Volume 80, Issue 4

October 2009

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HIGHLIGHTED ARTICLES

FEATURED IN PHYSICS

Experimental analysis of recoil effects induced by fluorescence photons

Alexander Zhdanov, Satish Rao, Andrey Fedyanin, and Dmitri Petrov

Phys. Rev. E 80, 046602 (2009) - Published 6 October, 2009

RAPID COMMUNICATIONS

Statistical physics

RAPID COMMUNICATION

Freezing into stripe states in two-dimensional ferromagnets and crossing probabilities in critical percolation

Kipton Barros, P. L. Krapivsky, and S. Redner

Phys. Rev. E 80, 040101(R) (2009) - Published 8 October, 2009

RAPID COMMUNICATION

Relaxation dynamics of an elastic string in random media

Jae Dong Noh (노재동) and Hyunggyu Park (박형규)

Phys. Rev. E 80, 040102(R) (2009) - Published 8 October, 2009

RAPID COMMUNICATION

Effective transport properties of random composites: Continuum calculations versus mapping to a network

Ying Chen and Christopher A. Schuh

Phys. Rev. E 80, 040103(R) (2009) - Published 16 October, 2009

RAPID COMMUNICATION

Finite-size scaling in stick percolation

Jiantong Li and Shi-Li Zhang

Phys. Rev. E 80, 040104(R) (2009) - Published 19 October, 2009

RAPID COMMUNICATION

Critical exponents and universality for the isotropic-nematic phase transition in a system of self-assembled rigid rods on a lattice

L. G. López, D. H. Linares, and A. J. Ramirez-Pastor

Phys. Rev. E 80, 040105(R) (2009) - Published 22 October, 2009

Equilibrium and linear transport properties of fluids

RAPID COMMUNICATION

Characteristic times in the nanometer-picosecond translational collective dynamics of molecular liquids

Ubaldo Bafile, Eleonora Guarini, Marco Sampoli, and Fabrizio Barocchi

Phys. Rev. E 80, 040201(R) (2009) - Published 12 October, 2009

Polymers

RAPID COMMUNICATION

Tension dynamics and viscoelasticity of extensible wormlike chains

Benedikt Obermayer and Erwin Frey

Phys. Rev. E 80, 040801(R) (2009) - Published 2 October, 2009

Biological physics

RAPID COMMUNICATION

Discontinuities at the DNA supercoiling transition

Bryan C. Daniels, Scott Forth, Maxim Y. Sheinin, Michelle D. Wang, and James P. Sethna

Phys. Rev. E 80, 040901(R) (2009) - Published 15 October, 2009

RAPID COMMUNICATION

Strong associations between microbe phenotypes and their network architecture

Soumen Roy and Vladimir Filkov

Phys. Rev. E 80, 040902(R) (2009) - Published 16 October, 2009

RAPID COMMUNICATION

Rebuilding cytoskeleton roads: Active-transport-induced polarization of cells

R. J. Hawkins, O. Bénichou, M. Piel, and R. Voituriez

Phys. Rev. E 80, 040903(R) (2009) - Published 19 October, 2009

ARTICLES

Statistical physics

Percolation thresholds on two-dimensional Voronoi networks and Delaunay triangulations

Adam M. Becker and Robert M. Ziff

Phys. Rev. E 80, 041101 (2009) - Published 1 October, 2009

Random walks on networks: Cumulative distribution of cover time

Nikola Zlatanov and Ljupco Kocarev

Phys. Rev. E 80, 041102 (2009) - Published 2 October, 2009

Nonlinear quantum heat transfer in hybrid structures: Sufficient conditions for thermal rectification

Lian-Ao Wu, Claire X. Yu, and Dvira Segal

Phys. Rev. E 80, 041103 (2009) - Published 2 October, 2009

Dense packings of polyhedra: Platonic and Archimedean solids

S. Torquato and Y. Jiao

Phys. Rev. E 80, 041104 (2009) - Published 5 October, 2009

Analytical results of the Nagel-Schreckenberg model with stochastic open boundary conditions

Ning Jia and Shoufeng Ma

Phys. Rev. E 80, 041105 (2009) - Published 5 October, 2009

Non-Markovian dynamics of a dissipative two-level system: Nonzero bias and sub-Ohmic bath

Congjun Gan and Hang Zheng

Phys. Rev. E 80, 041106 (2009) - Published 6 October, 2009

Negative specific heat in self-gravitating $N$ -body systems enclosed in a spherical container with reflecting walls

Nobuyoshi Komatsu, Shigeo Kimura, and Takahiro Kiwata

Phys. Rev. E 80, 041107 (2009) - Published 6 October, 2009

One-dimensional gravity in infinite point distributions

A. Gabrielli, M. Joyce, and F. Sicard

Phys. Rev. E 80, 041108 (2009) - Published 6 October, 2009

Effect of short ray trajectories on the scattering statistics of wave chaotic systems

J. A. Hart, T. M. Antonsen, Jr., and E. Ott

Phys. Rev. E 80, 041109 (2009) - Published 7 October, 2009

Stability measures in metastable states with Gaussian colored noise

Alessandro Fiasconaro and Bernardo Spagnolo

Phys. Rev. E 80, 041110 (2009) - Published 7 October, 2009

Lévy noises: Double stochastic resonance in a single-well potential

Bartłomiej Dybiec

Phys. Rev. E 80, 041111 (2009) - Published 7 October, 2009

Phase retrieval from speckle patterns of ordering systems

David Montiel, Mark Sutton, and Martin Grant

Phys. Rev. E 80, 041112 (2009) - Published 7 October, 2009

Quantum dissipative Brownian motion and the Casimir effect

Gert-Ludwig Ingold, Astrid Lambrecht, and Serge Reynaud

Phys. Rev. E 80, 041113 (2009) - Published 8 October, 2009

Stability analysis of phonon transport equations derived via the Chapman-Enskog method and transformation of variables

Zbigniew Banach, Wieslaw Larecki, and Wojciech Zajaczkowski

Phys. Rev. E 80, 041114 (2009) - Published 9 October, 2009

Patchy percolation on a hierarchical network with small-world bonds

Stefan Boettcher, Jessica L. Cook, and Robert M. Ziff

Phys. Rev. E 80, 041115 (2009) - Published 13 October, 2009

Minimum action method for the Kardar-Parisi-Zhang equation

Hans C. Fogedby and Weiqing Ren

Phys. Rev. E 80, 041116 (2009) - Published 15 October, 2009

Structure of physical crystalline membranes within the self-consistent screening approximation

Doron Gazit

Phys. Rev. E 80, 041117 (2009) - Published 15 October, 2009

Critical percolation phase and thermal Berezinskii-Kosterlitz-Thouless transition in a scale-free network with short-range and long-range random bonds

A. Nihat Berker, Michael Hinczewski, and Roland R. Netz

Phys. Rev. E 80, 041118 (2009) - Published 15 October, 2009

Quantum heat engines and nonequilibrium temperature

Ramandeep S. Johal

Phys. Rev. E 80, 041119 (2009) - Published 15 October, 2009

Reaction under vacancy-assisted diffusion at high quencher concentration

Kazuhiko Seki and M. Tachiya

Phys. Rev. E 80, 041120 (2009) - Published 16 October, 2009

Persistence effects in deterministic diffusion

Thomas Gilbert and David P. Sanders

Phys. Rev. E 80, 041121 (2009) - Published 16 October, 2009

Investigation of film surface roughness and porosity dependence on lattice size in a porous thin film deposition process

Gangshi Hu, Jianqiao Huang, Gerassimos Orkoulas, and Panagiotis D. Christofides

Phys. Rev. E 80, 041122 (2009) - Published 21 October, 2009

Scaling behavior of the contact process in networks with long-range connections

Róbert Juhász and Géza Ódor

Phys. Rev. E 80, 041123 (2009) - Published 21 October, 2009

Improving fast-switching free energy estimates by dynamical freezing

Paolo Nicolini and Riccardo Chelli

Phys. Rev. E 80, 041124 (2009) - Published 22 October, 2009

Field-driven transition in an Ising magnet with mixed interactions

S. L. A. de Queiroz

Phys. Rev. E 80, 041125 (2009) - Published 22 October, 2009

Nonequilibrium Monte Carlo simulation for a driven Brownian particle

Phil Attard

Phys. Rev. E 80, 041126 (2009) - Published 23 October, 2009

Quantum transport in a periodic symmetric potential of a driven quantum system

Satyabrata Bhattacharya, Pinaki Chaudhury, Sudip Chattopadhyay, and Jyotipratim Ray Chaudhuri

Phys. Rev. E 80, 041127 (2009) - Published 23 October, 2009

Understanding totally asymmetric simple-exclusion-process transport on networks: Generic analysis via effective rates and explicit vertices

Ben Embley, Andrea Parmeggiani, and Norbert Kern

Phys. Rev. E 80, 041128 (2009) - Published 26 October, 2009

Nonlinear $q$ -voter model

Claudio Castellano, Miguel A. Muñoz, and Romualdo Pastor-Satorras

Phys. Rev. E 80, 041129 (2009) - Published 26 October, 2009

WKB theory of epidemic fade-out in stochastic populations

Baruch Meerson and Pavel V. Sasorov

Phys. Rev. E 80, 041130 (2009) - Published 27 October, 2009

Exact results for the Barabási queuing model

C. Anteneodo

Phys. Rev. E 80, 041131 (2009) - Published 27 October, 2009

Strong field line shapes and photon statistics from a single molecule under anomalous noise

František Šanda

Phys. Rev. E 80, 041132 (2009) - Published 28 October, 2009

Kinetic equation approach to the description of quantum surface diffusion: Non-Markovian effects versus jump dynamics

V. V. Ignatyuk

Phys. Rev. E 80, 041133 (2009) - Published 30 October, 2009

Planar bifurcation subject to multiplicative noise: Role of symmetry

Alexandros Alexakis and François Pétrélis

Phys. Rev. E 80, 041134 (2009) - Published 30 October, 2009

Equilibrium and linear transport properties of fluids

Linear transport equations valid for arbitrary collisionality: Comparison with the Chapman-Enskog expansion

A. Bendib, K. Bendib-Kalache, and M.-M. Gombert

Phys. Rev. E 80, 041201 (2009) - Published 2 October, 2009

Granular materials

Towards precise prediction of transport properties from synthetic computer tomography of reconstructed porous media

B. Biswal, R. J. Held, V. Khanna, J. Wang, and R. Hilfer

Phys. Rev. E 80, 041301 (2009) - Published 2 October, 2009

Compaction dynamics of a magnetized powder

G. Lumay, S. Dorbolo, and N. Vandewalle

Phys. Rev. E 80, 041302 (2009) - Published 2 October, 2009

Partitioning of energy in highly polydisperse granular gases

H. Uecker, W. T. Kranz, T. Aspelmeier, and A. Zippelius

Phys. Rev. E 80, 041303 (2009) - Published 9 October, 2009

Long-wavelength structural anomalies in jammed systems

Leonardo E. Silbert and Moises Silbert

Phys. Rev. E 80, 041304 (2009) - Published 14 October, 2009

Effect of noise on solid-to-liquid transition in small granular systems under shear

Martin F. Melhus, Igor S. Aranson, Dmitri Volfson, and Lev S. Tsimring

Phys. Rev. E 80, 041305 (2009) - Published 15 October, 2009

Hydrodynamic character of the nonequipartition of kinetic energy in binary granular gases

J. Javier Brey and M. J. Ruiz-Montero

Phys. Rev. E 80, 041306 (2009) - Published 20 October, 2009

Colloidal dispersions, suspensions, and aggregates

Experimental evidence for reversible zippering of chains in magnetic nanofluids under external magnetic fields

Junaid M. Laskar, John Philip, and Baldev Raj

Phys. Rev. E 80, 041401 (2009) - Published 16 October, 2009

Poisson-Boltzmann cell model for heterogeneously charged colloids

Eelco Eggen and René van Roij

Phys. Rev. E 80, 041402 (2009) - Published 27 October, 2009

Structured and complex fluids

Tracking gas-liquid coexistence in fluids of charged soft dumbbells

Heiko Braun and Reinhard Hentschke

Phys. Rev. E 80, 041501 (2009) - Published 2 October, 2009

Hidden scale invariance in molecular van der Waals liquids: A simulation study

Thomas B. Schrøder, Ulf R. Pedersen, Nicholas P. Bailey, Søren Toxvaerd, and Jeppe C. Dyre

Phys. Rev. E 80, 041502 (2009) - Published 13 October, 2009

Unconstrained motions, dynamic heterogeneities, and relaxation in disordered solids

Vanessa K. de Souza and Peter Harrowell

Phys. Rev. E 80, 041503 (2009) - Published 14 October, 2009

Rotational dynamics and aging in a magnetic colloidal glass

E. Wandersman, V. Dupuis, E. Dubois, and R. Perzynski

Phys. Rev. E 80, 041504 (2009) - Published 21 October, 2009

Dynamical heterogeneity in binary mixtures of low-molecular-weight glass formers

Daniele Cangialosi, Angel Alegría, and Juan Colmenero

Phys. Rev. E 80, 041505 (2009) - Published 27 October, 2009

Films, interfaces, and crystal growth

Experimental validation of the Helmoltz equation for the surface potential of Langmuir monolayers

Abdel I. El Abed

Phys. Rev. E 80, 041601 (2009) - Published 6 October, 2009

Island-size distribution and capture numbers in three-dimensional nucleation: Dependence on island morphology

John Royston and Jacques G. Amar

Phys. Rev. E 80, 041602 (2009) - Published 13 October, 2009

Theory of rotating electrohydrodynamic flows in a liquid film

E. V. Shiryaeva, V. A. Vladimirov, and M. Yu. Zhukov

Phys. Rev. E 80, 041603 (2009) - Published 16 October, 2009

Reducing the surface roughness beyond the pulsed-laser-deposition limit

E. Vasco, C. Polop, and J. L. Sacedón

Phys. Rev. E 80, 041604 (2009) - Published 23 October, 2009

Liquid crystals

Symmetry-dependent defect structures in soft-mode turbulence

Rinto Anugraha, Yoshiki Hidaka, Tatsuhiro Ueki, and Shoichi Kai

Phys. Rev. E 80, 041701 (2009) - Published 2 October, 2009

Reorientation effect and electrical current in a weakly anchored nematic cell

R. Teixeira de Souza, M. M. A. de Jesus, J. C. Dias, and L. R. Evangelista

Phys. Rev. E 80, 041702 (2009) - Published 7 October, 2009

Concentration, temperature, and $p H$ dependence of sunset-yellow aggregates in aqueous solutions: An x-ray investigation

Leela Joshi, Shin-Woong Kang, Dena Mae Agra-Kooijman, and Satyendra Kumar

Phys. Rev. E 80, 041703 (2009) - Published 7 October, 2009

Stable smectic phase in suspensions of polydisperse colloidal platelets with identical thickness

Dazhi Sun, Hung-Jue Sue, Zhengdong Cheng, Yuri Martínez-Ratón, and Enrique Velasco

Phys. Rev. E 80, 041704 (2009) - Published 15 October, 2009

Biaxiality at the isotropic-nematic interface with planar anchoring

S. M. Kamil, A. K. Bhattacharjee, R. Adhikari, and Gautam I. Menon

Phys. Rev. E 80, 041705 (2009) - Published 21 October, 2009

Flow-driven transition and associated velocity profiles in a nematic liquid-crystal cell

S. A. Jewell, S. L. Cornford, F. Yang, P. S. Cann, and J. R. Sambles

Phys. Rev. E 80, 041706 (2009) - Published 26 October, 2009

Unwinding of the uniform lying helix structure in cholesteric liquid crystals next to a spatially uniform aligning surface

Patrick S. Salter, Giovanni Carbone, Sharon A. Jewell, Steve J. Elston, and Peter Raynes

Phys. Rev. E 80, 041707 (2009) - Published 27 October, 2009

Modeling dipolar and quadrupolar defect structures generated by chiral islands in freely suspended liquid crystal films

N. M. Silvestre, P. Patrício, M. M. Telo da Gama, A. Pattanaporkratana, C. S. Park, J. E. Maclennan, and N. A. Clark

Phys. Rev. E 80, 041708 (2009) - Published 30 October, 2009

Polymers

Microphase separation of comb copolymers with two different lengths of side chains

M. A. Aliev and N. Yu. Kuzminyh

Phys. Rev. E 80, 041801 (2009) - Published 6 October, 2009

Polymer chains in confined geometries: Massive field theory approach

D. Romeis and Z. Usatenko

Phys. Rev. E 80, 041802 (2009) - Published 7 October, 2009

Detailed scaling analysis of low-force polyelectrolyte elasticity

D. B. McIntosh, N. Ribeck, and O. A. Saleh

Phys. Rev. E 80, 041803 (2009) - Published 7 October, 2009

Grand-canonical and canonical solution of self-avoiding walks with up to three monomers per site on the Bethe lattice

Tiago J. Oliveira, Jürgen F. Stilck, and Pablo Serra

Phys. Rev. E 80, 041804 (2009) - Published 14 October, 2009

Characterization of the “simple-liquid” state in a polymeric system: Coherent and incoherent scattering functions

A. Arbe and J. Colmenero

Phys. Rev. E 80, 041805 (2009) - Published 14 October, 2009

Conformational free energy of melts of ring-linear polymer blends

Gopinath Subramanian and Sachin Shanbhag

Phys. Rev. E 80, 041806 (2009) - Published 21 October, 2009

Storage shear modulus of columnar structure formed in an immiscible polymer blend under electric fields

Kohei Aida, Yang Ho Na, Tomoyuki Nagaya, and Hiroshi Orihara

Phys. Rev. E 80, 041807 (2009) - Published 26 October, 2009

Entangled chain dynamics of polymer knots in extensional flow

Demosthenes Kivotides, S. Louise Wilkin, and Theo G. Theofanous

Phys. Rev. E 80, 041808 (2009) - Published 29 October, 2009

Renormalized field theory of collapsing directed randomly branched polymers

Hans-Karl Janssen, Frank Wevelsiep, and Olaf Stenull

Phys. Rev. E 80, 041809 (2009) - Published 30 October, 2009

Biological physics

Compartmentalization of second messengers in neurons: A mathematical analysis

Wen Chen, Herbert Levine, and Wouter-Jan Rappel

Phys. Rev. E 80, 041901 (2009) - Published 2 October, 2009

Morphogen profiles can be optimized to buffer against noise

Timothy E. Saunders and Martin Howard

Phys. Rev. E 80, 041902 (2009) - Published 2 October, 2009

Evolutionary dynamics on rugged fitness landscapes: Exact dynamics and information theoretical aspects

David B. Saakian and José F. Fontanari

Phys. Rev. E 80, 041903 (2009) - Published 2 October, 2009

Localized short impulses in a nerve model with self-excitable membrane

Alain M. Dikandé and Ga-Akeku Bartholomew

Phys. Rev. E 80, 041904 (2009) - Published 5 October, 2009

Computational analysis of the tether-pulling experiment to probe plasma membrane-cytoskeleton interaction in cells

Kristopher R. Schumacher, Aleksander S. Popel, Bahman Anvari, William E. Brownell, and Alexander A. Spector

Phys. Rev. E 80, 041905 (2009) - Published 6 October, 2009

Elongation dynamics of amyloid fibrils: A rugged energy landscape picture

Chiu Fan Lee (李超帆), James Loken, Létitia Jean, and David J. Vaux

Phys. Rev. E 80, 041906 (2009) - Published 6 October, 2009

Fluctuations and dispersal rates in population dynamics

David A. Kessler and Leonard M. Sander

Phys. Rev. E 80, 041907 (2009) - Published 6 October, 2009

Self-similarity and protein compactness

M. A. Moret, M. C. Santana, G. F. Zebende, and P. G. Pascutti

Phys. Rev. E 80, 041908 (2009) - Published 6 October, 2009

Simulations of impulsive laser scattering of biological protein assemblies: Application to M13 bacteriophage

Eric C. Dykeman, Daryn Benson, K.-T. Tsen, and Otto F. Sankey

Phys. Rev. E 80, 041909 (2009) - Published 7 October, 2009

Adsorption of a hydrophobic-polar-model heteropolymer in an attractive nanotube

Handan Arkin

Phys. Rev. E 80, 041910 (2009) - Published 8 October, 2009

Analytical description of Ogston-regime biomolecule separation using nanofilters and nanopores

Zi Rui Li, Gui Rong Liu, Jongyoon Han, Yuan Cheng, Yu Zong Chen, Jian-Sheng Wang, and Nicolas G. Hadjiconstantinou

Phys. Rev. E 80, 041911 (2009) - Published 8 October, 2009

Dynamics of driven recurrent networks of ON and OFF cells

Jérémie Lefebvre, André Longtin, and Victor G. LeBlanc

Phys. Rev. E 80, 041912 (2009) - Published 9 October, 2009

Kinetic overshoot in actin network assembly induced jointly by branching and capping proteins

Hyeran Kang, Anders E. Carlsson, and Jay X. Tang

Phys. Rev. E 80, 041913 (2009) - Published 9 October, 2009

Aggregation of fibrils and plaques in amyloid molecular systems

Mario Nicodemi, Antonio de Candia, and Antonio Coniglio

Phys. Rev. E 80, 041914 (2009) - Published 12 October, 2009

Effects of fluid flow on the oligonucleotide folding in single-walled carbon nanotubes

M C. G. Lim and Z. W. Zhong

Phys. Rev. E 80, 041915 (2009) - Published 12 October, 2009

Predictions from a stochastic polymer model for the MinDE protein dynamics in Escherichia coli

Peter Borowski and Eric N. Cytrynbaum

Phys. Rev. E 80, 041916 (2009) - Published 12 October, 2009

Finding human promoter groups based on DNA physical properties

Jia Zeng, Xiao-Qin Cao, Hongya Zhao, and Hong Yan

Phys. Rev. E 80, 041917 (2009) - Published 13 October, 2009

Parameter effects on binding chemistry in crowded media using a two-dimensional stochastic off-lattice model

Byoungkoo Lee, Philip R. LeDuc, and Russell Schwartz

Phys. Rev. E 80, 041918 (2009) - Published 14 October, 2009

Micromagnetic insight into a magnetoreceptor in birds: Existence of magnetic field amplifiers in the beak

Ilia A. Solov’yov and Walter Greiner

Phys. Rev. E 80, 041919 (2009) - Published 14 October, 2009

Analysis and Monte Carlo simulations of a model for the spread of infectious diseases in heterogeneous metapopulations

David Juher, Jordi Ripoll, and Joan Saldaña

Phys. Rev. E 80, 041920 (2009) - Published 20 October, 2009

Spectral solutions to stochastic models of gene expression with bursts and regulation

Andrew Mugler, Aleksandra M. Walczak, and Chris H. Wiggins

Phys. Rev. E 80, 041921 (2009) - Published 20 October, 2009

Three-dimensional model for the effective viscosity of bacterial suspensions

Brian M. Haines, Andrey Sokolov, Igor S. Aranson, Leonid Berlyand, and Dmitry A. Karpeev

Phys. Rev. E 80, 041922 (2009) - Published 22 October, 2009

Force-velocity relations for multiple-molecular-motor transport

Ziqing Wang and Ming Li

Phys. Rev. E 80, 041923 (2009) - Published 22 October, 2009

Phase coexistence and line tension in ternary lipid systems

T. Idema, J. M. J. van Leeuwen, and C. Storm

Phys. Rev. E 80, 041924 (2009) - Published 23 October, 2009

Ionic conductivity on a wetting surface

Brian Skinner, M. S. Loth, and B. I. Shklovksii

Phys. Rev. E 80, 041925 (2009) - Published 23 October, 2009

Topological phase transition in a RNA model in the de Gennes regime

Matías G. dell’Erba and Guillermo R. Zemba

Phys. Rev. E 80, 041926 (2009) - Published 23 October, 2009

Self-assembly of polypeptides into left-handedly twisted fibril-like structures

Yan Mu and Yi Qin Gao

Phys. Rev. E 80, 041927 (2009) - Published 26 October, 2009

Traffic by multiple species of molecular motors

Yan Chai, Stefan Klumpp, Melanie J. I. Müller, and Reinhard Lipowsky

Phys. Rev. E 80, 041928 (2009) - Published 28 October, 2009

Mechanical properties of interacting lipopolysaccharide membranes from bacteria mutants studied by specular and off-specular neutron scattering

Emanuel Schneck, Rafael G. Oliveira, Florian Rehfeldt, Bruno Demé, Klaus Brandenburg, Ulrich Seydel, and Motomu Tanaka

Phys. Rev. E 80, 041929 (2009) - Published 28 October, 2009

Simple model for bursting dynamics of neurons

Anandamohan Ghosh, Dipanjan Roy, and Viktor K. Jirsa

Phys. Rev. E 80, 041930 (2009) - Published 29 October, 2009

Ubiquitous “glassy” relaxation in catalytic reaction networks

Akinori Awazu and Kunihiko Kaneko

Phys. Rev. E 80, 041931 (2009) - Published 30 October, 2009

BRIEF REPORTS

Statistical physics

Quantum Smoluchowski equation for driven systems

Raoul Dillenschneider and Eric Lutz

Phys. Rev. E 80, 042101 (2009) - Published 21 October, 2009

Emergence of stability in a stochastically driven pendulum: Beyond the Kapitsa pendulum

Yuval B. Simons and Baruch Meerson

Phys. Rev. E 80, 042102 (2009) - Published 27 October, 2009

Six-state clock model on the square lattice: Fisher zero approach with Wang-Landau sampling

Chi-Ok Hwang

Phys. Rev. E 80, 042103 (2009) - Published 29 October, 2009

Critical Binder cumulant in a two-dimensional anisotropic Ising model with competing interactions

W. Selke and L. N. Shchur

Phys. Rev. E 80, 042104 (2009) - Published 30 October, 2009

Granular materials

Mixing and segregation rates in sheared granular materials

Laura A. Golick and Karen E. Daniels

Phys. Rev. E 80, 042301 (2009) - Published 16 October, 2009

Films, interfaces, and crystal growth

Enhancement of charge inversion by multivalent interfacial groups

Carles Calero and Jordi Faraudo

Phys. Rev. E 80, 042601 (2009) - Published 9 October, 2009

Liquid crystals

Light paths in a ferronematic cell

Caio Sátiro

Phys. Rev. E 80, 042701 (2009) - Published 6 October, 2009

Long-range elastic-mediated interaction between nanoparticles adsorbed on free-standing smectic films

I. N. de Oliveira, M. S. S. Pereira, M. L. Lyra, C. Filgueiras, C. Sátiro, and Fernando Moraes

Phys. Rev. E 80, 042702 (2009) - Published 14 October, 2009

Structural characteristics of the B6 phase for a bent-core molecular system observed through the B1-B6 transition

Sungmin Kang, Seng Kue Lee, Masatoshi Tokita, and Junji Watanabe

Phys. Rev. E 80, 042703 (2009) - Published 21 October, 2009

Polymers

Microscopic density functional theory for dendrimers

Alexandr Malijevský

Phys. Rev. E 80, 042801 (2009) - Published 27 October, 2009

Biological physics

Cell adhesion: The effect of a surprising cohesive force

H. Vasseur

Phys. Rev. E 80, 042901 (2009) - Published 9 October, 2009

RAPID COMMUNICATIONS

Interdisciplinary physics

RAPID COMMUNICATION

Interplay between structural randomness, composite disorder, and electrical response: Resonances and transient delays in complex impedance networks

R. Huang, G. Korniss, and S. K. Nayak

Phys. Rev. E 80, 045101(R) (2009) - Published 1 October, 2009

RAPID COMMUNICATION

Entropy measures for networks: Toward an information theory of complex topologies

Kartik Anand and Ginestra Bianconi

Phys. Rev. E 80, 045102(R) (2009) - Published 13 October, 2009

Chaos and pattern formation

RAPID COMMUNICATION

Equivalence between the mobility edge of electronic transport on disorderless networks and the onset of chaos via intermittency in deterministic maps

M. Martínez-Mares and A. Robledo

Phys. Rev. E 80, 045201(R) (2009) - Published 19 October, 2009

RAPID COMMUNICATION

Boolean chaos

Rui Zhang, Hugo L. D. de S.Cavalcante, Zheng Gao, Daniel J. Gauthier, Joshua E. S. Socolar, Matthew M. Adams, and Daniel P. Lathrop

Phys. Rev. E 80, 045202(R) (2009) - Published 27 October, 2009

Fluid dynamics

RAPID COMMUNICATION

Spirals vortices in Taylor-Couette flow with rotating endwalls

M. Heise, K. Hochstrate, J. Abshagen, and G. Pfister

Phys. Rev. E 80, 045301(R) (2009) - Published 8 October, 2009

Plasma physics

RAPID COMMUNICATION

Effect of reentrant cone geometry on energy transport in intense laser-plasma interactions

K. L. Lancaster et al.

Phys. Rev. E 80, 045401(R) (2009) - Published 22 October, 2009

ARTICLES

Interdisciplinary physics

Spectral analysis of deformed random networks

Sarika Jalan

Phys. Rev. E 80, 046101 (2009) - Published 1 October, 2009

Weak signal transmission in complex networks and its application in detecting connectivity

Xiaoming Liang, Zonghua Liu, and Baowen Li

Phys. Rev. E 80, 046102 (2009) - Published 6 October, 2009

Horizontal visibility graphs: Exact results for random time series

B. Luque, L. Lacasa, F. Ballesteros, and J. Luque

Phys. Rev. E 80, 046103 (2009) - Published 7 October, 2009

Quantifying the connectivity of a network: The network correlation function method

Baruch Barzel and Ofer Biham

Phys. Rev. E 80, 046104 (2009) - Published 7 October, 2009

Spontaneous dissipation of elastic energy by self-localizing thermal runaway

S. Braeck, Y. Y. Podladchikov, and S. Medvedev

Phys. Rev. E 80, 046105 (2009) - Published 8 October, 2009

Effect of spatial structure on the evolution of cooperation

Carlos P. Roca, José A. Cuesta, and Angel Sánchez

Phys. Rev. E 80, 046106 (2009) - Published 8 October, 2009

Phase field crystal study of deformation and plasticity in nanocrystalline materials

Peter Stefanovic, Mikko Haataja, and Nikolas Provatas

Phys. Rev. E 80, 046107 (2009) - Published 13 October, 2009

Effects of social diversity on the emergence of global consensus in opinion dynamics

Han-Xin Yang, Zhi-Xi Wu, Changsong Zhou, Tao Zhou, and Bing-Hong Wang

Phys. Rev. E 80, 046108 (2009) - Published 14 October, 2009

Cooperation enhanced by moderate tolerance ranges in myopically selective interactions

Xiaojie Chen and Long Wang

Phys. Rev. E 80, 046109 (2009) - Published 14 October, 2009

Random graph models for directed acyclic networks

Brian Karrer and M. E. J. Newman

Phys. Rev. E 80, 046110 (2009) - Published 15 October, 2009

Absence of depletion zone effects for the trapping reaction in complex networks

Aristotelis Kittas and Panos Argyrakis

Phys. Rev. E 80, 046111 (2009) - Published 16 October, 2009

Message passing for optimization and control of a power grid: Model of a distribution system with redundancy

Lenka Zdeborová, Aurélien Decelle, and Michael Chertkov

Phys. Rev. E 80, 046112 (2009) - Published 19 October, 2009

Difference between fracture of thin brittle sheets and two-dimensional fracture

J. A. Åström

Phys. Rev. E 80, 046113 (2009) - Published 19 October, 2009

Analysis of relative influence of nodes in directed networks

Naoki Masuda, Yoji Kawamura, and Hiroshi Kori

Phys. Rev. E 80, 046114 (2009) - Published 19 October, 2009

Patterned and disordered continuous Abelian sandpile model

N. Azimi-Tafreshi and S. Moghimi-Araghi

Phys. Rev. E 80, 046115 (2009) - Published 21 October, 2009

Eigenvalue spectra of spatial-dependent networks

Joris Billen, Mark Wilson, Arlette Baljon, and Avinoam Rabinovitch

Phys. Rev. E 80, 046116 (2009) - Published 21 October, 2009

Lagrangian field theory of reaction-diffusion

C. Cherubini and S. Filippi

Phys. Rev. E 80, 046117 (2009) - Published 22 October, 2009

Analytical small-time asymptotic properties of $A + B \to C$ fronts

P. M. J. Trevelyan

Phys. Rev. E 80, 046118 (2009) - Published 22 October, 2009

Interest rates in quantum finance: The Wilson expansion and Hamiltonian

Belal E. Baaquie

Phys. Rev. E 80, 046119 (2009) - Published 26 October, 2009

Fracture surface statistics of filled elastomers

Thomas Horst, Katrin Reincke, Sybill Ilisch, Gert Heinrich, and Wolfgang Grellmann

Phys. Rev. E 80, 046120 (2009) - Published 26 October, 2009

Analytical results for bond percolation and $k$ -core sizes on clustered networks

James P. Gleeson and Sergey Melnik

Phys. Rev. E 80, 046121 (2009) - Published 26 October, 2009

Similarity index based on local paths for link prediction of complex networks

Linyuan Lü, Ci-Hang Jin, and Tao Zhou

Phys. Rev. E 80, 046122 (2009) - Published 26 October, 2009

Residential segregation and cultural dissemination: An Axelrod-Schelling model

C. Gracia-Lázaro, L. F. Lafuerza, L. M. Floría, and Y. Moreno

Phys. Rev. E 80, 046123 (2009) - Published 26 October, 2009

Binding site models of friction due to the formation and rupture of bonds: State-function formalism, force-velocity relations, response to slip velocity transients, and slip stability

Manoj Srinivasan and Sam Walcott

Phys. Rev. E 80, 046124 (2009) - Published 26 October, 2009

Viscoelastic subdiffusion: From anomalous to normal

Igor Goychuk

Phys. Rev. E 80, 046125 (2009) - Published 28 October, 2009

Chaos and pattern formation

Rotating bouncing disks, tossing pizza dough, and the behavior of ultrasonic motors

Kuang-Chen Liu, James Friend, and Leslie Yeo

Phys. Rev. E 80, 046201 (2009) - Published 1 October, 2009

Intrinsic localized modes in parametrically driven arrays of nonlinear resonators

Eyal Kenig, Boris A. Malomed, M. C. Cross, and Ron Lifshitz

Phys. Rev. E 80, 046202 (2009) - Published 2 October, 2009

Statistics of resonance states in open chaotic systems: A perturbative approach

Charles Poli, Dmitry V. Savin, Olivier Legrand, and Fabrice Mortessagne

Phys. Rev. E 80, 046203 (2009) - Published 5 October, 2009

Recovery of chaotic tunneling due to destruction of dynamical localization by external noise

Akiyuki Ishikawa, Atushi Tanaka, and Akira Shudo

Phys. Rev. E 80, 046204 (2009) - Published 6 October, 2009

Exciting traffic jams: Nonlinear phenomena behind traffic jam formation on highways

Gábor Orosz, R. Eddie Wilson, Róbert Szalai, and Gábor Stépán

Phys. Rev. E 80, 046205 (2009) - Published 6 October, 2009

Dynamics of chaotic systems with attractive and repulsive couplings

Yuehua Chen, Jinghua Xiao, Weiqing Liu, Lixiang Li, and Yixian Yang

Phys. Rev. E 80, 046206 (2009) - Published 14 October, 2009

Using the minimum description length principle for global reconstruction of dynamic systems from noisy time series

Ya. I. Molkov, D. N. Mukhin, E. M. Loskutov, A. M. Feigin, and G. A. Fidelin

Phys. Rev. E 80, 046207 (2009) - Published 15 October, 2009

Rotational motion of traveling spots in dissipative systems

Takashi Teramoto, Katsuya Suzuki, and Yasumasa Nishiura

Phys. Rev. E 80, 046208 (2009) - Published 20 October, 2009

Propagating fronts in the complex Ginzburg-Landau equation generate fixed-width bands of plane waves

Matthew J. Smith and Jonathan A. Sherratt

Phys. Rev. E 80, 046209 (2009) - Published 20 October, 2009

Universality in the one-dimensional chain of phase-coupled oscillators

Tony E. Lee, G. Refael, M. C. Cross, Oleg Kogan, and Jeffrey L. Rogers

Phys. Rev. E 80, 046210 (2009) - Published 21 October, 2009

Periodically forced ensemble of nonlinearly coupled oscillators: From partial to full synchrony

Yernur Baibolatov, Michael Rosenblum, Zeinulla Zh. Zhanabaev, Meyramgul Kyzgarina, and Arkady Pikovsky

Phys. Rev. E 80, 046211 (2009) - Published 22 October, 2009

Time-delay-induced instabilities in reaction-diffusion systems

Shrabani Sen, Pushpita Ghosh, Syed Shahed Riaz, and Deb Shankar Ray

Phys. Rev. E 80, 046212 (2009) - Published 22 October, 2009

Understanding dynamics of the system using Hilbert phases: An application to study neonatal and fetal brain signals

R. B. Govindan, S. Vairavan, J. D. Wilson, H. Preissl, J. Vrba, C. L. Lowery, and H. Eswaran

Phys. Rev. E 80, 046213 (2009) - Published 23 October, 2009

Dynamical formation of stable irregular transients in discontinuous map systems

Hailin Zou, Shuguang Guan, and C.-H. Lai

Phys. Rev. E 80, 046214 (2009) - Published 23 October, 2009

Existence of hysteresis in the Kuramoto model with bimodal frequency distributions

Diego Pazó and Ernest Montbrió

Phys. Rev. E 80, 046215 (2009) - Published 23 October, 2009

Loschmidt echo and the local density of states

Natalia Ares and Diego A. Wisniacki

Phys. Rev. E 80, 046216 (2009) - Published 26 October, 2009

Modeling of a density oscillator

T. Kano and S. Kinoshita

Phys. Rev. E 80, 046217 (2009) - Published 27 October, 2009

Semiclassical description of wave packet revival

Fabricio Toscano, Raúl O. Vallejos, and Diego Wisniacki

Phys. Rev. E 80, 046218 (2009) - Published 27 October, 2009

Unified framework for detecting phase synchronization in coupled time series

Junfeng Sun and Michael Small

Phys. Rev. E 80, 046219 (2009) - Published 27 October, 2009

Predicting the coherence resonance curve using a semianalytical treatment

Santidan Biswas, Dibyendu Das, P. Parmananda, and Anirban Sain

Phys. Rev. E 80, 046220 (2009) - Published 29 October, 2009

Faceting and coarsening dynamics in the complex Swift-Hohenberg equation

Lendert Gelens and Edgar Knobloch

Phys. Rev. E 80, 046221 (2009) - Published 30 October, 2009

Fluid dynamics

Exact vectorial law for homogeneous rotating turbulence

Sébastien Galtier

Phys. Rev. E 80, 046301 (2009) - Published 1 October, 2009

Influence of anisotropy on anomalous scaling of a passive scalar advected by the Navier-Stokes velocity field

E. Jurčišinová, M. Jurčišin, and R. Remecký

Phys. Rev. E 80, 046302 (2009) - Published 2 October, 2009

Electrically initiated upstream coalescence cascade of droplets in a microfluidic flow

Michele Zagnoni, Charles N. Baroud, and Jonathan M. Cooper

Phys. Rev. E 80, 046303 (2009) - Published 2 October, 2009

Scaling and memory in the return intervals of energy dissipation rate in three-dimensional fully developed turbulence

Chuang Liu (刘闯), Zhi-Qiang Jiang (蒋志强), Fei Ren (任飞), and Wei-Xing Zhou (周炜星)

Phys. Rev. E 80, 046304 (2009) - Published 5 October, 2009

Linear analysis of incompressible Rayleigh-Taylor instability in solids

A. R. Piriz, J. J. López Cela, and N. A. Tahir

Phys. Rev. E 80, 046305 (2009) - Published 6 October, 2009

Stagnation point von Kármán coefficient

V. Dallas, J. C. Vassilicos, and G. F. Hewitt

Phys. Rev. E 80, 046306 (2009) - Published 6 October, 2009

Basics of lava-lamp convection

Balázs Gyüre and Imre M. Jánosi

Phys. Rev. E 80, 046307 (2009) - Published 8 October, 2009

Kinematic $α$ effect in the presence of a large-scale motion

Alice Courvoisier and Eun-jin Kim

Phys. Rev. E 80, 046308 (2009) - Published 9 October, 2009

Negative refraction, surface modes, and superlensing effect via homogenization near resonances for a finite array of split-ring resonators

M. Farhat, S. Guenneau, S. Enoch, and A. B. Movchan

Phys. Rev. E 80, 046309 (2009) - Published 12 October, 2009

Numerical simulation of gas-phonon coupling in thermal transpiration flows

Xiaohui Guo, Dhruv Singh, Jayathi Murthy, and Alina A. Alexeenko

Phys. Rev. E 80, 046310 (2009) - Published 15 October, 2009

Nonlocal form of the rapid pressure-strain correlation in turbulent flows

Peter E. Hamlington and Werner J. A. Dahm

Phys. Rev. E 80, 046311 (2009) - Published 15 October, 2009

Analysis of induced-charge electro-osmotic flow in a microchannel embedded with polarizable dielectric blocks

Cunlu Zhao and Chun Yang

Phys. Rev. E 80, 046312 (2009) - Published 15 October, 2009

Field-controlled adhesion in confined magnetorheological fluids

Sérgio A. Lira and José A. Miranda

Phys. Rev. E 80, 046313 (2009) - Published 20 October, 2009

Eddy diffusivity from hydromagnetic Taylor-Couette flow experiments

Marcus Gellert and Günther Rüdiger

Phys. Rev. E 80, 046314 (2009) - Published 22 October, 2009

Instability mechanisms and transition scenarios of spiral turbulence in Taylor-Couette flow

Alvaro Meseguer, Fernando Mellibovsky, Marc Avila, and Francisco Marques

Phys. Rev. E 80, 046315 (2009) - Published 23 October, 2009

Homologous onset of double layer convection

F. H. Busse and M. Petry

Phys. Rev. E 80, 046316 (2009) - Published 23 October, 2009

Two-dimensional supersonic nonlinear Schrödinger flow past an extended obstacle

G. A. El, A. M. Kamchatnov, V. V. Khodorovskii, E. S. Annibale, and A. Gammal

Phys. Rev. E 80, 046317 (2009) - Published 26 October, 2009

Evaporation and capillary coupling across vertical textural contrasts in porous media

Peter Lehmann and Dani Or

Phys. Rev. E 80, 046318 (2009) - Published 27 October, 2009

Motion of a droplet through microfluidic ratchets

Jing Liu (刘晶), Yit Fatt Yap (叶逸发), and Nam-Trung Nguyen (阮南忠)

Phys. Rev. E 80, 046319 (2009) - Published 27 October, 2009

Diagnosing temperature change inside sonoluminescing bubbles by calculating line spectra

Yu An and Chaohui Li

Phys. Rev. E 80, 046320 (2009) - Published 28 October, 2009

Emergence of acoustic waves from vorticity fluctuations: Impact of non-normality

Joseph George and R. I. Sujith

Phys. Rev. E 80, 046321 (2009) - Published 28 October, 2009

Viscous properties of isotropic fluids composed of linear molecules: Departure from the classical Navier-Stokes theory in nano-confined geometries

J. S. Hansen, Peter J. Daivis, and B. D. Todd

Phys. Rev. E 80, 046322 (2009) - Published 28 October, 2009

Rehinging biflagellar locomotion in a viscous fluid

Saverio E. Spagnolie

Phys. Rev. E 80, 046323 (2009) - Published 30 October, 2009

Sedimentation of particles in a vigorously convecting fluid

G. Lavorel and M. Le Bars

Phys. Rev. E 80, 046324 (2009) - Published 30 October, 2009

Sonoluminescence radiation from different concentrations of sulfuric acid

A. Moshaii, Kh. Imani, and M. Silatani

Phys. Rev. E 80, 046325 (2009) - Published 30 October, 2009

Plasma physics

Waiting-time distributions of magnetic discontinuities: Clustering or Poisson process?

A. Greco, W. H. Matthaeus, S. Servidio, and P. Dmitruk

Phys. Rev. E 80, 046401 (2009) - Published 12 October, 2009

Gas flow driven by thermal creep in dusty plasma

T. M. Flanagan and J. Goree

Phys. Rev. E 80, 046402 (2009) - Published 13 October, 2009

Growth rate and the cutoff wavelength of the Darrieus-Landau instability in laser ablation

Mikhail Modestov, Vitaly Bychkov, Damir Valiev, and Mattias Marklund

Phys. Rev. E 80, 046403 (2009) - Published 14 October, 2009

Critical fluctuations and anomalous transport in soft Yukawa-Langevin systems

S. Ratynskaia, G. Regnoli, K. Rypdal, B. Klumov, and G. Morfill

Phys. Rev. E 80, 046404 (2009) - Published 16 October, 2009

Coulomb crystals in the magnetic field

D. A. Baiko

Phys. Rev. E 80, 046405 (2009) - Published 22 October, 2009

Solitary waves and double layers in a dusty electronegative plasma

A. A. Mamun, P. K. Shukla, and B. Eliasson

Phys. Rev. E 80, 046406 (2009) - Published 27 October, 2009

Transport coefficients in nonequilibrium gas-mixture flows with electronic excitation

E. V. Kustova and L. A. Puzyreva

Phys. Rev. E 80, 046407 (2009) - Published 28 October, 2009

Multiple scattering of slow ions in a partially degenerate electron fluid

Romain Popoff, Gilles Maynard, and Claude Deutsch

Phys. Rev. E 80, 046408 (2009) - Published 28 October, 2009

Quasitransient regimes of backward Raman amplification of intense x-ray pulses

V. M. Malkin and N. J. Fisch

Phys. Rev. E 80, 046409 (2009) - Published 29 October, 2009

Topological characterization of the transition from laminar regime to fully developed turbulence in the resistive pressure-gradient-driven turbulence model

L. Garcia, B. A. Carreras, I. Llerena, and I. Calvo

Phys. Rev. E 80, 046410 (2009) - Published 29 October, 2009

Classical physics

Power loss and electromagnetic energy density in a dispersive metamaterial medium

Pi-Gang Luan

Phys. Rev. E 80, 046601 (2009) - Published 5 October, 2009

FEATURED IN PHYSICS

Minimizing thermodynamic length to select intermediate states for free-energy calculations and replica-exchange simulations

Daniel K. Shenfeld, Huafeng Xu, Michael P. Eastwood, Ron O. Dror, and David E. Shaw

Phys. Rev. E 80, 046705 (2009) - Published 19 October, 2009

BRIEF REPORTS

Fluid dynamics

Cavitation bubble dynamics in microfluidic gaps of variable height

Pedro A. Quinto-Su, Kang Y. Lim, and Claus-Dieter Ohl

Phys. Rev. E 80, 047301 (2009) - Published 6 October, 2009

Plasma physics

Addendum to “Equation of state of classical Coulomb plasma mixtures”

A. Y. Potekhin, G. Chabrier, A. I. Chugunov, H. E. DeWitt, and F. J. Rogers

Phys. Rev. E 80, 047401 (2009) - Published 9 October, 2009

Effects of energy loss on interaction dynamics of energetic electrons with plasmas

C. K. Li and R. D. Petrasso

Phys. Rev. E 80, 047402 (2009) - Published 12 October, 2009

Computational physics

Multiresolution phase extension of a trypsin inhibitor structure from $5 Å$ to $2 Å$ based on diffraction amplitudes alone

Xiangan Liu and Wu-Pei Su

Phys. Rev. E 80, 047701 (2009) - Published 22 October, 2009

Generalization of the homogeneous nonequilibrium molecular dynamics method for calculating thermal conductivity to multibody potentials

Kranthi K. Mandadapu, Reese E. Jones, and Panayiotis Papadopoulos

Phys. Rev. E 80, 047702 (2009) - Published 29 October, 2009

COMMENTS

Comment on “Fundamentals of pair diffusion in kinematic simulations of turbulence”

B. J. Devenish and D. J. Thomson

Phys. Rev. E 80, 048301 (2009) - Published 23 October, 2009

ERRATA

Publisher's Note: Topology, symmetry, phase transitions, and noncollinear spin structures [Phys. Rev. E 80, 031123 (2009)]

F. A. N. Santos and M. D. Coutinho-Filho

Phys. Rev. E 80, 049901 (2009) - Published 1 October, 2009

Publisher's Note: From complex structures to complex processes: Percolation theory applied to the formation of a city [Phys. Rev. E 80, 037102 (2009)]

Agnieszka Bitner, Robert Hołyst, and Marcin Fiałkowski

Phys. Rev. E 80, 049902 (2009) - Published 2 October, 2009

Publisher's Note: Exact solutions to three-dimensional generalized nonlinear Schrödinger equations with varying potential and nonlinearities [Phys. Rev. E 80, 036607 (2009)]

Zhenya Yan and V. V. Konotop

Phys. Rev. E 80, 049903 (2009) - Published 13 October, 2009

Publisher's Note: Minimizing thermodynamic length to select intermediate states for free-energy calculations and replica-exchange simulations [Phys. Rev. E 80, 046705 (2009)]

Daniel K. Shenfeld, Huafeng Xu, Michael P. Eastwood, Ron O. Dror, and David E. Shaw

Phys. Rev. E 80, 049904 (2009) - Published 26 October, 2009