Volume 97, Issue 4

April 2018

Browse Issues:

HIGHLIGHTED ARTICLES

EDITORS' SUGGESTION

RAPID COMMUNICATION

Glass transition of soft colloids

Adrian-Marie Philippe, Domenico Truzzolillo, Julian Galvan-Myoshi, Philippe Dieudonné-George, Véronique Trappe, Ludovic Berthier, and Luca Cipelletti

Phys. Rev. E 97, 040601(R) (2018) - Published 11 April, 2018

The authors study the glass transition of soft colloids with computer simulations and experimental measurements. In contrast to previous work, they find that the behavior of the relaxation time is independent of particle softness, interaction type, and particle deformability, for a large range of parameters.

EDITORS' SUGGESTION

Landau theory of the short-time dynamical phase transitions of the Kardar-Parisi-Zhang interface

Naftali R. Smith, Alex Kamenev, and Baruch Meerson

Phys. Rev. E 97, 042130 (2018) - Published 25 April, 2018

The Kardar-Parisi-Zhang equation describes an important class of stochastic growth processes. The authors use the optimal fluctuation method to study extremal statistics of the interface height in this equation. The resulting detailed characterization of the system’s behavior makes contact with available exact results.

EDITORS' SUGGESTION

Neural network approach to time-dependent dividing surfaces in classical reaction dynamics

Philippe Schraft, Andrej Junginger, Matthias Feldmaier, Robin Bardakcioglu, Jörg Main, Günter Wunner, and Rigoberto Hernandez

Phys. Rev. E 97, 042309 (2018) - Published 19 April, 2018

The authors of this paper use a neural network to construct a time-dependent dividing surface between reactant and product states in chemical reactions. The neural network is trained on a set of calculated points so that its output provides the position of the dividing surface. The approach is demonstrated for two simple models and has the potential to simplify the calculation of reaction rates in more complicated reactions.

EDITORS' SUGGESTION

Quantifying fluctuations in reversible enzymatic cycles and clocks

Harmen Wierenga, Pieter Rein ten Wolde, and Nils B. Becker

Phys. Rev. E 97, 042404 (2018) - Published 4 April, 2018

Fluctuations are a fundamental feature of biochemical reactions, and this paper presents a unified framework to describe such fluctuations in biochemical reaction cycles. The authors show first that the standard alternatives to quantify randomness in these processes are essentially equivalent and then proceed to characterize the statistical properties of the cycle period.

EDITORS' SUGGESTION

Catch bonding in the forced dissociation of a polymer endpoint

Cyril Vrusch and Cornelis Storm

Phys. Rev. E 97, 042405 (2018) - Published 4 April, 2018

Catch bonding is a phenomenon where the mean lifetime of a bond increases when subjected to a pulling force, as has been observed experimentally in protein binding. The authors successfully reproduce this feature using a simplified model in which a particle confined in a symmetric potential is pulled with a nonlinear force; this resembles more closely real polymer and protein interactions.

EDITORS' SUGGESTION

Detachment dynamics of colloidal spheres with adhesive interactions

J. Bergenholtz

Phys. Rev. E 97, 042610 (2018) - Published 23 April, 2018

Detachment processes play an important role in the dynamics of colloids. This work demonstrates that including repeated attachment and detachment events gives predictions for a colloidal particle’s escape probability that are significantly different from those in first-passage-time descriptions. The author finds an analytical solution for detachment dynamics that should prove useful for a variety of applications.

EDITORS' SUGGESTION

Effect of shock waves on the statistics and scaling in compressible isotropic turbulence

Jianchun Wang, Minping Wan, Song Chen, Chenyue Xie, and Shiyi Chen

Phys. Rev. E 97, 043108 (2018) - Published 11 April, 2018

This paper examines the spectra of the velocity and several thermodynamic variables in compressible turbulence in the presence of large-scale shock waves. The authors perform simulations of turbulence driven by solenoidal and compressible forces for a range of Mach numbers, and are able to extract different scaling behaviors. In addition, they propose heuristic ways to account for the observations.

EDITORS' SUGGESTION

From sticky-hard-sphere to Lennard-Jones-type clusters

Lukas Trombach, Robert S. Hoy, David J. Wales, and Peter Schwerdtfeger

Phys. Rev. E 97, 043309 (2018) - Published 24 April, 2018

This paper examines the connection between the morphology of sticky-hard-sphere clusters and the energy landscape of soft potentials. The authors address this question for variants of the well-known Lennard-Jones model up to clusters of 13 particles, and study how the results depend on the softness, as characterized by the exponents in the potential.

RAPID COMMUNICATIONS

Statistical Physics

RAPID COMMUNICATION

Persistence of non-Markovian Gaussian stationary processes in discrete time

Markus Nyberg and Ludvig Lizana

Phys. Rev. E 97, 040101(R) (2018) - Published 12 April, 2018

RAPID COMMUNICATION

Universality from disorder in the random-bond Blume-Capel model

N. G. Fytas, J. Zierenberg, P. E. Theodorakis, M. Weigel, W. Janke, and A. Malakis

Phys. Rev. E 97, 040102(R) (2018) - Published 13 April, 2018

RAPID COMMUNICATION

When fast and slow interfaces grow together: Connection to the half-space problem of the Kardar-Parisi-Zhang class

Yasufumi Ito and Kazumasa A. Takeuchi

Phys. Rev. E 97, 040103(R) (2018) - Published 13 April, 2018

RAPID COMMUNICATION

Duality and the universality class of the three-state Potts antiferromagnet on plane quadrangulations

Jian-Ping Lv, Youjin Deng, Jesper Lykke Jacobsen, Jesús Salas, and Alan D. Sokal

Phys. Rev. E 97, 040104(R) (2018) - Published 25 April, 2018

Networks and Complex Systems

RAPID COMMUNICATION

Spontaneous repulsion in the $A + B \to 0$ reaction on coupled networks

Filippos Lazaridis, Bnaya Gross, Michael Maragakis, Panos Argyrakis, Ivan Bonamassa, Shlomo Havlin, and Reuven Cohen

Phys. Rev. E 97, 040301(R) (2018) - Published 4 April, 2018

Biological Physics

RAPID COMMUNICATION

Hidden long evolutionary memory in a model biochemical network

Md. Zulfikar Ali, Ned S. Wingreen, and Ranjan Mukhopadhyay

Phys. Rev. E 97, 040401(R) (2018) - Published 20 April, 2018

Colloids, Complex Fluids, and Active Matter

EDITORS' SUGGESTION

RAPID COMMUNICATION

Glass transition of soft colloids

Adrian-Marie Philippe, Domenico Truzzolillo, Julian Galvan-Myoshi, Philippe Dieudonné-George, Véronique Trappe, Ludovic Berthier, and Luca Cipelletti

Phys. Rev. E 97, 040601(R) (2018) - Published 11 April, 2018

Liquid Crystals

RAPID COMMUNICATION

Defect transitions in nematic liquid-crystal capillary bridges

Perry W. Ellis, Shengnan Huang, Susannah Klaneček, Jayalakshmi Vallamkondu, Edward Dannemiller, Mark Vernon, Ya-wen Chang, Paul M. Goldbart, and Alberto Fernandez-Nieves

Phys. Rev. E 97, 040701(R) (2018) - Published 13 April, 2018

RAPID COMMUNICATION

Harmonic field in knotted space

Xiuqing Duan and Zhenwei Yao

Phys. Rev. E 97, 040702(R) (2018) - Published 25 April, 2018

Films and Interfaces

RAPID COMMUNICATION

Interface collisions

F. D. A. Aarão Reis and O. Pierre-Louis

Phys. Rev. E 97, 040801(R) (2018) - Published 9 April, 2018

Granular Materials

RAPID COMMUNICATION

Ergodicity breaking dynamics of arch collapse

Carl Merrigan, Sumit Kumar Birwa, Shubha Tewari, and Bulbul Chakraborty

Phys. Rev. E 97, 040901(R) (2018) - Published 24 April, 2018

ARTICLES

Statistical Physics

Fluctuation relation for heat exchange in Markovian open quantum systems

M. Ramezani, M. Golshani, and A. T. Rezakhani

Phys. Rev. E 97, 042101 (2018) - Published 2 April, 2018

Establishing the kinetics of ballistic-to-diffusive transition using directional statistics

Pai Liu, William R. Heinson, Benjamin J. Sumlin, Kuan-Yu Shen, and Rajan K. Chakrabarty

Phys. Rev. E 97, 042102 (2018) - Published 4 April, 2018

Role of sufficient statistics in stochastic thermodynamics and its implication to sensory adaptation

Takumi Matsumoto and Takahiro Sagawa

Phys. Rev. E 97, 042103 (2018) - Published 5 April, 2018

Quantum gas in the fast forward scheme of adiabatically expanding cavities: Force and equation of state

Gulmira Babajanova, Jasur Matrasulov, and Katsuhiro Nakamura

Phys. Rev. E 97, 042104 (2018) - Published 5 April, 2018

1/ $f$ noise in the intensity fluctuations of vertical-cavity surface-emitting lasers subject to parallel optical injection

Miguel A. Rodríguez, Florian Denis-le Coarer, and Ángel Valle

Phys. Rev. E 97, 042105 (2018) - Published 6 April, 2018

Escape time, relaxation, and sticky states of a softened Henon-Heiles model: Low-frequency vibrational mode effects and glass relaxation

J. Quetzalcóatl Toledo-Marín and Gerardo G. Naumis

Phys. Rev. E 97, 042106 (2018) - Published 6 April, 2018

Relations between heat exchange and Rényi divergences

Bo-Bo Wei

Phys. Rev. E 97, 042107 (2018) - Published 6 April, 2018

Entanglement entropy of a three-spin-interacting spin chain with a time-reversal-breaking impurity at one boundary

Tanay Nag and Atanu Rajak

Phys. Rev. E 97, 042108 (2018) - Published 9 April, 2018

Work probability distribution for a ferromagnet with long-ranged and short-ranged correlations

J. K. Bhattacharjee, T. R. Kirkpatrick, and J. V. Sengers

Phys. Rev. E 97, 042109 (2018) - Published 9 April, 2018

Decrease of Fisher information and the information geometry of evolution equations for quantum mechanical probability amplitudes

Carlo Cafaro and Paul M. Alsing

Phys. Rev. E 97, 042110 (2018) - Published 9 April, 2018

Operator product expansion in Liouville field theory and Seiberg-type transitions in log-correlated random energy models

Xiangyu Cao, Pierre Le Doussal, Alberto Rosso, and Raoul Santachiara

Phys. Rev. E 97, 042111 (2018) - Published 9 April, 2018

Unified picture of strong-coupling stochastic thermodynamics and time reversals

Erik Aurell

Phys. Rev. E 97, 042112 (2018) - Published 9 April, 2018

Standard and inverse bond percolation of straight rigid rods on square lattices

L. S. Ramirez, P. M. Centres, and A. J. Ramirez-Pastor

Phys. Rev. E 97, 042113 (2018) - Published 10 April, 2018

Integral transforms of the quantum mechanical path integral: Hit function and path-averaged potential

James P. Edwards, Urs Gerber, Christian Schubert, Maria Anabel Trejo, and Axel Weber

Phys. Rev. E 97, 042114 (2018) - Published 10 April, 2018

Characteristic time scales for diffusion processes through layers and across interfaces

Elliot J. Carr

Phys. Rev. E 97, 042115 (2018) - Published 11 April, 2018

Response to a small external force and fluctuations of a passive particle in a one-dimensional diffusive environment

François Huveneers

Phys. Rev. E 97, 042116 (2018) - Published 11 April, 2018

Effect of self-deflection on a totally asymmetric simple exclusion process with functions of site assignments

Satori Tsuzuki, Daichi Yanagisawa, and Katsuhiro Nishinari

Phys. Rev. E 97, 042117 (2018) - Published 12 April, 2018

Logarithmic speed-up of relaxation in $A − B$ annihilation with exclusion

Rahul Dandekar

Phys. Rev. E 97, 042118 (2018) - Published 12 April, 2018

Evaluation of the path integral for flow through random porous media

Marise J. E. Westbroek, Gil-Arnaud Coche, Peter R. King, and Dimitri D. Vvedensky

Phys. Rev. E 97, 042119 (2018) - Published 12 April, 2018

Efficiency at maximum power of a laser quantum heat engine enhanced by noise-induced coherence

Konstantin E. Dorfman, Dazhi Xu, and Jianshu Cao

Phys. Rev. E 97, 042120 (2018) - Published 13 April, 2018

Testing ground for fluctuation theorems: The one-dimensional Ising model

C. G. O. Lemos, M. Santos, A. L. Ferreira, and W. Figueiredo

Phys. Rev. E 97, 042121 (2018) - Published 13 April, 2018

Non-Gaussian diffusion in static disordered media

Liang Luo and Ming Yi

Phys. Rev. E 97, 042122 (2018) - Published 16 April, 2018

Bak-Sneppen model: Local equilibrium and critical value

Daniel Fraiman

Phys. Rev. E 97, 042123 (2018) - Published 16 April, 2018

Artificial light harvesting by dimerized Möbius ring

Lei Xu (徐磊), Z. R. Gong (龚志瑞), Ming-Jie Tao (陶明杰), and Qing Ai (艾清)

Phys. Rev. E 97, 042124 (2018) - Published 17 April, 2018

Brownian dynamics of self-regulated particles with additional degrees of freedom: Symmetry breaking and homochirality

Debankur Bhattacharyya, Shibashis Paul, Shyamolina Ghosh, and Deb Shankar Ray

Phys. Rev. E 97, 042125 (2018) - Published 18 April, 2018

Lifted worm algorithm for the Ising model

Eren Metin Elçi, Jens Grimm, Lijie Ding, Abrahim Nasrawi, Timothy M. Garoni, and Youjin Deng

Phys. Rev. E 97, 042126 (2018) - Published 18 April, 2018

Phase-space interference in extensive and nonextensive quantum heat engines

Ali Ü. C. Hardal, Mauro Paternostro, and Özgür E. Müstecaplıoğlu

Phys. Rev. E 97, 042127 (2018) - Published 18 April, 2018

Self-avoiding walk on a square lattice with correlated vacancies

J. Cheraghalizadeh, M. N. Najafi, H. Mohammadzadeh, and A. Saber

Phys. Rev. E 97, 042128 (2018) - Published 18 April, 2018

Statistics of zero crossings in rough interfaces with fractional elasticity

Arturo L. Zamorategui, Vivien Lecomte, and Alejandro B. Kolton

Phys. Rev. E 97, 042129 (2018) - Published 24 April, 2018

EDITORS' SUGGESTION

Landau theory of the short-time dynamical phase transitions of the Kardar-Parisi-Zhang interface

Naftali R. Smith, Alex Kamenev, and Baruch Meerson

Phys. Rev. E 97, 042130 (2018) - Published 25 April, 2018

Density profiles of a self-gravitating lattice gas in one, two, and three dimensions

Benaoumeur Bakhti, Divana Boukari, Michael Karbach, Philipp Maass, and Gerhard Müller

Phys. Rev. E 97, 042131 (2018) - Published 26 April, 2018

Husimi-cactus approximation study on the diluted spin ice

Hiromi Otsuka, Yutaka Okabe, and Konstantin Nefedev

Phys. Rev. E 97, 042132 (2018) - Published 27 April, 2018

Time-fractional characterization of brine reaction and precipitation in porous media

Jianping Xu and Guancheng Jiang

Phys. Rev. E 97, 042133 (2018) - Published 30 April, 2018

Nonlinear Dynamics and Chaos

Origin of chaos near three-dimensional quantum vortices: A general Bohmian theory

Athanasios C. Tzemos, Christos Efthymiopoulos, and George Contopoulos

Phys. Rev. E 97, 042201 (2018) - Published 2 April, 2018

Consistency properties of chaotic systems driven by time-delayed feedback

T. Jüngling, M. C. Soriano, N. Oliver, X. Porte, and I. Fischer

Phys. Rev. E 97, 042202 (2018) - Published 5 April, 2018

Coupled harmonic oscillators and their quantum entanglement

Dmitry N. Makarov

Phys. Rev. E 97, 042203 (2018) - Published 5 April, 2018

Bifurcation structure of localized states in the Lugiato-Lefever equation with anomalous dispersion

P. Parra-Rivas, D. Gomila, L. Gelens, and E. Knobloch

Phys. Rev. E 97, 042204 (2018) - Published 6 April, 2018

Combined effects of nonparaxiality, optical activity, and walk-off on rogue wave propagation in optical fibers filled with chiral materials

D. D. Estelle Temgoua, M. B. Tchoula Tchokonte, and T. C. Kofane

Phys. Rev. E 97, 042205 (2018) - Published 9 April, 2018

Quasibound states in a triple Gaussian potential

L. E. Reichl and Max D. Porter

Phys. Rev. E 97, 042206 (2018) - Published 9 April, 2018

Comparison of six methods for the detection of causality in a bivariate time series

Anna Krakovská, Jozef Jakubík, Martina Chvosteková, David Coufal, Nikola Jajcay, and Milan Paluš

Phys. Rev. E 97, 042207 (2018) - Published 10 April, 2018

Simple waves in a two-component Bose-Einstein condensate

S. K. Ivanov and A. M. Kamchatnov

Phys. Rev. E 97, 042208 (2018) - Published 16 April, 2018

Stabilization of dynamics of oscillatory systems by nonautonomous perturbation

Maxime Lucas, Julian Newman, and Aneta Stefanovska

Phys. Rev. E 97, 042209 (2018) - Published 17 April, 2018

System identification of propagating wave segments in excitable media and its application to advanced control

Hisatoshi Katsumata, Keiji Konishi, and Naoyuki Hara

Phys. Rev. E 97, 042210 (2018) - Published 17 April, 2018

Role of short periodic orbits in quantum maps with continuous openings

Carlos A. Prado, Gabriel G. Carlo, R. M. Benito, and F. Borondo

Phys. Rev. E 97, 042211 (2018) - Published 18 April, 2018

Breathing multichimera states in nonlocally coupled phase oscillators

Yusuke Suda and Koji Okuda

Phys. Rev. E 97, 042212 (2018) - Published 19 April, 2018

Front propagation and clustering in the stochastic nonlocal Fisher equation

Yehuda A. Ganan and David A. Kessler

Phys. Rev. E 97, 042213 (2018) - Published 19 April, 2018

Uncertainty dimension and basin entropy in relativistic chaotic scattering

Juan D. Bernal, Jesús M. Seoane, and Miguel A. F. Sanjuán

Phys. Rev. E 97, 042214 (2018) - Published 20 April, 2018

Emergent structures in reaction-advection-diffusion systems on a sphere

Andrew L. Krause, Abigail M. Burton, Nabil T. Fadai, and Robert A. Van Gorder

Phys. Rev. E 97, 042215 (2018) - Published 23 April, 2018

Open quantum maps from complex scaling of kicked scattering systems

Normann Mertig and Akira Shudo

Phys. Rev. E 97, 042216 (2018) - Published 25 April, 2018

Symmetry- and input-cluster synchronization in networks

Abu Bakar Siddique, Louis Pecora, Joseph D. Hart, and Francesco Sorrentino

Phys. Rev. E 97, 042217 (2018) - Published 25 April, 2018

Transition from homogeneous to inhomogeneous limit cycles: Effect of local filtering in coupled oscillators

Tanmoy Banerjee, Debabrata Biswas, Debarati Ghosh, Biswabibek Bandyopadhyay, and Jürgen Kurths

Phys. Rev. E 97, 042218 (2018) - Published 25 April, 2018

Avalanches and scaling collapse in the large- $N$ Kuramoto model

J. Patrick Coleman, Karin A. Dahmen, and Richard L. Weaver

Phys. Rev. E 97, 042219 (2018) - Published 27 April, 2018

Chaos and Anderson-like localization in polydisperse granular chains

V. Achilleos, G. Theocharis, and Ch. Skokos

Phys. Rev. E 97, 042220 (2018) - Published 27 April, 2018

Stability and self-organization of planetary systems

Renato Pakter and Yan Levin

Phys. Rev. E 97, 042221 (2018) - Published 30 April, 2018

Networks and Complex Systems

Emergent explosive synchronization in adaptive complex networks

Vanesa Avalos-Gaytán, Juan A. Almendral, I. Leyva, F. Battiston, V. Nicosia, V. Latora, and S. Boccaletti

Phys. Rev. E 97, 042301 (2018) - Published 4 April, 2018

Topological resilience in non-normal networked systems

Malbor Asllani and Timoteo Carletti

Phys. Rev. E 97, 042302 (2018) - Published 4 April, 2018

Physics of automated driving in framework of three-phase traffic theory

Boris S. Kerner

Phys. Rev. E 97, 042303 (2018) - Published 5 April, 2018

Symmetries and synchronization in multilayer random networks

Alberto Saa

Phys. Rev. E 97, 042304 (2018) - Published 5 April, 2018

Heterogeneous update mechanisms in evolutionary games: Mixing innovative and imitative dynamics

Marco Antonio Amaral and Marco Alberto Javarone

Phys. Rev. E 97, 042305 (2018) - Published 5 April, 2018

Bursting endemic bubbles in an adaptive network

N. Sherborne, K. B. Blyuss, and I. Z. Kiss

Phys. Rev. E 97, 042306 (2018) - Published 9 April, 2018

Multiple scales in metapopulations of public goods producers

Marianne Bauer and Erwin Frey

Phys. Rev. E 97, 042307 (2018) - Published 10 April, 2018

General method to find the attractors of discrete dynamic models of biological systems

Xiao Gan and Réka Albert

Phys. Rev. E 97, 042308 (2018) - Published 17 April, 2018

EDITORS' SUGGESTION

Neural network approach to time-dependent dividing surfaces in classical reaction dynamics

Philippe Schraft, Andrej Junginger, Matthias Feldmaier, Robin Bardakcioglu, Jörg Main, Günter Wunner, and Rigoberto Hernandez

Phys. Rev. E 97, 042309 (2018) - Published 19 April, 2018

Interactions of information transfer along separable causal paths

Peishi Jiang and Praveen Kumar

Phys. Rev. E 97, 042310 (2018) - Published 20 April, 2018

Structural stability of interaction networks against negative external fields

S. Yoon, A. V. Goltsev, and J. F. F. Mendes

Phys. Rev. E 97, 042311 (2018) - Published 20 April, 2018

Framework for cascade size calculations on random networks

Rebekka Burkholz and Frank Schweitzer

Phys. Rev. E 97, 042312 (2018) - Published 20 April, 2018

Resilience of networks to environmental stress: From regular to random networks

Young-Ho Eom

Phys. Rev. E 97, 042313 (2018) - Published 20 April, 2018

Localization of multilayer networks by optimized single-layer rewiring

Sarika Jalan and Priodyuti Pradhan

Phys. Rev. E 97, 042314 (2018) - Published 23 April, 2018

Stable target opinion through power-law bias in information exchange

Amitava Datta

Phys. Rev. E 97, 042315 (2018) - Published 24 April, 2018

Generative models for local network community detection

Twan van Laarhoven

Phys. Rev. E 97, 042316 (2018) - Published 25 April, 2018

Two order parameters for the Kuramoto model on complex networks

Soon-Hyung Yook and Yup Kim

Phys. Rev. E 97, 042317 (2018) - Published 25 April, 2018

Revealing the microstructure of the giant component in random graph ensembles

Ido Tishby, Ofer Biham, Eytan Katzav, and Reimer Kühn

Phys. Rev. E 97, 042318 (2018) - Published 25 April, 2018

Entropy of spatial network ensembles

Justin P. Coon, Carl P. Dettmann, and Orestis Georgiou

Phys. Rev. E 97, 042319 (2018) - Published 25 April, 2018

Analysis of timescale to consensus in voting dynamics with more than two options

Degang Wu and Kwok Yip Szeto

Phys. Rev. E 97, 042320 (2018) - Published 27 April, 2018

Balancing selfishness and norm conformity can explain human behavior in large-scale prisoner's dilemma games and can poise human groups near criticality

John Realpe-Gómez, Giulia Andrighetto, Luis Gustavo Nardin, and Javier Antonio Montoya

Phys. Rev. E 97, 042321 (2018) - Published 30 April, 2018

Extreme learning machine for reduced order modeling of turbulent geophysical flows

Omer San and Romit Maulik

Phys. Rev. E 97, 042322 (2018) - Published 30 April, 2018

Biological Physics

Diffusion-advection within dynamic biological gaps driven by structural motion

Robert J. Asaro, Qiang Zhu, and Kuanpo Lin

Phys. Rev. E 97, 042401 (2018) - Published 2 April, 2018

Multimodal transport and dispersion of organelles in narrow tubular cells

Saurabh S. Mogre and Elena F. Koslover

Phys. Rev. E 97, 042402 (2018) - Published 3 April, 2018

Invasion waves in the biochemical warfare between living organisms

S. A. Carvalho and M. L. Martins

Phys. Rev. E 97, 042403 (2018) - Published 3 April, 2018

EDITORS' SUGGESTION

Quantifying fluctuations in reversible enzymatic cycles and clocks

Harmen Wierenga, Pieter Rein ten Wolde, and Nils B. Becker

Phys. Rev. E 97, 042404 (2018) - Published 4 April, 2018

EDITORS' SUGGESTION

Catch bonding in the forced dissociation of a polymer endpoint

Cyril Vrusch and Cornelis Storm

Phys. Rev. E 97, 042405 (2018) - Published 4 April, 2018

Theory of time-averaged neutral dynamics with environmental stochasticity

Matan Danino and Nadav M. Shnerb

Phys. Rev. E 97, 042406 (2018) - Published 5 April, 2018

Long ligands reinforce biological adhesion under shear flow

Aleksey V. Belyaev

Phys. Rev. E 97, 042407 (2018) - Published 10 April, 2018

Interplay of activation kinetics and the derivative conductance determines resonance properties of neurons

Rodrigo F. O. Pena, Cesar C. Ceballos, Vinicius Lima, and Antonio C. Roque

Phys. Rev. E 97, 042408 (2018) - Published 10 April, 2018

Role of atomic spin-mechanical coupling in the problem of a magnetic biocompass

Yunshan Cao and Peng Yan

Phys. Rev. E 97, 042409 (2018) - Published 10 April, 2018

Formation of dominant mode by evolution in biological systems

Chikara Furusawa and Kunihiko Kaneko

Phys. Rev. E 97, 042410 (2018) - Published 12 April, 2018

Amphibian sacculus and the forced Kuramoto model with intrinsic noise and frequency dispersion

Seung Ji, Dolores Bozovic, and Robijn Bruinsma

Phys. Rev. E 97, 042411 (2018) - Published 13 April, 2018

Modulation of dynamic modes by interplay between positive and negative feedback loops in gene regulatory networks

Liu-Suo Wang, Ning-Xi Li, Jing-Jia Chen, Xiao-Peng Zhang, Feng Liu, and Wei Wang

Phys. Rev. E 97, 042412 (2018) - Published 16 April, 2018

Emergence of collective propulsion through cell-cell adhesion

Katsuyoshi Matsushita

Phys. Rev. E 97, 042413 (2018) - Published 18 April, 2018

Memory-induced nonlinear dynamics of excitation in cardiac diseases

Julian Landaw and Zhilin Qu

Phys. Rev. E 97, 042414 (2018) - Published 24 April, 2018

Measuring neuronal avalanches in disordered systems with absorbing states

M. Girardi-Schappo and M. H. R. Tragtenberg

Phys. Rev. E 97, 042415 (2018) - Published 24 April, 2018

Load response of shape-changing microswimmers scales with their swimming efficiency

Benjamin M. Friedrich

Phys. Rev. E 97, 042416 (2018) - Published 26 April, 2018

Gene regulatory and signaling networks exhibit distinct topological distributions of motifs

Gustavo Rodrigues Ferreira, Helder Imoto Nakaya, and Luciano da Fontoura Costa

Phys. Rev. E 97, 042417 (2018) - Published 27 April, 2018

Neural field theory of perceptual echo and implications for estimating brain connectivity

P. A. Robinson, J. C. Pagès, N. C. Gabay, T. Babaie, and K. N. Mukta

Phys. Rev. E 97, 042418 (2018) - Published 30 April, 2018

Polymers

Crystallization in melts of short, semiflexible hard polymer chains: An interplay of entropies and dimensions

T. Shakirov and W. Paul

Phys. Rev. E 97, 042501 (2018) - Published 5 April, 2018

Inhomogeneity of block copolymers at the interface of an immiscible polymer blend

Ji Ho Ryu, YongJoo Kim, and Won Bo Lee

Phys. Rev. E 97, 042502 (2018) - Published 18 April, 2018

Electrostatic bending response of a charged helix

A. V. Zampetaki, J. Stockhofe, and P. Schmelcher

Phys. Rev. E 97, 042503 (2018) - Published 20 April, 2018

Mechanical transduction via a single soft polymer

Ruizheng Hou, Nan Wang, Weizhu Bao, and Zhisong Wang

Phys. Rev. E 97, 042504 (2018) - Published 25 April, 2018

Colloids, Complex Fluids, and Active Matter

Foam rheology at large deformation

J.-C. Géminard, J. C. Pastenes, and F. Melo

Phys. Rev. E 97, 042601 (2018) - Published 4 April, 2018

Hydrodynamic interaction of trapped active Janus particles in two dimensions

Tanwi Debnath, Yunyun Li, Pulak K. Ghosh, and Fabio Marchesoni

Phys. Rev. E 97, 042602 (2018) - Published 9 April, 2018

Solvent coarsening around colloids driven by temperature gradients

Sutapa Roy, Siegfried Dietrich, and Anna Maciolek

Phys. Rev. E 97, 042603 (2018) - Published 11 April, 2018

Markovian robots: Minimal navigation strategies for active particles

Luis Gómez Nava, Robert Großmann, and Fernando Peruani

Phys. Rev. E 97, 042604 (2018) - Published 12 April, 2018

Dynamical patterns in nematic active matter on a sphere

Silke Henkes, M. Cristina Marchetti, and Rastko Sknepnek

Phys. Rev. E 97, 042605 (2018) - Published 16 April, 2018

Two-point active microrheology in a viscous medium exploiting a motional resonance excited in dual-trap optical tweezers

Shuvojit Paul, Randhir Kumar, and Ayan Banerjee

Phys. Rev. E 97, 042606 (2018) - Published 16 April, 2018

Mechanical instability and percolation of deformable particles through porous networks

Eduard Benet, Guillaume Lostec, John Pellegrino, and Franck Vernerey

Phys. Rev. E 97, 042607 (2018) - Published 19 April, 2018

Direct determination of forces between charged nanogels through coarse-grained simulations

Manuel Quesada-Pérez, José Alberto Maroto-Centeno, Alberto Martín-Molina, and Arturo Moncho-Jordá

Phys. Rev. E 97, 042608 (2018) - Published 19 April, 2018

Phase separation of self-propelled ballistic particles

Isaac R. Bruss and Sharon C. Glotzer

Phys. Rev. E 97, 042609 (2018) - Published 19 April, 2018

EDITORS' SUGGESTION

Detachment dynamics of colloidal spheres with adhesive interactions

J. Bergenholtz

Phys. Rev. E 97, 042610 (2018) - Published 23 April, 2018

Electrostatic interaction between dissimilar colloids at fluid interfaces

Arghya Majee, Timo Schmetzer, and Markus Bier

Phys. Rev. E 97, 042611 (2018) - Published 24 April, 2018

Pseudochemotaxis in inhomogeneous active Brownian systems

Hidde D. Vuijk, Abhinav Sharma, Debasish Mondal, Jens-Uwe Sommer, and Holger Merlitz

Phys. Rev. E 97, 042612 (2018) - Published 24 April, 2018

Liquid Crystals

Impact of spherical nanoparticles on nematic order parameters

C. Kyrou, S. Kralj, M. Panagopoulou, Y. Raptis, G. Nounesis, and I. Lelidis

Phys. Rev. E 97, 042701 (2018) - Published 6 April, 2018

Effects of monoclinic symmetry on the properties of biaxial liquid crystals

Nikita V. Solodkov, Mamatha Nagaraj, and J. Cliff Jones

Phys. Rev. E 97, 042702 (2018) - Published 10 April, 2018

Biaxial potential of surface-stabilized ferroelectric liquid crystals

Anatoly Kaznacheev, Evgeny Pozhidaev, Vladimir Rudyak, Alexander V. Emelyanenko, and Alexei Khokhlov

Phys. Rev. E 97, 042703 (2018) - Published 10 April, 2018

Calculation of gyrotropy coefficients in media with low-pitch helical structures

H. Dhaouadi, F. Trabelsi, O. Riahi, and T. Othman

Phys. Rev. E 97, 042704 (2018) - Published 25 April, 2018

Effects of flow on the dynamics of a ferromagnetic nematic liquid crystal

Tilen Potisk, Harald Pleiner, Daniel Svenšek, and Helmut R. Brand

Phys. Rev. E 97, 042705 (2018) - Published 26 April, 2018

Phase behavior and orientational ordering in block copolymers doped with anisotropic nanoparticles

M. A. Osipov, M. V. Gorkunov, A. V. Berezkin, and Y. V. Kudryavtsev

Phys. Rev. E 97, 042706 (2018) - Published 27 April, 2018

Electroconvection in one-dimensional liquid crystal cells

Jong-Hoon Huh

Phys. Rev. E 97, 042707 (2018) - Published 30 April, 2018

Films and Interfaces

Contact angle hysteresis on doubly periodic smooth rough surfaces in Wenzel's regime: The role of the contact line depinning mechanism

Stanimir Iliev, Nina Pesheva, and Pavel Iliev

Phys. Rev. E 97, 042801 (2018) - Published 13 April, 2018

Classical nucleation theory in the phase-field crystal model

Paul Jreidini, Gabriel Kocher, and Nikolas Provatas

Phys. Rev. E 97, 042802 (2018) - Published 30 April, 2018

Granular Materials

Experiments and characterization of low-frequency oscillations in a granular column

Loreto Oyarte Gálvez, Nicolás Rivas, and Devaraj van der Meer

Phys. Rev. E 97, 042901 (2018) - Published 11 April, 2018

Rheology of dilute cohesive granular gases

Satoshi Takada and Hisao Hayakawa

Phys. Rev. E 97, 042902 (2018) - Published 18 April, 2018

Characterizing granular networks using topological metrics

Joshua A. Dijksman, Lenka Kovalcinova, Jie Ren, Robert P. Behringer, Miroslav Kramar, Konstantin Mischaikow, and Lou Kondic

Phys. Rev. E 97, 042903 (2018) - Published 18 April, 2018

Slow relaxation dynamics of clogs in a vibrated granular silo

B. V. Guerrero, L. A. Pugnaloni, C. Lozano, I. Zuriguel, and A. Garcimartín

Phys. Rev. E 97, 042904 (2018) - Published 24 April, 2018

Solid Mechanics

Almost-dispersionless pulse transport in long quasiuniform spring-mass chains: A different kind of Newton's cradle

Ruggero Vaia

Phys. Rev. E 97, 043001 (2018) - Published 23 April, 2018

Thermodynamic dislocation theory: Bauschinger effect

K. C. Le and T. M. Tran

Phys. Rev. E 97, 043002 (2018) - Published 23 April, 2018

Fluid Dynamics

Generation of intermittent gravitocapillary waves via parametric forcing

Gustavo Castillo and Claudio Falcón

Phys. Rev. E 97, 043101 (2018) - Published 3 April, 2018

Reduced-order model for inertial locomotion of a slender swimmer

Raksha Mahalinkam, Felicity Gong, and Aditya S. Khair

Phys. Rev. E 97, 043102 (2018) - Published 3 April, 2018

Nonlinear oscillatory rarefied gas flow inside a rectangular cavity

Peng Wang, Lianhua Zhu, Wei Su, Lei Wu, and Yonghao Zhang

Phys. Rev. E 97, 043103 (2018) - Published 5 April, 2018

Transient response of nonideal ion-selective microchannel-nanochannel devices

Neta Leibowitz, Jarrod Schiffbauer, Sinwook Park, and Gilad Yossifon

Phys. Rev. E 97, 043104 (2018) - Published 5 April, 2018

Marangoni instability in a thin film heated from below: Effect of nonmonotonic dependence of surface tension on temperature

Rajkumar Sarma and Pranab Kumar Mondal

Phys. Rev. E 97, 043105 (2018) - Published 9 April, 2018

Linear Rayleigh-Taylor instability in an accelerated Newtonian fluid with finite width

S. A. Piriz, A. R. Piriz, and N. A. Tahir

Phys. Rev. E 97, 043106 (2018) - Published 9 April, 2018

Electrically modulated capillary filling imbibition of nematic liquid crystals

Jayabrata Dhar and Suman Chakraborty

Phys. Rev. E 97, 043107 (2018) - Published 9 April, 2018

EDITORS' SUGGESTION

Effect of shock waves on the statistics and scaling in compressible isotropic turbulence

Jianchun Wang, Minping Wan, Song Chen, Chenyue Xie, and Shiyi Chen

Phys. Rev. E 97, 043108 (2018) - Published 11 April, 2018

Onset of density-driven instabilities in fractured aquifers

Seyed Mostafa Jafari Raad and Hassan Hassanzadeh

Phys. Rev. E 97, 043109 (2018) - Published 12 April, 2018

Soap-film flow induced by electric fields in asymmetric frames

S. Mollaei, M. Nasiri, N. Soltanmohammadi, R. Shirsavar, A. Ramos, and A. Amjadi

Phys. Rev. E 97, 043110 (2018) - Published 17 April, 2018

Appearance of deterministic mixing behavior from ensembles of fluctuating hydrodynamics simulations of the Richtmyer-Meshkov instability

Kiran Narayanan and Ravi Samtaney

Phys. Rev. E 97, 043111 (2018) - Published 19 April, 2018

Dynamics of deformation and pinch-off of a migrating compound droplet in a tube

Manash Pratim Borthakur, Gautam Biswas, and Dipankar Bandyopadhyay

Phys. Rev. E 97, 043112 (2018) - Published 19 April, 2018

Discontinuous contact line motion of evaporating particle-laden droplet on superhydrophobic surfaces

Yutaka Yamada and Akihiko Horibe

Phys. Rev. E 97, 043113 (2018) - Published 20 April, 2018

Electrohydrodynamic channeling effects in narrow fractures and pores

Asger Bolet, Gaute Linga, and Joachim Mathiesen

Phys. Rev. E 97, 043114 (2018) - Published 23 April, 2018

One-dimensional reduction of viscous jets. I. Theory

Cyril Pitrou

Phys. Rev. E 97, 043115 (2018) - Published 24 April, 2018

One-dimensional reduction of viscous jets. II. Applications

Cyril Pitrou

Phys. Rev. E 97, 043116 (2018) - Published 24 April, 2018

Shock-wave structure based on the Navier-Stokes-Fourier equations

F. J. Uribe and R. M. Velasco

Phys. Rev. E 97, 043117 (2018) - Published 30 April, 2018

Plasma Physics

Magnetic field generation by pointwise zero-helicity three-dimensional steady flow of an incompressible electrically conducting fluid

Andrey Rasskazov, Roman Chertovskih, and Vladislav Zheligovsky

Phys. Rev. E 97, 043201 (2018) - Published 4 April, 2018

Accuracy of the microcanonical Lanczos method to compute real-frequency dynamical spectral functions of quantum models at finite temperatures

Satoshi Okamoto, Gonzalo Alvarez, Elbio Dagotto, and Takami Tohyama

Phys. Rev. E 97, 043308 (2018) - Published 20 April, 2018

EDITORS' SUGGESTION

ERRATA

Erratum: Polarization of active Janus particles [Phys. Rev. E 89, 050303(R) (2014)]

Thomas Bickel, Guillermo Zecua, and Alois Würger

Phys. Rev. E 97, 049901 (2018) - Published 24 April, 2018

Publisher's Note: Functional renormalization group approach to the Kraichnan model [Phys. Rev. E 92, 033016 (2015)]

Carlo Pagani

Phys. Rev. E 97, 049902 (2018) - Published 30 April, 2018

Publisher's Note: Empirical analysis of the lane formation process in bidirectional pedestrian flow [Phys. Rev. E 94, 032304 (2016)]

Claudio Feliciani and Katsuhiro Nishinari

Phys. Rev. E 97, 049903 (2018) - Published 30 April, 2018