggering close to failure in a mean-field model of rheological fracture

Jordi Baró and Jörn Davidsen

Phys. Rev. E 97, 033002 (2018) - Published 29 March, 2018

Enhancement of the water flow velocity through carbon nanotubes resulting from the radius dependence of the friction due to electron excitations

J. B. Sokoloff

Phys. Rev. E 97, 033107 (2018) - Published 19 March, 2018

EDITORS' SUGGESTION

Barriers to front propagation in laminar, three-dimensional fluid flows

Minh Doan, J. J. Simons, Katherine Lilienthal, Tom Solomon, and Kevin A. Mitchell

Phys. Rev. E 97, 033111 (2018) - Published 26 March, 2018

Electrohydrodynamic coalescence of droplets using an embedded potential flow model

M. Garzon, L. J. Gray, and J. A. Sethian

Phys. Rev. E 97, 033112 (2018) - Published 30 March, 2018

Applicability of Kerker preconditioning scheme to the self-consistent density functional theory calculations of inhomogeneous systems

Yuzhi Zhou, Han Wang, Yu Liu, Xingyu Gao, and Haifeng Song

Phys. Rev. E 97, 033305 (2018) - Published 9 March, 2018

Realizations of highly heterogeneous collagen networks via stochastic reconstruction for micromechanical analysis of tumor cell invasion

Hanqing Nan, Long Liang, Guo Chen, Liyu Liu, Ruchuan Liu, and Yang Jiao

Phys. Rev. E 97, 033311 (2018) - Published 21 March, 2018

Numerical simulation of three-component multiphase flows at high density and viscosity ratios using lattice Boltzmann methods

Reza Haghani Hassan Abadi, Abbas Fakhari, and Mohammad Hassan Rahimian

Phys. Rev. E 97, 033312 (2018) - Published 22 March, 2018

Local lubrication model for spherical particles within incompressible Navier-Stokes flows

B. Lambert, L. Weynans, and M. Bergmann

Phys. Rev. E 97, 033313 (2018) - Published 28 March, 2018

Towards information-optimal simulation of partial differential equations

Reimar H. Leike and Torsten A. Enßlin

Phys. Rev. E 97, 033314 (2018) - Published 30 March, 2018

ERRATA

Publisher's Note: Negative pressure in shear thickening band of a dilatant fluid [Phys. Rev. E 94, 062614 (2016)]

Shin-ichiro Nagahiro and Hiizu Nakanishi

Phys. Rev. E 97, 039901 (2018) - Published 12 March, 2018