Volume 100, Issue 2

August 2019

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EDITORIALS AND ANNOUNCEMENTS

Announcement: In Memory of Bruno Eckhardt

Michael Thoennessen and Eli Ben-Naim

Phys. Rev. E 100, 020001 (2019) - Published 27 August, 2019

HIGHLIGHTED ARTICLES

EDITORS' SUGGESTION

Adsorption of interacting self-avoiding trails in two dimensions

N. T. Rodrigues, T. Prellberg, and A. L. Owczarek

Phys. Rev. E 100, 022121 (2019) - Published 15 August, 2019

Lattice trails in two dimensions are a greatly simplified system that can give insight into the complex phase diagram of polymer adsorption on a surface. The authors simulate three different adsorption scenarios in this system, and study the resulting phases and phase boundaries as well as the critical exponents.

EDITORS' SUGGESTION

Selectivity of the KcsA potassium channel: Analysis and computation

Zilong Song, Xiulei Cao, Tzyy-Leng Horng, and Huaxiong Huang

Phys. Rev. E 100, 022406 (2019) - Published 7 August, 2019

This article reports an analytical and numerical study of the selectivity of potassium channels in cells. The authors consider both divalent and monovalent ions and take into account effects of ion size and solvation energy. Their results for selectivity ratios and current-voltage curves agree well with experimental observations.

EDITORS' SUGGESTION

Design of conditions for self-replication

Sumantra Sarkar and Jeremy L. England

Phys. Rev. E 100, 022414 (2019) - Published 26 August, 2019

The kinetics of a toy chemical model can give rise to simple example of a self-replicating system. The analysis in this work could inspire the creation of micro- or nanodevices able to produce copies of themselves by conversion of materials in their environment.

EDITORS' SUGGESTION

Clustering and anisotropic correlated percolation in polar flocks

Nikos Kyriakopoulos, Hugues Chaté, and Francesco Ginelli

Phys. Rev. E 100, 022606 (2019) - Published 28 August, 2019

Models of collective motion can show a transition to a phase with orientational order, as well as clustering behavior. This work shows that these two phenomena are independent, and that, in the phase with orientational order, the clustering takes the form of an anisotropic percolation transition.

EDITORS' SUGGESTION

Molecular simulation of thin liquid films: Thermal fluctuations and instability

Yixin Zhang, James E. Sprittles, and Duncan A. Lockerby

Phys. Rev. E 100, 023108 (2019) - Published 16 August, 2019

This work combines molecular dynamics simulations with analytical techniques to study the effect of thermal fluctuations on the stability of thin liquid films. Results from a stochastic thin-film equation agree well with those from the simulations, but disagree with a deterministic equation. The authors conclude that thermal fluctuations play an important role in the dynamics of thin films at the nanoscale.

EDITORS' SUGGESTION

Haines jumps: Pore scale mechanisms

Zhonghao Sun and J. Carlos Santamarina

Phys. Rev. E 100, 023115 (2019) - Published 27 August, 2019

Sudden changes in pressure and fluid distribution are often observed in porous systems, and this work proposes and tests a physical model to explain this phenomenon. The analysis enables the authors to predict effects of various factors on the occurrence of such jumps, which are termed Haines instabilities.

RAPID COMMUNICATIONS

Statistical Physics

RAPID COMMUNICATION

From cellular automata to growth dynamics: The Kardar-Parisi-Zhang universality class

Waldenor P. Gomes, André L. A. Penna, and Fernando A. Oliveira

Phys. Rev. E 100, 020101(R) (2019) - Published 9 August, 2019

RAPID COMMUNICATION

Fading of collective attention shapes the evolution of linguistic variants

Diego E. Shalom, Mariano Sigman, Gabriel Mindlin, and Marcos A. Trevisan

Phys. Rev. E 100, 020102(R) (2019) - Published 14 August, 2019

RAPID COMMUNICATION

Exact large deviation statistics and trajectory phase transition of a deterministic boundary driven cellular automaton

Berislav Buča, Juan P. Garrahan, Tomaž Prosen, and Matthieu Vanicat

Phys. Rev. E 100, 020103(R) (2019) - Published 19 August, 2019

RAPID COMMUNICATION

Gumbel central limit theorem for max-min and min-max

Iddo Eliazar, Ralf Metzler, and Shlomi Reuveni

Phys. Rev. E 100, 020104(R) (2019) - Published 21 August, 2019

RAPID COMMUNICATION

Driving driven lattice gases to identify their universality classes

Yahui Li, Zhongda Zeng, and Fan Zhong

Phys. Rev. E 100, 020105(R) (2019) - Published 27 August, 2019

Nonlinear Dynamics and Chaos

RAPID COMMUNICATION

Spatiotemporal correlation uncovers characteristic lengths in cardiac tissue

Alessandro Loppini, Alessio Gizzi, Christian Cherubini, Elizabeth M. Cherry, Flavio H. Fenton, and Simonetta Filippi

Phys. Rev. E 100, 020201(R) (2019) - Published 16 August, 2019

Networks and Complex Systems

RAPID COMMUNICATION

Enhancing the robustness of a multiplex network leads to multiple discontinuous percolation transitions

Ivan Kryven and Ginestra Bianconi

Phys. Rev. E 100, 020301(R) (2019) - Published 15 August, 2019

Biological Physics

RAPID COMMUNICATION

Interplay between surface and bending energy helps membrane protrusion formation

Raj Kumar Sadhu and Sakuntala Chatterjee

Phys. Rev. E 100, 020401(R) (2019) - Published 1 August, 2019

Colloids, Complex Fluids, and Active Matter

RAPID COMMUNICATION

Spectral shape simplicity of viscous materials

Catalin Gainaru

Phys. Rev. E 100, 020601(R) (2019) - Published 12 August, 2019

RAPID COMMUNICATION

Morphology and kinetics of random sequential adsorption of superballs: From hexapods to cubes

Pooria Yousefi, Hessam Malmir, and Muhammad Sahimi

Phys. Rev. E 100, 020602(R) (2019) - Published 23 August, 2019

RAPID COMMUNICATION

Correlations between short- and long-time relaxation in colloidal supercooled liquids and glasses

Chandan K. Mishra, Xiaoguang Ma, Piotr Habdas, Kevin B. Aptowicz, and A. G. Yodh

Phys. Rev. E 100, 020603(R) (2019) - Published 28 August, 2019

Liquid Crystals

RAPID COMMUNICATION

Dual-field-induced biaxial nematic ordering of two-dimensional nanoparticles and enhancement of interparticle interactions

Seung-Ho Hong, Tian-Zi Shen, and Jang-Kun Song

Phys. Rev. E 100, 020701(R) (2019) - Published 12 August, 2019

RAPID COMMUNICATION

Bulk-boundary correspondence in soft matter

Mehmet Ramazanoglu, Şener Özönder, and Rumeysa Salcı

Phys. Rev. E 100, 020702(R) (2019) - Published 26 August, 2019

Solid Mechanics

RAPID COMMUNICATION

Excess floppy modes and multibranched mechanisms in metamaterials with symmetries

Luuk A. Lubbers and Martin van Hecke

Phys. Rev. E 100, 021001(R) (2019) - Published 21 August, 2019

Fluid Dynamics

RAPID COMMUNICATION

Computing exact coherent states in channels starting from the laminar profile: A resolvent-based approach

Kevin Rosenberg and Beverley J. McKeon

Phys. Rev. E 100, 021101(R) (2019) - Published 28 August, 2019

Plasma Physics

RAPID COMMUNICATION

Rayleigh-Taylor instability experiments on the LULI2000 laser in scaled conditions for young supernova remnants

G. Rigon, A. Casner, B. Albertazzi, Th. Michel, P. Mabey, E. Falize, J. Ballet, L. Van Box Som, S. Pikuz, Y. Sakawa, T. Sano, A. Faenov, T. Pikuz, N. Ozaki, Y. Kuramitsu, M. P. Valdivia, P. Tzeferacos, D. Lamb, and M. Koenig

Phys. Rev. E 100, 021201(R) (2019) - Published 19 August, 2019

ARTICLES

Statistical Physics

Dynamical phase behavior of the single- and multi-lane asymmetric simple exclusion process via matrix product states

Phillip Helms, Ushnish Ray, and Garnet Kin-Lic Chan

Phys. Rev. E 100, 022101 (2019) - Published 2 August, 2019

Three-dimensional observation of Brownian particles under steady shear flow by stereo microscopy

Yoshinori Takikawa, Takahiro Nunokawa, Yuji Sasaki, Makoto Iwata, and Hiroshi Orihara

Phys. Rev. E 100, 022102 (2019) - Published 2 August, 2019

Exact analysis of phase transitions in mean-field Potts models

Paolo Lorenzoni and Antonio Moro

Phys. Rev. E 100, 022103 (2019) - Published 5 August, 2019

Quantum Ising model in a period-2 modulated transverse field

Adalberto D. Varizi and Raphael C. Drumond

Phys. Rev. E 100, 022104 (2019) - Published 5 August, 2019

Relaxation to Gaussian generalized Gibbs ensembles in quadratic bosonic systems in the thermodynamic limit

Takaaki Monnai, Shohei Morodome, and Kazuya Yuasa

Phys. Rev. E 100, 022105 (2019) - Published 5 August, 2019

Biologically motivated three-species exclusion model: Effects of leaky scanning and overlapping genes on initiation of protein synthesis

Bhavya Mishra and Debashish Chowdhury

Phys. Rev. E 100, 022106 (2019) - Published 6 August, 2019

Hyperuniformity on spherical surfaces

Ariel G. Meyra, Guillermo J. Zarragoicoechea, Alberto. L. Maltz, Enrique Lomba, and Salvatore Torquato

Phys. Rev. E 100, 022107 (2019) - Published 6 August, 2019

Tensor renormalization group study of hard-disk models on a triangular lattice

S. S. Akimenko, V. A. Gorbunov, A. V. Myshlyavtsev, and P. V. Stishenko

Phys. Rev. E 100, 022108 (2019) - Published 7 August, 2019

Order-disorder transition in a two-dimensional associating lattice gas

A. P. Furlan, Tiago J. Oliveira, Jürgen F. Stilck, and Ronald Dickman

Phys. Rev. E 100, 022109 (2019) - Published 8 August, 2019

Effect of stochastic processes on structure formation in nanocrystalline materials under severe plastic deformation

Alexei Khomenko, Daria Troshchenko, and Leonid Metlov

Phys. Rev. E 100, 022110 (2019) - Published 7 August, 2019

Thermalization with detailed-balanced two-site Lindblad dissipators

Mikel Palmero, Xiansong Xu, Chu Guo, and Dario Poletti

Phys. Rev. E 100, 022111 (2019) - Published 9 August, 2019

Diffusion in binary mixtures: An analysis of the dependence on the thermodynamic factor

M. Di Pietro Martínez and M. Hoyuelos

Phys. Rev. E 100, 022112 (2019) - Published 12 August, 2019

Directed negative-weight percolation

C. Norrenbrock, M. M. Mkrtchian, and A. K. Hartmann

Phys. Rev. E 100, 022113 (2019) - Published 12 August, 2019

Transport and escape in a deformable channel driven by fractional Gaussian noise

Ruoxing Mei, Yong Xu, and Jürgen Kurths

Phys. Rev. E 100, 022114 (2019) - Published 12 August, 2019

Symmetry of deterministic ratchets

V. M. Rozenbaum, I. V. Shapochkina, Y. Teranishi, and L. I. Trakhtenberg

Phys. Rev. E 100, 022115 (2019) - Published 13 August, 2019

Nonequilibrium phase transitions and pattern formation as consequences of second-order thermodynamic induction

S. N. Patitsas

Phys. Rev. E 100, 022116 (2019) - Published 14 August, 2019

Thermal equilibration in a one-dimensional damped harmonic crystal

S. N. Gavrilov and A. M. Krivtsov

Phys. Rev. E 100, 022117 (2019) - Published 14 August, 2019

Nonlinear fluctuating hydrodynamics with many conserved fields: The case of a three-dimensional anharmonic chain

R. Barreto, M. F. Carusela, and A. G. Monastra

Phys. Rev. E 100, 022118 (2019) - Published 15 August, 2019

Persistent random motion with maximally correlated fluctuations

Adam Svenkeson and Bruce J. West

Phys. Rev. E 100, 022119 (2019) - Published 15 August, 2019

Interplay of adsorption and surface mobility in tracer diffusion in porous media

Carlos Olivares and F. D. A. Aarão Reis

Phys. Rev. E 100, 022120 (2019) - Published 15 August, 2019

EDITORS' SUGGESTION

Adsorption of interacting self-avoiding trails in two dimensions

N. T. Rodrigues, T. Prellberg, and A. L. Owczarek

Phys. Rev. E 100, 022121 (2019) - Published 15 August, 2019

Three-dimensional ferromagnetic ${CP}^{N - 1}$ models

Andrea Pelissetto and Ettore Vicari

Phys. Rev. E 100, 022122 (2019) - Published 19 August, 2019

Area covered by disks in small-bounded continuum percolating systems: An application to the string percolation model

J. E. Ramírez and C. Pajares

Phys. Rev. E 100, 022123 (2019) - Published 19 August, 2019

Stochastic basins of attraction and generalized committor functions

Michael Lindner and Frank Hellmann

Phys. Rev. E 100, 022124 (2019) - Published 19 August, 2019

Percolation of sites not removed by a random walker in $d$ dimensions

Yacov Kantor and Mehran Kardar

Phys. Rev. E 100, 022125 (2019) - Published 20 August, 2019

All binary number-conserving cellular automata based on adjacent cells are intrinsically one-dimensional

Barbara Wolnik and Bernard De Baets

Phys. Rev. E 100, 022126 (2019) - Published 20 August, 2019

Operational approach to quantum stochastic thermodynamics

Philipp Strasberg

Phys. Rev. E 100, 022127 (2019) - Published 21 August, 2019

Phase-field crystal for an antiferromagnet with elastic interactions

Niloufar Faghihi, Simiso Mkhonta, Ken Elder, and Martin Grant

Phys. Rev. E 100, 022128 (2019) - Published 21 August, 2019

Poisson-process limit laws yield Gumbel max-min and min-max

Iddo Eliazar, Ralf Metzler, and Shlomi Reuveni

Phys. Rev. E 100, 022129 (2019) - Published 21 August, 2019

Noise sharing and Mexican-hat coupling in a stochastic neural field

Peter H. Baxendale, Priscilla E. Greenwood, and Lawrence M. Ward

Phys. Rev. E 100, 022130 (2019) - Published 21 August, 2019

Structure of chaotic eigenstates and their entanglement entropy

Chaitanya Murthy and Mark Srednicki

Phys. Rev. E 100, 022131 (2019) - Published 22 August, 2019

Steady-state and transient analysis of the Peskin-Odell-Oster Brownian ratchet model in the limit of large but finite diffusion

Gregory Kozyreff and Jean-Paul Ryckaert

Phys. Rev. E 100, 022132 (2019) - Published 22 August, 2019

Avalanche dynamics in hierarchical fiber bundles

Soumyajyoti Biswas and Michael Zaiser

Phys. Rev. E 100, 022133 (2019) - Published 23 August, 2019

Optimal estimation of drift and diffusion coefficients in the presence of static localization error

J. Devlin, D. Husmeier, and J. A. Mackenzie

Phys. Rev. E 100, 022134 (2019) - Published 23 August, 2019

Stochastic thermodynamics with arbitrary interventions

Philipp Strasberg and Andreas Winter

Phys. Rev. E 100, 022135 (2019) - Published 23 August, 2019

Jamming and percolation of $k^{3}$ -mers on simple cubic lattices

A. C. Buchini Labayen, P. M. Centres, P. M. Pasinetti, and A. J. Ramirez-Pastor

Phys. Rev. E 100, 022136 (2019) - Published 23 August, 2019

Free-energy model of phase inversion dynamics in binary phase separation

Yoshihide Kubo, Shinpei Tanaka, and Yoshihiro Yamazaki

Phys. Rev. E 100, 022137 (2019) - Published 26 August, 2019

Determination of the critical manifold tangent space and curvature with Monte Carlo renormalization group

Yantao Wu and Roberto Car

Phys. Rev. E 100, 022138 (2019) - Published 26 August, 2019

Characterization of the non-Arrhenius behavior of supercooled liquids by modeling nonadditive stochastic systems

A. C. P. Rosa Junior, C. Cruz, W. S. Santana, and M. A. Moret

Phys. Rev. E 100, 022139 (2019) - Published 27 August, 2019

Deriving phase field crystal theory from dynamical density functional theory: Consequences of the approximations

Andrew J. Archer, Daniel J. Ratliff, Alastair M. Rucklidge, and Priya Subramanian

Phys. Rev. E 100, 022140 (2019) - Published 28 August, 2019

General linear thermodynamics for periodically driven systems with multiple reservoirs

Karel Proesmans and Carlos E. Fiore

Phys. Rev. E 100, 022141 (2019) - Published 28 August, 2019

Level repulsion and dynamics in the finite one-dimensional Anderson model

E. Jonathan Torres-Herrera, J. A. Méndez-Bermúdez, and Lea F. Santos

Phys. Rev. E 100, 022142 (2019) - Published 29 August, 2019

Evidence of Kosterlitz-Thouless phase transitions in the Ising model with dipolar interactions

M. A. Bab and G. P. Saracco

Phys. Rev. E 100, 022143 (2019) - Published 29 August, 2019

Random walks on intersecting geometries

Reza Sepehrinia, Abbas Ali Saberi, and Hor Dashti-Naserabadi

Phys. Rev. E 100, 022144 (2019) - Published 29 August, 2019

One-dimensional discrete aggregation-fragmentation model

N. Zh. Bunzarova, N. C. Pesheva, and J. G. Brankov

Phys. Rev. E 100, 022145 (2019) - Published 30 August, 2019

Nonlinear Dynamics and Chaos

Variational approach to study soliton dynamics in a passive fiber loop resonator with coherently driven phase-modulated external field

Maitrayee Saha, Samudra Roy, and Shailendra K. Varshney

Phys. Rev. E 100, 022201 (2019) - Published 1 August, 2019

Transient diffusion and two-regime localization of discrete breatherlike excitations in nonlinear Schrödinger lattice with disorder

Zhi-Yuan Sun and Xin Yu

Phys. Rev. E 100, 022202 (2019) - Published 2 August, 2019

Detecting nonlinear stochastic systems using two independent hypothesis tests

Yoshito Hirata and Masanori Shiro

Phys. Rev. E 100, 022203 (2019) - Published 5 August, 2019

Finding normally hyperbolic invariant manifolds in two and three degrees of freedom with Hénon-Heiles-type potential

Shibabrat Naik and Stephen Wiggins

Phys. Rev. E 100, 022204 (2019) - Published 5 August, 2019

Connection of the nearest-neighbor spacing distribution and the local box-counting dimension for discrete sets

Pedro Carpena and Ana V. Coronado

Phys. Rev. E 100, 022205 (2019) - Published 8 August, 2019

Pterobreathers in a model for a layered crystal with realistic potentials: Exact moving breathers in a moving frame

Juan F. R. Archilla, Yusuke Doi, and Masayuki Kimura

Phys. Rev. E 100, 022206 (2019) - Published 12 August, 2019

Effect of system energy on quantum signatures of chaos in the two-photon Dicke model

Shangyun Wang, Songbai Chen, and Jiliang Jing

Phys. Rev. E 100, 022207 (2019) - Published 12 August, 2019

Firing rate distributions in spiking networks with heterogeneous connectivity

Marina Vegué and Alex Roxin

Phys. Rev. E 100, 022208 (2019) - Published 12 August, 2019

Oscillation death in coupled counter-rotating identical nonlinear oscillators

Jung-Wan Ryu, Woo-Sik Son, and Dong-Uk Hwang

Phys. Rev. E 100, 022209 (2019) - Published 13 August, 2019

Speed-of-light pulses in a massless nonlinear Dirac equation

Jesús Cuevas-Maraver, P. G. Kevrekidis, Franz G. Mertens, and Avadh Saxena

Phys. Rev. E 100, 022210 (2019) - Published 13 August, 2019

Final-state sensitivity characterized by phase transition in singularity spectra of intermingled basins

Hiromi G. Ishikawa and Takehiko Horita

Phys. Rev. E 100, 022211 (2019) - Published 14 August, 2019

Nondegenerate bound-state solitons in multicomponent Bose-Einstein condensates

Yan-Hong Qin, Li-Chen Zhao, and Liming Ling

Phys. Rev. E 100, 022212 (2019) - Published 15 August, 2019

Correspondence between phase oscillator network and classical $X Y$ model with the same random and frustrated interactions

Tomoyuki Kimoto and Tatsuya Uezu

Phys. Rev. E 100, 022213 (2019) - Published 16 August, 2019

Wave-shape profiles in a coupled inductor-capacitor network with nonlinear dispersion

Guy Roger Deffo, Serge Bruno Yamgoué, and François Beceau Pelap

Phys. Rev. E 100, 022214 (2019) - Published 19 August, 2019

Effective dispersion in the focusing nonlinear Schrödinger equation

Katelyn Plaisier Leisman, Douglas Zhou, J. W. Banks, Gregor Kovačič, and David Cai

Phys. Rev. E 100, 022215 (2019) - Published 19 August, 2019

Balancing long-range interactions and quantum pressure: Solitons in the Hamiltonian mean-field model

Ryan Plestid and D. H. J. O'Dell

Phys. Rev. E 100, 022216 (2019) - Published 19 August, 2019

Lyapunov spectra and collective modes of chimera states in globally coupled Stuart-Landau oscillators

Kevin Höhlein, Felix P. Kemeth, and Katharina Krischer

Phys. Rev. E 100, 022217 (2019) - Published 20 August, 2019

Using wavelet analysis to investigate synchronization

Shraddha Gupta, Sadhitro De, M. S. Janaki, and A. N. Sekar Iyengar

Phys. Rev. E 100, 022218 (2019) - Published 21 August, 2019

Data-driven discovery of partial differential equation models with latent variables

Patrick A. K. Reinbold and Roman O. Grigoriev

Phys. Rev. E 100, 022219 (2019) - Published 21 August, 2019

Discovering time-varying aerodynamics of a prototype bridge by sparse identification of nonlinear dynamical systems

Shanwu Li, Eurika Kaiser, Shujin Laima, Hui Li, Steven L. Brunton, and J. Nathan Kutz

Phys. Rev. E 100, 022220 (2019) - Published 21 August, 2019

$PT$ -symmetric direct electrical transmission lines: Localization behavior

Fernando R. Humire and Edmundo Lazo

Phys. Rev. E 100, 022221 (2019) - Published 26 August, 2019

Reconnection of multiple scroll rings in a three-dimensional reaction-diffusion system

Dhriti Mahanta and Sumana Dutta

Phys. Rev. E 100, 022222 (2019) - Published 27 August, 2019

Wave-number selection in pattern-forming systems

S. Saxena and J. M. Kosterlitz

Phys. Rev. E 100, 022223 (2019) - Published 28 August, 2019

Chimera state in complex networks of bistable Hodgkin-Huxley neurons

A. V. Andreev, N. S. Frolov, A. N. Pisarchik, and A. E. Hramov

Phys. Rev. E 100, 022224 (2019) - Published 30 August, 2019

Networks and Complex Systems

Map equation with metadata: Varying the role of attributes in community detection

Scott Emmons and Peter J. Mucha

Phys. Rev. E 100, 022301 (2019) - Published 2 August, 2019

Intervention threshold for epidemic control in susceptible-infected-recovered metapopulation models

Akari Matsuki and Gouhei Tanaka

Phys. Rev. E 100, 022302 (2019) - Published 5 August, 2019

Phase transition in a network model of social balance with Glauber dynamics

Rana Shojaei, Pouya Manshour, and Afshin Montakhab

Phys. Rev. E 100, 022303 (2019) - Published 5 August, 2019

Consensus and diversity in multistate noisy voter models

Francisco Herrerías-Azcué and Tobias Galla

Phys. Rev. E 100, 022304 (2019) - Published 6 August, 2019

Social reinforcement with weighted interactions

Théo Konc and Ivan Savin

Phys. Rev. E 100, 022305 (2019) - Published 9 August, 2019

Renormalization group for link percolation on planar hyperbolic manifolds

Ivan Kryven, Robert M. Ziff, and Ginestra Bianconi

Phys. Rev. E 100, 022306 (2019) - Published 13 August, 2019

Copula-based algorithm for generating bursty time series

Hang-Hyun Jo, Byoung-Hwa Lee, Takayuki Hiraoka, and Woo-Sung Jung

Phys. Rev. E 100, 022307 (2019) - Published 14 August, 2019

Phase transition creates the geometry of the continuum from discrete space

Robert S. Farr and Thomas M. A. Fink

Phys. Rev. E 100, 022308 (2019) - Published 16 August, 2019

Dynamic behavior analysis of an internet flow interaction model under cascading failures

Xiaoyu Wu, Rentao Gu, Yuefeng Ji, and H. Eugene Stanley

Phys. Rev. E 100, 022309 (2019) - Published 16 August, 2019

Walking on stairs: Experiment and model

Gerta Köster, Daniel Lehmberg, and Angelika Kneidl

Phys. Rev. E 100, 022310 (2019) - Published 19 August, 2019

Relational flexibility of network elements based on inconsistent community detection

Heetae Kim (김희태) and Sang Hoon Lee (이상훈)

Phys. Rev. E 100, 022311 (2019) - Published 19 August, 2019

Aging in transport processes on networks with stochastic cumulative damage

A. P. Riascos, J. Wang-Michelitsch, and T. M. Michelitsch

Phys. Rev. E 100, 022312 (2019) - Published 20 August, 2019

Control of coherence resonance by self-induced stochastic resonance in a multiplex neural network

Marius E. Yamakou and Jürgen Jost

Phys. Rev. E 100, 022313 (2019) - Published 20 August, 2019

Persistent homology of complex networks for dynamic state detection

Audun Myers, Elizabeth Munch, and Firas A. Khasawneh

Phys. Rev. E 100, 022314 (2019) - Published 21 August, 2019

Micro-, meso-, macroscales: The effect of triangles on communities in networks

Sophie Wharrie, Lamiae Azizi, and Eduardo G. Altmann

Phys. Rev. E 100, 022315 (2019) - Published 21 August, 2019

Optimal interlayer structure for promoting spreading of the susceptible-infected-susceptible model in two-layer networks

Liming Pan, Wei Wang, Shimin Cai, and Tao Zhou

Phys. Rev. E 100, 022316 (2019) - Published 23 August, 2019

Explicit non-Markovian susceptible-infected-susceptible mean-field epidemic threshold for Weibull and Gamma infections but Poisson curings

P. Van Mieghem and Qiang Liu

Phys. Rev. E 100, 022317 (2019) - Published 26 August, 2019

Controllability limit of edge dynamics in complex networks

Shao-Peng Pang, Wen-Xu Wang, and Fei Hao

Phys. Rev. E 100, 022318 (2019) - Published 27 August, 2019

Multiplicative measurement noise can facilitate consensus of multiagent networks

Haifeng Dai, Yongzheng Sun, Wang Li, and Donghua Zhao

Phys. Rev. E 100, 022319 (2019) - Published 30 August, 2019

Spatial point pattern and urban morphology: Perspectives from entropy, complexity, and networks

Hoai Nguyen Huynh

Phys. Rev. E 100, 022320 (2019) - Published 30 August, 2019

Biological Physics

Accuracy of position determination in ${Ca}^{2 +}$ signaling

Vaibhav H. Wasnik, Peter Lipp, and Karsten Kruse

Phys. Rev. E 100, 022401 (2019) - Published 1 August, 2019

Twist-bend coupling, twist waves, and the shape of DNA loops

S. K. Nomidis, M. Caraglio, M. Laleman, K. Phillips, E. Skoruppa, and E. Carlon

Phys. Rev. E 100, 022402 (2019) - Published 5 August, 2019

Solution of the Crow-Kimura model with a periodically changing (two-season) fitness function

David B. Saakian and Kang Hao Cheong

Phys. Rev. E 100, 022403 (2019) - Published 5 August, 2019

Estimation of mutual information for real-valued data with error bars and controlled bias

Caroline M. Holmes and Ilya Nemenman

Phys. Rev. E 100, 022404 (2019) - Published 6 August, 2019

Cell-to-cell variability in organelle abundance reveals mechanisms of organelle biogenesis

Sandeep Choubey, Dipjyoti Das, and Saptarshi Majumdar

Phys. Rev. E 100, 022405 (2019) - Published 6 August, 2019

EDITORS' SUGGESTION

Selectivity of the KcsA potassium channel: Analysis and computation

Zilong Song, Xiulei Cao, Tzyy-Leng Horng, and Huaxiong Huang

Phys. Rev. E 100, 022406 (2019) - Published 7 August, 2019

Unified dynamics of interictal events and absence seizures

F. Deeba, P. Sanz-Leon, and P. A. Robinson

Phys. Rev. E 100, 022407 (2019) - Published 12 August, 2019

Limited processivity of single motors improves overall transport flux of self-assembled motor-cargo complexes

Keshav B. Patel, Shengtan Mao, M. Gregory Forest, Samuel K. Lai, and Jay M. Newby

Phys. Rev. E 100, 022408 (2019) - Published 13 August, 2019

Translational thresholds in a core circadian clock model

Paula S. Nieto and C. A. Condat

Phys. Rev. E 100, 022409 (2019) - Published 15 August, 2019

Simulation of electric fields generated from microtubule vibrations

Kyle A. Thackston, Dimitri D. Deheyn, and Daniel F. Sievenpiper

Phys. Rev. E 100, 022410 (2019) - Published 15 August, 2019

Evolutionary game dynamics of combining the imitation and aspiration-driven update rules

Xianjia Wang, Cuiling Gu, Jinhua Zhao, and Ji Quan

Phys. Rev. E 100, 022411 (2019) - Published 20 August, 2019

Molecular dynamics simulation of the binding process of ligands to the add adenine riboswitch aptamer

Lei Bao, Jun Wang, and Yi Xiao

Phys. Rev. E 100, 022412 (2019) - Published 21 August, 2019

Active morphogenesis of epithelial monolayers

Richard G. Morris and Madan Rao

Phys. Rev. E 100, 022413 (2019) - Published 21 August, 2019

EDITORS' SUGGESTION

Design of conditions for self-replication

Sumantra Sarkar and Jeremy L. England

Phys. Rev. E 100, 022414 (2019) - Published 26 August, 2019

Critical slowing down in biochemical networks with feedback

Tommy A. Byrd, Amir Erez, Robert M. Vogel, Curtis Peterson, Michael Vennettilli, Grégoire Altan-Bonnet, and Andrew Mugler

Phys. Rev. E 100, 022415 (2019) - Published 26 August, 2019

Membrane stretching elasticity and thermal shape fluctuations of nearly spherical lipid vesicles

Isak Bivas and Nicholay S. Tonchev

Phys. Rev. E 100, 022416 (2019) - Published 28 August, 2019

Acid-mediated tumor invasion as a function of nutrient source location

Silvia A. Menchón

Phys. Rev. E 100, 022417 (2019) - Published 29 August, 2019

Power spectrum of resting-state blood-oxygen-level-dependent signal

J. C. Pang and P. A. Robinson

Phys. Rev. E 100, 022418 (2019) - Published 29 August, 2019

Polymers

Relaxation dynamics of semiflexible treelike small-world polymer networks

Edieliton S. Oliveira, Ana Célia A. M. Galiceanu, Aurel Jurjiu, and Mircea Galiceanu

Phys. Rev. E 100, 022501 (2019) - Published 14 August, 2019

Colloids, Complex Fluids, and Active Matter

Active Ornstein-Uhlenbeck particles

L. L. Bonilla

Phys. Rev. E 100, 022601 (2019) - Published 6 August, 2019

Hexagonal deposits of colloidal particles

Hee Kyeong Park, Yeseul Kim, Hyeongho Min, Changhyun Pang, and Byung Mook Weon

Phys. Rev. E 100, 022602 (2019) - Published 6 August, 2019

Mesoscopic simulations of anisotropic chemically powered nanomotors

Pierre de Buyl

Phys. Rev. E 100, 022603 (2019) - Published 12 August, 2019

Frequency-dependent force between ac-voltage-biased plates in electrolyte solutions

M. Checa, R. Millan-Solsona, and G. Gomila

Phys. Rev. E 100, 022604 (2019) - Published 20 August, 2019

Discontinuous phase transition in chemotactic aggregation with density-dependent pressure

Gyu Ho Bae and Seung Ki Baek

Phys. Rev. E 100, 022605 (2019) - Published 23 August, 2019

EDITORS' SUGGESTION

Clustering and anisotropic correlated percolation in polar flocks

Nikos Kyriakopoulos, Hugues Chaté, and Francesco Ginelli

Phys. Rev. E 100, 022606 (2019) - Published 28 August, 2019

Nonequilibrium probability flux of a thermally driven micromachine

Isamu Sou, Yuto Hosaka, Kento Yasuda, and Shigeyuki Komura

Phys. Rev. E 100, 022607 (2019) - Published 28 August, 2019

Diffusion-jump model for the combined Brownian and Néel relaxation dynamics of ferrofluids in the presence of external fields and flow

Patrick Ilg

Phys. Rev. E 100, 022608 (2019) - Published 29 August, 2019

Traveling band formation in feedback-driven colloids

Sonja Tarama, Stefan U. Egelhaaf, and Hartmut Löwen

Phys. Rev. E 100, 022609 (2019) - Published 30 August, 2019

Liquid Crystals

Tunable wrinkling of thin nematic liquid crystal elastomer sheets

Madison S. Krieger and Marcelo A. Dias

Phys. Rev. E 100, 022701 (2019) - Published 13 August, 2019

Molecular theory of a ferromagnetic nematic liquid crystal

Immanuel S. Geier, Stefanie M. Wandrei, Robert A. Skutnik, and Martin Schoen

Phys. Rev. E 100, 022702 (2019) - Published 13 August, 2019

Manipulation of cholesteric liquid crystal phase behavior and molecular assembly by molecular chirality

Liang Wu and Huai Sun

Phys. Rev. E 100, 022703 (2019) - Published 22 August, 2019

Mechanisms to splay-bend nematic phases

N. Chaturvedi and Randall D. Kamien

Phys. Rev. E 100, 022704 (2019) - Published 22 August, 2019

Landau theory for smectic- $A$ –hexatic- $B$ coexistence in smectic films

E. I. Kats, V. V. Lebedev, and E. S. Pikina

Phys. Rev. E 100, 022705 (2019) - Published 26 August, 2019

Simple model for the stripe phase in compounds with bent-core molecules which exhibit a lower-temperature ferroelectric smectic- $A$ phase

N. V. Madhusudana

Phys. Rev. E 100, 022706 (2019) - Published 27 August, 2019

Type-I and type-II smectic- $C^{*}$ systems: A twist on the electroclinic critical point

Joshua Ziegler, Sean Echols, Matthew J. Moelter, and Karl Saunders

Phys. Rev. E 100, 022707 (2019) - Published 29 August, 2019

Films and Interfaces

Emergence of a linear slope region of the isotherm in the first-order liquid-expanded–liquid-condensed phase transition in Langmuir monolayers

Eiji Hatta and Ko Nihei

Phys. Rev. E 100, 022801 (2019) - Published 1 August, 2019

Surface deformations in dynamic thermocapillary convection under partial slip

Katarzyna N. Kowal, Stephen H. Davis, and Peter W. Voorhees

Phys. Rev. E 100, 022802 (2019) - Published 19 August, 2019

Correlation-function structure in square-gradient models of the liquid-gas interface: Exact results and reliable approximations

A. O. Parry and C. Rascón

Phys. Rev. E 100, 022803 (2019) - Published 26 August, 2019

Roughness-dependent wetting behavior of vapor-deposited metallic thin films

Farnaz Foadi, S. Mehdi Vaez Allaei, George Palasantzas, and Mohammad Reza Mohammadizadeh

Phys. Rev. E 100, 022804 (2019) - Published 26 August, 2019

Granular Materials

Effective drag of a rod in fluid-saturated granular beds

Benjamin Allen and Arshad Kudrolli

Phys. Rev. E 100, 022901 (2019) - Published 7 August, 2019

Janssen effect in dynamic particulate systems

C. R. K. Windows-Yule, Sebastian Mühlbauer, L. A. Torres Cisneros, P. Nair, V. Marzulli, and T. Pöschel

Phys. Rev. E 100, 022902 (2019) - Published 20 August, 2019

Densest versus jammed packings of bent-core trimers

Austin D. Griffith and Robert S. Hoy

Phys. Rev. E 100, 022903 (2019) - Published 29 August, 2019

Solid Mechanics

Seismiclike organization of avalanches in a driven long-range elastic string as a paradigm of brittle cracks

Jonathan Barés, Daniel Bonamy, and Alberto Rosso

Phys. Rev. E 100, 023001 (2019) - Published 1 August, 2019

Predicting tearing paths in thin sheets

A. Ibarra, J. F. Fuentealba, B. Roman, and F. Melo

Phys. Rev. E 100, 023002 (2019) - Published 8 August, 2019

Fluid Dynamics

Large effect of lateral box size in molecular dynamics simulations of liquid-solid friction

Koshun Ogawa, Haruki Oga, Hiroki Kusudo, Yasutaka Yamaguchi, Takeshi Omori, Samy Merabia, and Laurent Joly

Phys. Rev. E 100, 023101 (2019) - Published 5 August, 2019

Heavy particles in a persistent random flow with traps

J. Meibohm and B. Mehlig

Phys. Rev. E 100, 023102 (2019) - Published 5 August, 2019

Kelvin-Helmholtz and Holmboe instabilities of a diffusive interface between miscible phases

T. Zagvozkin, A. Vorobev, and T. Lyubimova

Phys. Rev. E 100, 023103 (2019) - Published 5 August, 2019

Bulk-driven acoustic streaming at resonance in closed microcavities

Jacob S. Bach and Henrik Bruus

Phys. Rev. E 100, 023104 (2019) - Published 7 August, 2019

Numerical investigation of vibration-induced droplet shedding on smooth surfaces with large contact angles

Mostafa Moradi, Mohammad Hassan Rahimian, and Seyed Farshid Chini

Phys. Rev. E 100, 023105 (2019) - Published 7 August, 2019

Superfluidity inside carbon nanotubes

Leonid. V. Mirantsev

Phys. Rev. E 100, 023106 (2019) - Published 13 August, 2019

Defect production by pure phase twist injection as Aharonov-Bohm effect

Matteo Foresti and Renzo L. Ricca

Phys. Rev. E 100, 023107 (2019) - Published 16 August, 2019

EDITORS' SUGGESTION

Molecular simulation of thin liquid films: Thermal fluctuations and instability

Yixin Zhang, James E. Sprittles, and Duncan A. Lockerby

Phys. Rev. E 100, 023108 (2019) - Published 16 August, 2019

Wall-mounted flexible plates in a two-dimensional channel trigger early flow instabilities

Gaurav Singh and Rajaram Lakkaraju

Phys. Rev. E 100, 023109 (2019) - Published 20 August, 2019

Identifying the pattern of breakdown in a laminar-turbulent transition via binary sequence statistics and cellular-automaton simulations

Wen Zhang, Peiqing Liu, Hao Guo, Minping Wan, Jianchun Wang, and Shiyi Chen

Phys. Rev. E 100, 023110 (2019) - Published 20 August, 2019

Density and tracer statistics in compressible turbulence: Phase transition to multifractality

Itzhak Fouxon and Michael Mond

Phys. Rev. E 100, 023111 (2019) - Published 20 August, 2019

Effects of electronic friction from the walls on water flow in carbon nanotubes and on water desalination

J. B. Sokoloff

Phys. Rev. E 100, 023112 (2019) - Published 20 August, 2019

Statics and dynamics of polymeric droplets on chemically homogeneous and heterogeneous substrates

Ö. Öztürk and J. Servantie

Phys. Rev. E 100, 023113 (2019) - Published 22 August, 2019

Electric fields enable tunable surfactant transport to microscale fluid interfaces

Rajarshi Sengupta, Aditya S. Khair, and Lynn M. Walker

Phys. Rev. E 100, 023114 (2019) - Published 23 August, 2019

EDITORS' SUGGESTION

Haines jumps: Pore scale mechanisms

Zhonghao Sun and J. Carlos Santamarina

Phys. Rev. E 100, 023115 (2019) - Published 27 August, 2019

Periodic solutions and chaos in the Barkley pipe model on a finite domain

K. Y. Short

Phys. Rev. E 100, 023116 (2019) - Published 28 August, 2019

Taylor-vortex flow in shear-thinning fluids

S. Topayev, C. Nouar, D. Bernardin, A. Neveu, and S. A. Bahrani

Phys. Rev. E 100, 023117 (2019) - Published 28 August, 2019

Exact solutions for shock waves in dilute gases

F. J. Uribe and R. M. Velasco

Phys. Rev. E 100, 023118 (2019) - Published 28 August, 2019

Entropy growth and entropy production rate in binary mixture shock waves

Damir Madjarević and Srboljub Simić

Phys. Rev. E 100, 023119 (2019) - Published 30 August, 2019

Computational Physics

Improved three-dimensional color-gradient lattice Boltzmann model for immiscible two-phase flows

Z. X. Wen, Q. Li, Y. Yu, and Kai H. Luo

Phys. Rev. E 100, 023301 (2019) - Published 7 August, 2019

Pseudoentropic derivation of the regularized lattice Boltzmann method

Andreas Krämer, Dominik Wilde, Knut Küllmer, Dirk Reith, and Holger Foysi

Phys. Rev. E 100, 023302 (2019) - Published 7 August, 2019

Probing predictions due to the nonlocal interface Hamiltonian: Monte Carlo simulations of interfacial fluctuations in Ising films

L. Pang, D. P. Landau, and K. Binder

Phys. Rev. E 100, 023303 (2019) - Published 8 August, 2019

Structure retrieval from four-dimensional scanning transmission electron microscopy: Statistical analysis of potential pitfalls in high-dimensional data

Xin Li, Ondrej Dyck, Stephen Jesse, Andrew R. Lupini, Sergei V. Kalinin, and Mark P. Oxley

Phys. Rev. E 100, 023308 (2019) - Published 23 August, 2019

Lattice Boltzmann method for miscible gases: A forcing-term approach

Lucien Vienne, Simon Marié, and Francesco Grasso

Phys. Rev. E 100, 023309 (2019) - Published 28 August, 2019

COMMENTS

Comment on “Rényi entropy yields artificial biases not in the data and incorrect updating due to the finite-size data”

Petr Jizba and Jan Korbel

Phys. Rev. E 100, 026101 (2019) - Published 20 August, 2019

Reply to “Comment on ‘Rényi entropy yields artificial biases not in the data and incorrect updating due to the finite-size data' ”

Thomas Oikonomou and G. Baris Bagci

Phys. Rev. E 100, 026102 (2019) - Published 20 August, 2019

ERRATA

Erratum: Fragility of network-forming glasses: A universal dependence on the topological connectivity [Phys. Rev. E 92, 062804 (2015)]

D. L. Sidebottom

Phys. Rev. E 100, 029901 (2019) - Published 13 August, 2019