Volume 91, Issue 6

June 2015

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HIGHLIGHTED ARTICLES

FEATURED IN PHYSICS

Cascades in multiplex financial networks with debts of different seniority

Charles D. Brummitt and Teruyoshi Kobayashi

Phys. Rev. E 91, 062813 (2015) - Published 24 June, 2015

A model of a banking network predicts the balance of high- and low-priority debts that ensures financial stability.

EDITORS' SUGGESTION

RAPID COMMUNICATION

Spatial distribution of thermal energy in equilibrium

Yohai Bar-Sinai and Eran Bouchbinder

Phys. Rev. E 91, 060103(R) (2015) - Published 9 June, 2015

According to the equipartition theorem, in a classical system at equilibrium, thermal energy is equally distributed among the degrees of freedom appearing as quadratic forms in the Hamiltonian. Asking the question what is the spatial distribution of the thermal energy, the authors find a general upper bound and show that the details depend on dimensionality, interactions, and disorder.

EDITORS' SUGGESTION

Optimizing information flow in small genetic networks. IV. Spatial coupling

Thomas R. Sokolowski and Gašper Tkačik

Phys. Rev. E 91, 062710 (2015) - Published 15 June, 2015

The authors construct a spatial-stochastic model of gene regulation and analyze the effect of spatial coupling on the ability of a genetic network to specify positional information. They find conditions in which diffusive coupling can markedly improve information transmission in spatially coupled stochastic gene expression models.

EDITORS' SUGGESTION

Safe leads and lead changes in competitive team sports

A. Clauset, M. Kogan, and S. Redner

Phys. Rev. E 91, 062815 (2015) - Published 25 June, 2015

The evolution in time of the score in professional sports games can be described by a random walk. Based on this picture, the authors present a model showing that, surprisingly, the time of the last lead change and the time of the largest lead size are both governed by the arcsine law, a distribution that diverges at the start and at the end of the game.

EDITORS' SUGGESTION

Dusty plasma cavities: Probe-induced and natural

B. J. Harris, L. S. Matthews, and T. W. Hyde

Phys. Rev. E 91, 063105 (2015) - Published 22 June, 2015

The dust particles contained in a complex plasma can form two-dimensional crystals, and the authors experimentally study cavities formed in these crystals. They show that cavities that are produced by positively and negatively charged probes, and those that are naturally occurring, are due to three different mechanisms.

EDITORS' SUGGESTION

Cylindrical confinement of semiflexible polymers

Pablo Vázquez-Montejo, Zachary McDargh, Markus Deserno, and Jemal Guven

Phys. Rev. E 91, 063203 (2015) - Published 15 June, 2015

The authors study shapes and associated forces for a closed semiflexible polymer bound to the inside or the outside of a cylinder.

RAPID COMMUNICATIONS

Statistical Physics

RAPID COMMUNICATION

Weightless experiments to probe universality of fluid critical behavior

C. Lecoutre, R. Guillaument, S. Marre, Y. Garrabos, D. Beysens, and I. Hahn

Phys. Rev. E 91, 060101(R) (2015) - Published 8 June, 2015

RAPID COMMUNICATION

Statistical distribution of the Wigner-Smith time-delay matrix moments for chaotic cavities

Fabio Deelan Cunden

Phys. Rev. E 91, 060102(R) (2015) - Published 8 June, 2015

EDITORS' SUGGESTION

RAPID COMMUNICATION

Spatial distribution of thermal energy in equilibrium

Yohai Bar-Sinai and Eran Bouchbinder

Phys. Rev. E 91, 060103(R) (2015) - Published 9 June, 2015

RAPID COMMUNICATION

Topology-driven phase transitions in the classical monomer-dimer-loop model

Sazi Li, Wei Li, and Ziyu Chen

Phys. Rev. E 91, 060104(R) (2015) - Published 11 June, 2015

RAPID COMMUNICATION

Fluctuations in the two-dimensional one-component plasma and associated fourth-order phase transition

Fabio Deelan Cunden, Anna Maltsev, and Francesco Mezzadri

Phys. Rev. E 91, 060105(R) (2015) - Published 26 June, 2015

Granular Materials

RAPID COMMUNICATION

Universal scaling laws of diffusion in two-dimensional granular liquids

Chen-Hung Wang, Szu-Hsuan Yu, and Peilong Chen

Phys. Rev. E 91, 060201(R) (2015) - Published 1 June, 2015

Films, Interfaces, and Solids

RAPID COMMUNICATION

Avalanches in compressed Ti-Ni shape-memory porous alloys: An acoustic emission study

Daniel Soto-Parra, Xiaoxin Zhang, Shanshan Cao, Eduard Vives, Ekhard K. H. Salje, and Antoni Planes

Phys. Rev. E 91, 060401(R) (2015) - Published 17 June, 2015

Liquid Crystals

RAPID COMMUNICATION

Asymmetric counterpropagating fronts without flow

I. Andrade-Silva, M. G. Clerc, and V. Odent

Phys. Rev. E 91, 060501(R) (2015) - Published 15 June, 2015

Biological Physics

RAPID COMMUNICATION

Anomalous diffusion in neutral evolution of model proteins

Erik D. Nelson and Nick V. Grishin

Phys. Rev. E 91, 060701(R) (2015) - Published 1 June, 2015

RAPID COMMUNICATION

Model for melting of confined DNA

E. Werner, M. Reiter-Schad, T. Ambjörnsson, and B. Mehlig

Phys. Rev. E 91, 060702(R) (2015) - Published 26 June, 2015

Networks and Interdisciplinary Physics

RAPID COMMUNICATION

Analytic description of adaptive network topologies in a steady state

Stefan Wieland and Ana Nunes

Phys. Rev. E 91, 060801(R) (2015) - Published 26 June, 2015

Nonlinear Dynamics and Chaos

RAPID COMMUNICATION

Universality in spectral statistics of open quantum graphs

B. Gutkin and V. Al. Osipov

Phys. Rev. E 91, 060901(R) (2015) - Published 22 June, 2015

RAPID COMMUNICATION

Frequency assortativity can induce chaos in oscillator networks

Per Sebastian Skardal, Juan G. Restrepo, and Edward Ott

Phys. Rev. E 91, 060902(R) (2015) - Published 24 June, 2015

Fluid Dynamics

RAPID COMMUNICATION

Predicting the Knudsen paradox in long capillaries by decomposing the flow into ballistic and collision parts

Giorgos Tatsios, Stefan K. Stefanov, and Dimitris Valougeorgis

Phys. Rev. E 91, 061001(R) (2015) - Published 10 June, 2015

Computational Physics

RAPID COMMUNICATION

Extended Hamiltonian approach to continuous tempering

Gianpaolo Gobbo and Benedict J. Leimkuhler

Phys. Rev. E 91, 061301(R) (2015) - Published 19 June, 2015

ARTICLES

Statistical Physics

Totally asymmetric exclusion process fed by using a non-Poissonian clock

Juha Merikoski

Phys. Rev. E 91, 062101 (2015) - Published 3 June, 2015

Nonstationary filtered shot-noise processes and applications to neuronal membranes

Marco Brigham and Alain Destexhe

Phys. Rev. E 91, 062102 (2015) - Published 3 June, 2015

Reversible first-order transition in Pauli percolation

Mykola Maksymenko, Roderich Moessner, and Kirill Shtengel

Phys. Rev. E 91, 062103 (2015) - Published 4 June, 2015

Diffusion anomalies in ac-driven Brownian ratchets

Jakub Spiechowicz and Jerzy Łuczka

Phys. Rev. E 91, 062104 (2015) - Published 4 June, 2015

Full-order fluctuation-dissipation relation for a class of nonequilibrium steady states

Akihisa Ichiki and Masayuki Ohzeki

Phys. Rev. E 91, 062105 (2015) - Published 5 June, 2015

Entropy for quantum pure states and quantum $H$ theorem

Xizhi Han (韩希之) and Biao Wu (吴飙)

Phys. Rev. E 91, 062106 (2015) - Published 5 June, 2015

Interrupted coarsening in the zero-temperature kinetic Ising chain driven by a periodic external field

Su Do Yi and Seung Ki Baek

Phys. Rev. E 91, 062107 (2015) - Published 5 June, 2015

Landau-like theory for universality of critical exponents in quasistationary states of isolated mean-field systems

Shun Ogawa and Yoshiyuki Y. Yamaguchi

Phys. Rev. E 91, 062108 (2015) - Published 8 June, 2015

Dephasing and dissipation in qubit thermodynamics

J. P. Pekola, Y. Masuyama, Y. Nakamura, J. Bergli, and Y. M. Galperin

Phys. Rev. E 91, 062109 (2015) - Published 8 June, 2015

Ground-state statistics of directed polymers with heavy-tailed disorder

Thomas Gueudre, Pierre Le Doussal, Jean-Philippe Bouchaud, and Alberto Rosso

Phys. Rev. E 91, 062110 (2015) - Published 8 June, 2015

Thermodynamics of weakly coupled Falicov-Kimball chains from renormalization-group theory

Jozef Sznajd

Phys. Rev. E 91, 062111 (2015) - Published 8 June, 2015

Scaling relations and multicritical phenomena from functional renormalization

Igor Boettcher

Phys. Rev. E 91, 062112 (2015) - Published 10 June, 2015

Analyzing a stochastic time series obeying a second-order differential equation

B. Lehle and J. Peinke

Phys. Rev. E 91, 062113 (2015) - Published 10 June, 2015

Inverse-scattering-theory approach to the exact $n \to \infty$ solutions of $O (n) ϕ^{4}$ models on films and semi-infinite systems bounded by free surfaces

Sergei B. Rutkevich and H. W. Diehl

Phys. Rev. E 91, 062114 (2015) - Published 11 June, 2015

Ansatz for the quantum phase transition in a dissipative two-qubit system

Hang Zheng, Zhiguo Lü, and Yang Zhao

Phys. Rev. E 91, 062115 (2015) - Published 11 June, 2015

Minimal diffusion formulation of Markov chain ensembles and its application to ion channel clusters

Marifi Güler

Phys. Rev. E 91, 062116 (2015) - Published 12 June, 2015

Thermodynamics of information processing based on enzyme kinetics: An exactly solvable model of an information pump

Yuansheng Cao, Zongping Gong, and H. T. Quan

Phys. Rev. E 91, 062117 (2015) - Published 15 June, 2015

Overdamped limit and inverse-friction expansion for Brownian motion in an inhomogeneous medium

Xavier Durang, Chulan Kwon, and Hyunggyu Park

Phys. Rev. E 91, 062118 (2015) - Published 16 June, 2015

General transient solution of the one-step master equation in one dimension

Stephen Smith and Vahid Shahrezaei

Phys. Rev. E 91, 062119 (2015) - Published 16 June, 2015

Nonequilibrium statistical field theory for classical particles: Basic kinetic theory

Celia Viermann, Felix Fabis, Elena Kozlikin, Robert Lilow, and Matthias Bartelmann

Phys. Rev. E 91, 062120 (2015) - Published 16 June, 2015

Ising antiferromagnet on the Archimedean lattices

Unjong Yu

Phys. Rev. E 91, 062121 (2015) - Published 17 June, 2015

Phase ordering in disordered and inhomogeneous systems

Federico Corberi, Marco Zannetti, Eugenio Lippiello, Raffaella Burioni, and Alessandro Vezzani

Phys. Rev. E 91, 062122 (2015) - Published 18 June, 2015

Quantum correlations and energy currents across three dissipative oscillators

Antonio A. Valido, Antonia Ruiz, and Daniel Alonso

Phys. Rev. E 91, 062123 (2015) - Published 18 June, 2015

Rotational and translational diffusion in an interacting active dumbbell system

Leticia F. Cugliandolo, Giuseppe Gonnella, and Antonio Suma

Phys. Rev. E 91, 062124 (2015) - Published 18 June, 2015

Scaling hypothesis for the Euclidean bipartite matching problem. II. Correlation functions

Sergio Caracciolo and Gabriele Sicuro

Phys. Rev. E 91, 062125 (2015) - Published 18 June, 2015

Colonization of a territory by a stochastic population under a strong Allee effect and a low immigration pressure

Shay Be'er, Michael Assaf, and Baruch Meerson

Phys. Rev. E 91, 062126 (2015) - Published 19 June, 2015

Flow-parametric regulation of shear-driven phase separation in two and three dimensions

Lennon Ó Náraigh, Selma Shun, and Aurore Naso

Phys. Rev. E 91, 062127 (2015) - Published 19 June, 2015

Thermalization of entanglement

Liangsheng Zhang, Hyungwon Kim, and David A. Huse

Phys. Rev. E 91, 062128 (2015) - Published 19 June, 2015

Fluctuations around equilibrium laws in ergodic continuous-time random walks

Johannes H. P. Schulz and Eli Barkai

Phys. Rev. E 91, 062129 (2015) - Published 19 June, 2015

Super heat diffusion in one-dimensional momentum-conserving nonlinear lattices

Lei Wang (王雷), Zhiyuan Wu (吴志远), and Lubo Xu (续路波)

Phys. Rev. E 91, 062130 (2015) - Published 22 June, 2015

Anyonic behavior of an intermediate-statistics fermion gas model

Abdullah Algin, Dursun Irk, and Gozde Topcu

Phys. Rev. E 91, 062131 (2015) - Published 22 June, 2015

Nonlocal response functions for predicting shear flow of strongly inhomogeneous fluids. I. Sinusoidally driven shear and sinusoidally driven inhomogeneity

Kirill S. Glavatskiy, Benjamin A. Dalton, Peter J. Daivis, and B. D. Todd

Phys. Rev. E 91, 062132 (2015) - Published 22 June, 2015

Stochastic dynamics and logistic population growth

Vicenç Méndez, Michael Assaf, Daniel Campos, and Werner Horsthemke

Phys. Rev. E 91, 062133 (2015) - Published 24 June, 2015

Efficiency at maximum power of a quantum heat engine based on two coupled oscillators

Jianhui Wang, Zhuolin Ye, Yiming Lai, Weisheng Li, and Jizhou He

Phys. Rev. E 91, 062134 (2015) - Published 24 June, 2015

Ground-state phase-space structures of two-dimensional $\pm J$ spin glasses: A network approach

Xin Cao, Feng Wang, and Yilong Han

Phys. Rev. E 91, 062135 (2015) - Published 24 June, 2015

Zeroth law and nonequilibrium thermodynamics for steady states in contact

Sayani Chatterjee, Punyabrata Pradhan, and P. K. Mohanty

Phys. Rev. E 91, 062136 (2015) - Published 25 June, 2015

Performance of quantum Otto refrigerators with squeezing

Rui Long and Wei Liu

Phys. Rev. E 91, 062137 (2015) - Published 25 June, 2015

Equipartitions and a distribution for numbers: A statistical model for Benford's law

Joseph R. Iafrate, Steven J. Miller, and Frederick W. Strauch

Phys. Rev. E 91, 062138 (2015) - Published 29 June, 2015

Exact solution of the dimer model on the generalized finite checkerboard lattice

N. Sh. Izmailian, Chin-Kun Hu, and R. Kenna

Phys. Rev. E 91, 062139 (2015) - Published 29 June, 2015

Counterion density profile around a charged disk: From the weak to the strong association regime

Juan Pablo Mallarino and Gabriel Téllez

Phys. Rev. E 91, 062140 (2015) - Published 29 June, 2015

Nonuniversal surface behavior of dynamic phase transitions

Patricia Riego and Andreas Berger

Phys. Rev. E 91, 062141 (2015) - Published 29 June, 2015

Optimization of finite-size errors in finite-temperature calculations of unordered phases

Deepak Iyer, Mark Srednicki, and Marcos Rigol

Phys. Rev. E 91, 062142 (2015) - Published 29 June, 2015

Information thermodynamics of near-equilibrium computation

Mikhail Prokopenko and Itai Einav

Phys. Rev. E 91, 062143 (2015) - Published 29 June, 2015

Perturbative theory for Brownian vortexes

Henrique W. Moyses, Ross O. Bauer, Alexander Y. Grosberg, and David G. Grier

Phys. Rev. E 91, 062144 (2015) - Published 30 June, 2015

Granular Materials

Arrest stress of uniformly sheared wet granular matter

S. H. Ebrahimnazhad Rahbari, M. Brinkmann, and J. Vollmer

Phys. Rev. E 91, 062201 (2015) - Published 4 June, 2015

Structural and mechanical features of the order-disorder transition in experimental hard-sphere packings

M. Hanifpour, N. Francois, V. Robins, A. Kingston, S. M. Vaez Allaei, and M. Saadatfar

Phys. Rev. E 91, 062202 (2015) - Published 5 June, 2015

Stability of clogging arches in a silo submitted to vertical vibrations

C. Lozano, I. Zuriguel, and A. Garcimartín

Phys. Rev. E 91, 062203 (2015) - Published 5 June, 2015

Network flow model of force transmission in unbonded and bonded granular media

Antoinette Tordesillas, Steven T. Tobin, Mehmet Cil, Khalid Alshibli, and Robert P. Behringer

Phys. Rev. E 91, 062204 (2015) - Published 8 June, 2015

Pattern formation in a sandpile of ternary granular mixtures

Michiko Shimokawa, Yuki Suetsugu, Ryoma Hiroshige, Takeru Hirano, and Hidetsugu Sakaguchi

Phys. Rev. E 91, 062205 (2015) - Published 9 June, 2015

Unified theory of inertial granular flows and non-Brownian suspensions

E. DeGiuli, G. Düring, E. Lerner, and M. Wyart

Phys. Rev. E 91, 062206 (2015) - Published 9 June, 2015

Ordering in granular-rod monolayers driven far from thermodynamic equilibrium

Thomas Müller, Daniel de las Heras, Ingo Rehberg, and Kai Huang

Phys. Rev. E 91, 062207 (2015) - Published 10 June, 2015

Density of states in granular media in the presence of damping

David Linton Johnson, Yanqing Hu, and Hernan Makse

Phys. Rev. E 91, 062208 (2015) - Published 11 June, 2015

Relaxation times and rheology in dense athermal suspensions

Peter Olsson

Phys. Rev. E 91, 062209 (2015) - Published 15 June, 2015

Modeling the arrangement of particles in natural swelling-clay porous media using three-dimensional packing of elliptic disks

Eric Ferrage, Fabien Hubert, Emmanuel Tertre, Alfred Delville, Laurent J. Michot, and Pierre Levitz

Phys. Rev. E 91, 062210 (2015) - Published 15 June, 2015

Attenuation of short strongly nonlinear stress pulses in dissipative granular chains

S. Y. Wang and V. F. Nesterenko

Phys. Rev. E 91, 062211 (2015) - Published 17 June, 2015

Deformation-driven diffusion and plastic flow in amorphous granular pillars

Wenbin Li, Jennifer M. Rieser, Andrea J. Liu, Douglas J. Durian, and Ju Li

Phys. Rev. E 91, 062212 (2015) - Published 24 June, 2015

Fluidization of a horizontally driven granular monolayer

Michael Heckel, Achim Sack, Jonathan E. Kollmer, and Thorsten Pöschel

Phys. Rev. E 91, 062213 (2015) - Published 25 June, 2015

Self-organized shocks in the sedimentation of a granular gas

Lidia Almazán, Dan Serero, Clara Salueña, and Thorsten Pöschel

Phys. Rev. E 91, 062214 (2015) - Published 26 June, 2015

Colloids and Complex Fluids

Mean-field microrheology of a very soft colloidal suspension: Inertia induces shear thickening

Vincent Démery

Phys. Rev. E 91, 062301 (2015) - Published 8 June, 2015

Electro-osmotic pumping and ion-concentration polarization based on conical nanopores

Hung-Chun Yeh, Chih-Chang Chang, and Ruey-Jen Yang

Phys. Rev. E 91, 062302 (2015) - Published 9 June, 2015

Self-consistent nonlocal feedback theory for electrocatalytic swimmers with heterogeneous surface chemical kinetics

Amir Nourhani, Vincent H. Crespi, and Paul E. Lammert

Phys. Rev. E 91, 062303 (2015) - Published 10 June, 2015

Glassy dynamics of athermal self-propelled particles: Computer simulations and a nonequilibrium microscopic theory

Grzegorz Szamel, Elijah Flenner, and Ludovic Berthier

Phys. Rev. E 91, 062304 (2015) - Published 11 June, 2015

Role of entropy in the thermodynamic evolution of the time scale of molecular dynamics near the glass transition

K. Grzybowska, A. Grzybowski, S. Pawlus, J. Pionteck, and M. Paluch

Phys. Rev. E 91, 062305 (2015) - Published 15 June, 2015

Experimental observation of local rearrangements in dense quasi-two-dimensional emulsion flow

Dandan Chen, Kenneth W. Desmond, and Eric R. Weeks

Phys. Rev. E 91, 062306 (2015) - Published 22 June, 2015

Films, Interfaces, and Solids

Kinetic roughening and porosity scaling in film growth with subsurface lateral aggregation

F. D. A. Aarão Reis

Phys. Rev. E 91, 062401 (2015) - Published 9 June, 2015

Controlling frontal photopolymerization with optical attenuation and mass diffusion

Matthew G. Hennessy, Alessandra Vitale, Omar K. Matar, and João T. Cabral

Phys. Rev. E 91, 062402 (2015) - Published 11 June, 2015

Ligand structure and mechanical properties of single-nanoparticle-thick membranes

K. Michael Salerno, Dan S. Bolintineanu, J. Matthew D. Lane, and Gary S. Grest

Phys. Rev. E 91, 062403 (2015) - Published 16 June, 2015

Mesoscopic Hamiltonian for the fluctuations of adsorbed Lennard-Jones liquid films

Eva M. Fernández, Enrique Chacón, Luis G. MacDowell, and Pedro Tarazona

Phys. Rev. E 91, 062404 (2015) - Published 19 June, 2015

Curvature generation in nematic surfaces

Cyrus Mostajeran

Phys. Rev. E 91, 062405 (2015) - Published 26 June, 2015

Three-state analytic theory of two-dimensional nuclear magnetic resonance in systems with coupled macro- and micropores

David Linton Johnson and Lawrence M. Schwartz

Phys. Rev. E 91, 062406 (2015) - Published 29 June, 2015

Liquid Crystals

Molecular simulation study of polar order in orthogonal bent-core smectic liquid crystals

Stavros D. Peroukidis, Alexandros G. Vanakaras, and Demetri J. Photinos

Phys. Rev. E 91, 062501 (2015) - Published 4 June, 2015

Macroscopic order in a nematic liquid crystal: Perturbation by spontaneous director fluctuations

Daichi Hamasuna, Rauzah Hashim, Atsuhiro Kasatani, Geoffrey R. Luckhurst, Akihiko Sugimura, Bakir A. Timimi, and Herbert Zimmermann

Phys. Rev. E 91, 062502 (2015) - Published 4 June, 2015

Explicit excluded volume of cylindrically symmetric convex bodies

Marco Piastra and Epifanio G. Virga

Phys. Rev. E 91, 062503 (2015) - Published 8 June, 2015

Polymers

Topological solitons in helical strings

Cristiano Nisoli and Alexander V. Balatsky

Phys. Rev. E 91, 062601 (2015) - Published 25 June, 2015

Curvature elasticity of a grafted polyelectrolyte brush

Zhen Lei, Bing Miao, Shuang Yang, and Er-Qiang Chen

Phys. Rev. E 91, 062602 (2015) - Published 29 June, 2015

Biological Physics

Effects of cellular viscoelasticity in lifetime extraction of single receptor-ligand bonds

V. K. Gupta

Phys. Rev. E 91, 062701 (2015) - Published 5 June, 2015

Colored noise and memory effects on formal spiking neuron models

L. A. da Silva and R. D. Vilela

Phys. Rev. E 91, 062702 (2015) - Published 8 June, 2015

Scaling and optimal synergy: Two principles determining microbial growth in complex media

Francesco Alessandro Massucci, Roger Guimerà, Luís A. Nunes Amaral, and Marta Sales-Pardo

Phys. Rev. E 91, 062703 (2015) - Published 8 June, 2015

Excess white noise to probe transport mechanisms in a membrane channel

María Queralt-Martín, M. Lidón López, and Antonio Alcaraz

Phys. Rev. E 91, 062704 (2015) - Published 8 June, 2015

Polar features in the flagellar propulsion of E. coli bacteria

S. Bianchi, F. Saglimbeni, A. Lepore, and R. Di Leonardo

Phys. Rev. E 91, 062705 (2015) - Published 9 June, 2015

Roles of factorial noise in inducing bimodal gene expression

Peijiang Liu, Zhanjiang Yuan, Lifang Huang, and Tianshou Zhou

Phys. Rev. E 91, 062706 (2015) - Published 9 June, 2015

Synaptic unreliability facilitates information transmission in balanced cortical populations

Leon A. Gatys, Alexander S. Ecker, Tatjana Tchumatchenko, and Matthias Bethge

Phys. Rev. E 91, 062707 (2015) - Published 11 June, 2015

Synchronization and phase redistribution in self-replicating populations of coupled oscillators and excitable elements

Wen Yu and Kevin B. Wood

Phys. Rev. E 91, 062708 (2015) - Published 11 June, 2015

Understanding the similarity in thermophoresis between single- and double-stranded DNA or RNA

Maren Reichl, Mario Herzog, Ferdinand Greiss, Manuel Wolff, and Dieter Braun

Phys. Rev. E 91, 062709 (2015) - Published 11 June, 2015

EDITORS' SUGGESTION

Optimizing information flow in small genetic networks. IV. Spatial coupling

Thomas R. Sokolowski and Gašper Tkačik

Phys. Rev. E 91, 062710 (2015) - Published 15 June, 2015

Modeling oscillations and spiral waves in Dictyostelium populations

Javad Noorbakhsh, David J. Schwab, Allyson E. Sgro, Thomas Gregor, and Pankaj Mehta

Phys. Rev. E 91, 062711 (2015) - Published 15 June, 2015

Theoretical study of electronic damage in single-particle imaging experiments at x-ray free-electron lasers for pulse durations from 0.1 to 10 fs

O. Yu. Gorobtsov, U. Lorenz, N. M. Kabachnik, and I. A. Vartanyants

Phys. Rev. E 91, 062712 (2015) - Published 15 June, 2015

Charged nanoparticle in a nanochannel: Competition between electrostatic and dielectrophoretic forces

Zachery K. Hulings, Dmitriy V. Melnikov, and Maria E. Gracheva

Phys. Rev. E 91, 062713 (2015) - Published 18 June, 2015

Nonlinear irreversible thermodynamics of single-molecule experiments

I. Santamaría-Holek, N. J. López-Alamilla, M. Hidalgo-Soria, and A. Pérez-Madrid

Phys. Rev. E 91, 062714 (2015) - Published 19 June, 2015

Persistent-random-walk approach to anomalous transport of self-propelled particles

Zeinab Sadjadi, M. Reza Shaebani, Heiko Rieger, and Ludger Santen

Phys. Rev. E 91, 062715 (2015) - Published 25 June, 2015

Chromosomal locus tracking with proper accounting of static and dynamic errors

Mikael P. Backlund, Ryan Joyner, and W. E. Moerner

Phys. Rev. E 91, 062716 (2015) - Published 29 June, 2015

Molecular behavior of DNA in a cell-sized compartment coated by lipids

Tsutomu Hamada, Rie Fujimoto, Shunsuke F. Shimobayashi, Masatoshi Ichikawa, and Masahiro Takagi

Phys. Rev. E 91, 062717 (2015) - Published 29 June, 2015

Neural field theory of nonlinear wave-wave and wave-neuron processes

P. A. Robinson and N. Roy

Phys. Rev. E 91, 062719 (2015) - Published 30 June, 2015

Networks and Interdisciplinary Physics

Robust criticality of an Ising model on rewired directed networks

Adam Lipowski, Krzysztof Gontarek, and Dorota Lipowska

Phys. Rev. E 91, 062801 (2015) - Published 2 June, 2015

Evolutionary dynamics for persistent cooperation in structured populations

Yan Li, Xinsheng Liu, Jens Christian Claussen, and Wanlin Guo

Phys. Rev. E 91, 062802 (2015) - Published 5 June, 2015

Limitations in the spectral method for graph partitioning: Detectability threshold and localization of eigenvectors

Tatsuro Kawamoto and Yoshiyuki Kabashima

Phys. Rev. E 91, 062803 (2015) - Published 8 June, 2015

Socioecological regime shifts in the setting of complex social interactions

Hendrik Santoso Sugiarto, Ning Ning Chung, Choy Heng Lai, and Lock Yue Chew

Phys. Rev. E 91, 062804 (2015) - Published 9 June, 2015

Stochastic block model and exploratory analysis in signed networks

Jonathan Q. Jiang

Phys. Rev. E 91, 062805 (2015) - Published 15 June, 2015

Percolation transitions in the survival of interdependent agents on multiplex networks, catastrophic cascades, and solid-on-solid surface growth

Peter Grassberger

Phys. Rev. E 91, 062806 (2015) - Published 15 June, 2015

Topological properties of hierarchical networks

Elena Agliari, Adriano Barra, Andrea Galluzzi, Francesco Guerra, Daniele Tantari, and Flavia Tavani

Phys. Rev. E 91, 062807 (2015) - Published 17 June, 2015

Eigenvalues for the transition matrix of a small-world scale-free network: Explicit expressions and applications

Zhongzhi Zhang, Yuan Lin, and Xiaoye Guo

Phys. Rev. E 91, 062808 (2015) - Published 17 June, 2015

Understanding the heavy-tailed dynamics in human behavior

Gordon J. Ross and Tim Jones

Phys. Rev. E 91, 062809 (2015) - Published 19 June, 2015

Spatial-size scaling of pedestrian groups under growing density conditions

Francesco Zanlungo, Dražen Brščić, and Takayuki Kanda

Phys. Rev. E 91, 062810 (2015) - Published 19 June, 2015

Robustness of power systems under a democratic-fiber-bundle-like model

Osman Yağan

Phys. Rev. E 91, 062811 (2015) - Published 23 June, 2015

Difference equation for tracking perturbations in systems of Boolean nested canalyzing functions

Elena S. Dimitrova, Oleg I. Yordanov, and Mihaela T. Matache

Phys. Rev. E 91, 062812 (2015) - Published 23 June, 2015

FEATURED IN PHYSICS

Cascades in multiplex financial networks with debts of different seniority

Charles D. Brummitt and Teruyoshi Kobayashi

Phys. Rev. E 91, 062813 (2015) - Published 24 June, 2015

A model of a banking network predicts the balance of high- and low-priority debts that ensures financial stability.

Hierarchical link clustering algorithm in networks

Jernej Bodlaj and Vladimir Batagelj

Phys. Rev. E 91, 062814 (2015) - Published 24 June, 2015

EDITORS' SUGGESTION

Safe leads and lead changes in competitive team sports

A. Clauset, M. Kogan, and S. Redner

Phys. Rev. E 91, 062815 (2015) - Published 25 June, 2015

Detrended partial cross-correlation analysis of two nonstationary time series influenced by common external forces

Xi-Yuan Qian, Ya-Min Liu, Zhi-Qiang Jiang, Boris Podobnik, Wei-Xing Zhou, and H. Eugene Stanley

Phys. Rev. E 91, 062816 (2015) - Published 26 June, 2015

Traffic-driven epidemic spreading in correlated networks

Han-Xin Yang, Ming Tang, and Ying-Cheng Lai

Phys. Rev. E 91, 062817 (2015) - Published 29 June, 2015

Optimal information provision for maximizing flow in a forked lattice

Takeaki Imai and Katsuhiro Nishinari

Phys. Rev. E 91, 062818 (2015) - Published 29 June, 2015

Nonlinear Dynamics and Chaos

Spontaneous formation and nonequilibrium dynamics of a soliton-shaped Bose-Einstein condensate in a trap

Oleg L. Berman, Roman Ya. Kezerashvili, German V. Kolmakov, and Leonid M. Pomirchi

Phys. Rev. E 91, 062901 (2015) - Published 2 June, 2015

Dynamics of a differential-difference integrable $(2 + 1)$ -dimensional system

Guo-Fu Yu and Zong-Wei Xu

Phys. Rev. E 91, 062902 (2015) - Published 2 June, 2015

Mechanism for stickiness suppression during extreme events in Hamiltonian systems

Taline Suellen Krüger, Paulo Paneque Galuzio, Thiago de Lima Prado, Ricardo Luiz Viana, José Danilo Szezech, Jr., and Sergio Roberto Lopes

Phys. Rev. E 91, 062903 (2015) - Published 3 June, 2015

Modulational instability regions for coupled Ginzburg-Landau equations with higher order of nonlinearities

Gholam-Ali Zakeri and Emmanuel Yomba

Phys. Rev. E 91, 062904 (2015) - Published 4 June, 2015

Different types of critical behavior in conservatively coupled Hénon maps

Dmitry V. Savin, Alexander P. Kuznetsov, Alexey V. Savin, and Ulrike Feudel

Phys. Rev. E 91, 062905 (2015) - Published 5 June, 2015

Experimental observation of three-frequency quasiperiodic solution in a ring of unidirectionally coupled oscillators

L. Borkowski, P. Perlikowski, T. Kapitaniak, and A. Stefanski

Phys. Rev. E 91, 062906 (2015) - Published 8 June, 2015

Characterizing weak chaos using time series of Lyapunov exponents

R. M. da Silva, C. Manchein, M. W. Beims, and E. G. Altmann

Phys. Rev. E 91, 062907 (2015) - Published 8 June, 2015

Determining the sub-Lyapunov exponent of delay systems from time series

Thomas Jüngling, Miguel C. Soriano, and Ingo Fischer

Phys. Rev. E 91, 062908 (2015) - Published 9 June, 2015

Experimental evidence of explosive synchronization in mercury beating-heart oscillators

Pawan Kumar, Dinesh Kumar Verma, P. Parmananda, and S. Boccaletti

Phys. Rev. E 91, 062909 (2015) - Published 9 June, 2015

Collective dynamics in two populations of noisy oscillators with asymmetric interactions

Bernard Sonnenschein, Thomas K. DM. Peron, Francisco A. Rodrigues, Jürgen Kurths, and Lutz Schimansky-Geier

Phys. Rev. E 91, 062910 (2015) - Published 16 June, 2015

Transformation-cost time-series method for analyzing irregularly sampled data

Ibrahim Ozken, Deniz Eroglu, Thomas Stemler, Norbert Marwan, G. Baris Bagci, and Jürgen Kurths

Phys. Rev. E 91, 062911 (2015) - Published 18 June, 2015

Symbolic computations of nonlinear observability

Ezequiel Bianco-Martinez, Murilo S. Baptista, and Christophe Letellier

Phys. Rev. E 91, 062912 (2015) - Published 18 June, 2015

Heterogeneity induces emergent functional networks for synchronization

Francesco Scafuti, Takaaki Aoki, and Mario di Bernardo

Phys. Rev. E 91, 062913 (2015) - Published 22 June, 2015

Exact invariant measures: How the strength of measure settles the intensity of chaos

Roberto Venegeroles

Phys. Rev. E 91, 062914 (2015) - Published 22 June, 2015

Dynamics of modulated waves in a lossy modified Noguchi electrical transmission line

E. Kengne, A. Lakhssassi, and W. M. Liu

Phys. Rev. E 91, 062915 (2015) - Published 24 June, 2015

Effect of asymmetry parameter on the dynamical states of nonlocally coupled nonlinear oscillators

R. Gopal, V. K. Chandrasekar, D. V. Senthilkumar, A. Venkatesan, and M. Lakshmanan

Phys. Rev. E 91, 062916 (2015) - Published 25 June, 2015

Wavy fronts in a hyperbolic FitzHugh-Nagumo system and the effects of cross diffusion

Evgeny P. Zemskov, Mikhail A. Tsyganov, and Werner Horsthemke

Phys. Rev. E 91, 062917 (2015) - Published 29 June, 2015

The transition between strong and weak chaos in delay systems: Stochastic modeling approach

Thomas Jüngling, Otti D'Huys, and Wolfgang Kinzel

Phys. Rev. E 91, 062918 (2015) - Published 29 June, 2015

Synergistic effect of repulsive inhibition in synchronization of excitatory networks

Igor Belykh, Reimbay Reimbayev, and Kun Zhao

Phys. Rev. E 91, 062919 (2015) - Published 29 June, 2015

Leaky Fermi accelerators

Kushal Shah, Vassili Gelfreich, Vered Rom-Kedar, and Dmitry Turaev

Phys. Rev. E 91, 062920 (2015) - Published 30 June, 2015

Fluid Dynamics

Time-dependent ion transport in heterogeneous permselective systems

Yoav Green and Gilad Yossifon

Phys. Rev. E 91, 063001 (2015) - Published 2 June, 2015

Steady-state deformation behavior of confined composite droplets under shear flow

Stanislav Patlazhan, Sergei Vagner, and Igor Kravchenko

Phys. Rev. E 91, 063002 (2015) - Published 4 June, 2015

Anomalous sea surface structures as an object of statistical topography

V. I. Klyatskin and K. V. Koshel

Phys. Rev. E 91, 063003 (2015) - Published 9 June, 2015

Long-range ordering of turbulent stresses in two-dimensional flow

Yang Liao and Nicholas T. Ouellette

Phys. Rev. E 91, 063004 (2015) - Published 12 June, 2015

Imperfect supercritical bifurcation in a three-dimensional turbulent wake

Olivier Cadot, Antoine Evrard, and Luc Pastur

Phys. Rev. E 91, 063005 (2015) - Published 12 June, 2015

Thermoelectroconvection near charge-selective surfaces

E. A. Demekhin, S. Amiroudine, G. S. Ganchenko, and N. Yu. Khasmatulina

Phys. Rev. E 91, 063006 (2015) - Published 15 June, 2015

Motion of an array of plates in a rarefied gas caused by radiometric force

Satoshi Taguchi and Kazuo Aoki

Phys. Rev. E 91, 063007 (2015) - Published 17 June, 2015

Efficient Brownian dynamics simulation of DNA molecules with hydrodynamic interactions in linear flows

Szu-Pei Fu, Y.-N. Young, and Shidong Jiang

Phys. Rev. E 91, 063008 (2015) - Published 17 June, 2015

Anomalous scaling of the magnetic field in the helical Kazantsev-Kraichnan model

E. Jurčišinová and M. Jurčišin

Phys. Rev. E 91, 063009 (2015) - Published 19 June, 2015

Investigation of an entropic stabilizer for the lattice-Boltzmann method

Keijo K. Mattila, Luiz A. Hegele, Jr., and Paulo C. Philippi

Phys. Rev. E 91, 063010 (2015) - Published 19 June, 2015

Higher-order generalized hydrodynamics: Foundations within a nonequilibrium statistical ensemble formalism

Carlos A. B. Silva, Clóves G. Rodrigues, J. Galvão Ramos, and Roberto Luzzi

Phys. Rev. E 91, 063011 (2015) - Published 22 June, 2015

Korteweg–de Vries solitons on electrified liquid jets

Qiming Wang, Demetrios T. Papageorgiou, and Jean-Marc Vanden-Broeck

Phys. Rev. E 91, 063012 (2015) - Published 25 June, 2015

Dynamics of two-dimensional bubbles

Saúl Piedra, Eduardo Ramos, and J. Ramón Herrera

Phys. Rev. E 91, 063013 (2015) - Published 26 June, 2015

Ergodicity and spectral cascades in point vortex flows on the sphere

David G. Dritschel, Marcello Lucia, and Andrew C. Poje

Phys. Rev. E 91, 063014 (2015) - Published 29 June, 2015

Temperature dependence of single-bubble sonoluminescence threshold in sulfuric acid: An experimental study

Vibodha Bandara, Prabhath Herath, and Asiri Nanayakkara

Phys. Rev. E 91, 063015 (2015) - Published 30 June, 2015

Numerical simulations of internal wave generation by convection in water

Daniel Lecoanet, Michael Le Bars, Keaton J. Burns, Geoffrey M. Vasil, Benjamin P. Brown, Eliot Quataert, and Jeffrey S. Oishi

Phys. Rev. E 91, 063016 (2015) - Published 30 June, 2015

Plasma Physics

Dynamical and transport properties of liquid gallium at high pressures

D. Sheppard, S. Mazevet, F. J. Cherne, R. C. Albers, K. Kadau, T. C. Germann, J. D. Kress, and L. A. Collins

Phys. Rev. E 91, 063101 (2015) - Published 1 June, 2015

Heating efficiency evaluation with mimicking plasma conditions of integrated fast-ignition experiment

Shinsuke Fujioka et al.

Phys. Rev. E 91, 063102 (2015) - Published 5 June, 2015

Charging of large dust grains in flowing plasmas

N. Rizopoulou, A. P. L. Robinson, M. Coppins, and M. Bacharis

Phys. Rev. E 91, 063103 (2015) - Published 10 June, 2015

Out-of-equilibrium conditions in x-ray Thomson scattering experiments

Gérald Faussurier and Christophe Blancard

Phys. Rev. E 91, 063104 (2015) - Published 12 June, 2015

EDITORS' SUGGESTION

Dusty plasma cavities: Probe-induced and natural

B. J. Harris, L. S. Matthews, and T. W. Hyde

Phys. Rev. E 91, 063105 (2015) - Published 22 June, 2015

Ionization rate coefficients in warm dense plasmas

V. Aslanyan and G. J. Tallents

Phys. Rev. E 91, 063106 (2015) - Published 24 June, 2015

Modified Enskog kinetic theory for strongly coupled plasmas

Scott D. Baalrud and Jérôme Daligault

Phys. Rev. E 91, 063107 (2015) - Published 24 June, 2015

Wave modes in shear-deformed two-dimensional plasma crystals

A. V. Ivlev, T. B. Röcker, L. Couëdel, V. Nosenko, and C.-R. Du

Phys. Rev. E 91, 063108 (2015) - Published 25 June, 2015

Ion-ion dynamic structure factor of warm dense mixtures

N. M. Gill, R. A. Heinonen, C. E. Starrett, and D. Saumon

Phys. Rev. E 91, 063109 (2015) - Published 25 June, 2015

Analytic structure of a drag-driven confined dust vortex flow in plasma

Modhuchandra Laishram, Devendra Sharma, and Predhiman K. Kaw

Phys. Rev. E 91, 063110 (2015) - Published 29 June, 2015

Classical Physics

Nonparaxial rogue waves in optical Kerr media

D. D. Estelle Temgoua and T. C. Kofane

Phys. Rev. E 91, 063201 (2015) - Published 3 June, 2015

Radiation of charged-particle bunches passing perpendicularly by the edge of a semi-infinite planar wire structure

Andrey V. Tyukhtin, Viktor V. Vorobev, and Sergey N. Galyamin

Phys. Rev. E 91, 063202 (2015) - Published 15 June, 2015

EDITORS' SUGGESTION

Cylindrical confinement of semiflexible polymers

Pablo Vázquez-Montejo, Zachary McDargh, Markus Deserno, and Jemal Guven

Phys. Rev. E 91, 063203 (2015) - Published 15 June, 2015

The authors study shapes and associated forces for a closed semiflexible polymer bound to the inside or the outside of a cylinder.

Unsteady evolution of localized unidirectional deep-water wave groups

Will Cousins and Themistoklis P. Sapsis

Phys. Rev. E 91, 063204 (2015) - Published 15 June, 2015

Non-Bragg-gap solitons in one-dimensional Kerr-metamaterial Fibonacci heterostructures

E. Reyes-Gómez, S. B. Cavalcanti, and L. E. Oliveira

Phys. Rev. E 91, 063205 (2015) - Published 23 June, 2015

Computational Physics

Mesoscale modeling of colloidal suspensions with adsorbing solutes

Rei Tatsumi, Osamu Koike, and Yukio Yamaguchi

Phys. Rev. E 91, 063301 (2015) - Published 3 June, 2015

Key role of elastic vortices in the initiation of intersonic shear cracks

Sergey G. Psakhie, Evgeny V. Shilko, Mikhail V. Popov, and Valentin L. Popov

Phys. Rev. E 91, 063302 (2015) - Published 4 June, 2015

Parallelized traveling cluster approximation to study numerically spin-fermion models on large lattices

Anamitra Mukherjee, Niravkumar D. Patel, Chris Bishop, and Elbio Dagotto

Phys. Rev. E 91, 063303 (2015) - Published 8 June, 2015

Numerical solver for first-principles transport calculation based on real-space finite-difference method

Shigeru Iwase, Takeo Hoshi, and Tomoya Ono

Phys. Rev. E 91, 063305 (2015) - Published 12 June, 2015

Improved scaling of time-evolving block-decimation algorithm through reduced-rank randomized singular value decomposition

D. Tamascelli, R. Rosenbach, and M. B. Plenio

Phys. Rev. E 91, 063306 (2015) - Published 15 June, 2015

ERRATA

Publisher's Note: Work done and irreversible entropy production in a suddenly quenched quantum spin chain with asymmetrical excitation spectra [Phys. Rev. E 91, 032137 (2015)]

Ming Zhong and Peiqing Tong

Phys. Rev. E 91, 069901 (2015) - Published 12 June, 2015

Publisher's Note: Incorporating pushing in exclusion-process models of cell migration [Phys. Rev. E 91, 052711 (2015)]

Christian A. Yates, Andrew Parker, and Ruth E. Baker

Phys. Rev. E 91, 069902 (2015) - Published 12 June, 2015

Erratum: Existence and damping of dust acoustic solitary waves in a bounded geometry [Phys. Rev. E 87, 063101 (2013)]

Xue Yang, Cong-Bo Liu, Yang Yang, Yu-Ren Shi, Yan-Xia Xu, Dong-Ning Gao, Wen-Shan Duan, and Lei Yang

Phys. Rev. E 91, 069903 (2015) - Published 29 June, 2015