EDITORIALS AND ANNOUNCEMENTS

Announcement: Changes to the Table of Contents of Physical Review E

Phys. Rev. E 93, 010001 (2016) - Published 4 January, 2016

Announcement: Physical Review E Scope Description to Include Biological Physics

Phys. Rev. E 93, 010002 (2016) - Published 14 January, 2016

HIGHLIGHTED ARTICLES

Intellectual interchanges in the history of the massive online open-editing encyclopedia, Wikipedia

Jinhyuk Yun (윤진혁), Sang Hoon Lee (이상훈), and Hawoong Jeong (정하웅)

Phys. Rev. E 93, 012307 (2016) - Published 22 January, 2016

A study of the entire editing history of English Wikipedia shows that the articles cluster into four categories based on how frequently and how aggressively they are edited.

Physical origin of nonequilibrium fluctuation-induced forces in fluids

T. R. Kirkpatrick, J. M. Ortiz de Zárate, and J. V. Sengers

Phys. Rev. E 93, 012148 (2016) - Published 27 January, 2016

Casimir forces have been shown to arise from fluctuations in a variety of systems, both classical and quantum. In this paper, the authors present two mechanisms for the appearance of Casimir forces in non-equilibrium fluids, namely the coupling of hydrodynamic modes and the existence of inhomogeneous thermal noise. They identify the former as the leading contribution, and show that its effect is much larger than that of other Casimir forces.

Phases and structures of sunset yellow and disodium cromoglycate mixtures in water

Akihiro Yamaguchi, Gregory P. Smith, Youngwoo Yi, Charles Xu, Silvia Biffi, Francesca Serra, Tommaso Bellini, Chenhui Zhu, and Noel A. Clark

Phys. Rev. E 93, 012704 (2016) - Published 12 January, 2016

This paper addresses the phase behavior of mixtures of chromonic liquid crystals, aggregated aromatic compounds with ionic peripherals dissolved in water. The authors find a wealth of different phases depending on the relative concentrations of the ternary mixture, and attempt to explain the resultant behavior based on the degree of order of the independent components.

Richtmyer-Meshkov instability of a three-dimensional SF6-air interface with a minimum-surface feature

Xisheng Luo, Ben Guan, Ting Si, Zhigang Zhai, and Xiansheng Wang

Phys. Rev. E 93, 013101 (2016) - Published 5 January, 2016

A detailed experimental study of the Richtmyer-Meshkov instability of a three-dimensional interface reveals bubble-like structures behind the shocked interface and slower growth than that predicted by two-dimensional linear models. Initial conditions were reproducibly prepared using a free-standing soap film to initially separate the heavy and the light gases. Evolution of the shocked interface was captured by time-resolved schlieren photography.

Slip boundary conditions over curved surfaces

Lin Guo, Shiyi Chen, and Mark O. Robbins

Phys. Rev. E 93, 013105 (2016) - Published 6 January, 2016

This paper examines the influence of the surface curvature on the slip boundary condition in simple fluids. Using molecular dynamics simulations, the authors find a distortion of the fluid structure near the wall influenced by the degree of curvature, and a change in the slip length that can be accounted for by the friction between the first fluid layer and the surface.

Anisotropic confinement effects in a two-dimensional plasma crystal

I. Laut, S. K. Zhdanov, C. Räth, H. M. Thomas, and G. E. Morfill

Phys. Rev. E 93, 013204 (2016) - Published 8 January, 2016

The mode-coupling instability is a mechanism that induces melting of a strongly coupled plasma crystal to a weakly coupled swirling state. The authors study the recently observed breaking of spectral symmetry of the wave-energy distribution of the melting dusty plasma, and ascribe it to the anisotropy of the confining potential well.

RAPID COMMUNICATIONS

Statistical Physics

Self-averaging and ergodicity of subdiffusion in quenched random media

Marco Dentz, Anna Russian, and Philippe Gouze

Phys. Rev. E 93, 010101(R) (2016) - Published 19 January, 2016

Nonlinear Dynamics and Chaos

Control and generation of drifting patterns by asymmetrical Fourier filtering

E. Louvergneaux, V. Odent, S. Coulibaly, U. Bortolozzo, and S. Residori

Phys. Rev. E 93, 010201(R) (2016) - Published 7 January, 2016

Biological Physics

Equilibrium microphase separation in the two-leaflet model of lipid membranes

Ramon Reigada and Alexander S. Mikhailov

Phys. Rev. E 93, 010401(R) (2016) - Published 25 January, 2016

Periodically driven DNA: Theory and simulation

Sanjay Kumar, Ravinder Kumar, and Wolfhard Janke

Phys. Rev. E 93, 010402(R) (2016) - Published 29 January, 2016

Polymers

Large deformation of self-oscillating polymer gel

Shingo Maeda, Terukazu Kato, Yuji Otsuka, Naoki Hosoya, Matteo Cianchetti, and Cecilia Laschi

Phys. Rev. E 93, 010501(R) (2016) - Published 5 January, 2016

Films and Interfaces

Microscopic treatment of solute trapping and drag

Harith Humadi, J. J. Hoyt, and Nikolas Provatas

Phys. Rev. E 93, 010801(R) (2016) - Published 13 January, 2016

Granular Materials

Extreme stiffness tunability through the excitation of nonlinear defect modes

M. Serra-Garcia, J. Lydon, and C. Daraio

Phys. Rev. E 93, 010901(R) (2016) - Published 12 January, 2016

Solid Mechanics

Nonlinear plastic modes in disordered solids

Luka Gartner and Edan Lerner

Phys. Rev. E 93, 011001(R) (2016) - Published 28 January, 2016

Fluid Dynamics

Sub-Gaussian behavior of the Townsend-Perry constants in turbulent boundary layers

Björn Birnir and Xi Chen

Phys. Rev. E 93, 011101(R) (2016) - Published 6 January, 2016

Anomalous dissipation and kinetic-energy distribution in pipes at very high Reynolds numbers

Xi Chen, Bo-Bo Wei, Fazle Hussain, and Zhen-Su She

Phys. Rev. E 93, 011102(R) (2016) - Published 25 January, 2016

Computational Physics

From measurements to inferences of physical quantities in numerical simulations

Tota Nakamura

Phys. Rev. E 93, 011301(R) (2016) - Published 8 January, 2016

ARTICLES

Statistical Physics

Nonequilibrium behaviors of the three-dimensional Heisenberg model in the Swendsen-Wang algorithm

Yoshihiko Nonomura and Yusuke Tomita

Phys. Rev. E 93, 012101 (2016) - Published 4 January, 2016

Exploring percolative landscapes: Infinite cascades of geometric phase transitions

P. N. Timonin and Gennady Y. Chitov

Phys. Rev. E 93, 012102 (2016) - Published 6 January, 2016

Simple average expression for shear-stress relaxation modulus

J. P. Wittmer, H. Xu, and J. Baschnagel

Phys. Rev. E 93, 012103 (2016) - Published 7 January, 2016

Random-field Ising model on isometric lattices: Ground states and non-Porod scattering

Arunkumar Bupathy, Varsha Banerjee, and Sanjay Puri

Phys. Rev. E 93, 012104 (2016) - Published 7 January, 2016

Hysteretic and intermittent regimes in the subcritical bifurcation of a quasi-one-dimensional system of interacting particles

Tommy Dessup, Christophe Coste, and Michel Saint Jean

Phys. Rev. E 93, 012105 (2016) - Published 7 January, 2016

Absence of absorbing phase transitions in a conserved lattice-gas model in one dimension

Sungchul Kwon and Jin Min Kim

Phys. Rev. E 93, 012106 (2016) - Published 7 January, 2016

Quantum phase transition in a coupled two-level system embedded in anisotropic three-dimensional photonic crystals

H. Z. Shen, X. Q. Shao, G. C. Wang, X. L. Zhao, and X. X. Yi

Phys. Rev. E 93, 012107 (2016) - Published 7 January, 2016

Phase transition of anisotropic frustrated Heisenberg model on the square lattice

Ai-Yuan Hu and Huai-Yu Wang

Phys. Rev. E 93, 012108 (2016) - Published 11 January, 2016

Superfluid phase transition with activated velocity fluctuations: Renormalization group approach

Michal Dančo, Michal Hnatič, Marina V. Komarova, Tomáš Lučivjanský, and Mikhail Yu. Nalimov

Phys. Rev. E 93, 012109 (2016) - Published 11 January, 2016

Continuous and discontinuous absorbing-state phase transitions on Voronoi-Delaunay random lattices

Marcelo M. de Oliveira, Sidiney G. Alves, and Silvio C. Ferreira

Phys. Rev. E 93, 012110 (2016) - Published 11 January, 2016

Nonequilibrium thermodynamic potentials for continuous-time Markov chains

Gatien Verley

Phys. Rev. E 93, 012111 (2016) - Published 11 January, 2016

Kinetic theory of age-structured stochastic birth-death processes

Chris D. Greenman and Tom Chou

Phys. Rev. E 93, 012112 (2016) - Published 11 January, 2016

Macroscopic time-reversal symmetry breaking at a nonequilibrium phase transition

Pyoung-Seop Shim, Hyun-Myung Chun, and Jae Dong Noh

Phys. Rev. E 93, 012113 (2016) - Published 11 January, 2016

Large fluctuations and singular behavior of nonequilibrium systems

D. Pinna, A. D. Kent, and D. L. Stein

Phys. Rev. E 93, 012114 (2016) - Published 11 January, 2016

Coulomb potential V(r)=1/r problem on the Bethe lattice

Olga Petrova and Roderich Moessner

Phys. Rev. E 93, 012115 (2016) - Published 11 January, 2016

Connectivity percolation in suspensions of attractive square-well spherocylinders

Mohit Dixit, Hugues Meyer, and Tanja Schilling

Phys. Rev. E 93, 012116 (2016) - Published 11 January, 2016

Order-parameter scaling in fluctuation-dominated phase ordering

Rajeev Kapri, Malay Bandyopadhyay, and Mustansir Barma

Phys. Rev. E 93, 012117 (2016) - Published 11 January, 2016

Non-self-averaging in Ising spin glasses and hyperuniversality

P. H. Lundow and I. A. Campbell

Phys. Rev. E 93, 012118 (2016) - Published 11 January, 2016

On-site residence time in a driven diffusive system: Violation and recovery of a mean-field description

J. Messelink, R. Rens, M. Vahabi, F. C. MacKintosh, and A. Sharma

Phys. Rev. E 93, 012119 (2016) - Published 11 January, 2016

Optimizing work output for finite-sized heat reservoirs: Beyond linear response

Yan Wang

Phys. Rev. E 93, 012120 (2016) - Published 11 January, 2016

Thermostatistics of small nonlinear systems: Poissonian athermal bath

Welles A. M. Morgado and Sílvio M. Duarte Queirós

Phys. Rev. E 93, 012121 (2016) - Published 12 January, 2016

Nonstationary Feller process with time-varying coefficients

Jaume Masoliver

Phys. Rev. E 93, 012122 (2016) - Published 13 January, 2016

Minimal exactly solved model with the extreme Thouless effect

Agata Fronczak, Piotr Fronczak, and Andrzej Krawiecki

Phys. Rev. E 93, 012124 (2016) - Published 14 January, 2016

Numerical evidence for approximate consistency and Markovianity of some quantum histories in a class of finite closed spin systems

Daniel Schmidtke and Jochen Gemmer

Phys. Rev. E 93, 012125 (2016) - Published 19 January, 2016

Dynamical thermalization in Bose-Hubbard systems

Peter Schlagheck and Dima L. Shepelyansky

Phys. Rev. E 93, 012126 (2016) - Published 19 January, 2016

Calculating work in weakly driven quantum master equations: Backward and forward equations

Fei Liu

Phys. Rev. E 93, 012127 (2016) - Published 19 January, 2016

Probability-current analysis of energy transport in open quantum systems

Jan J. J. Roden and K. Birgitta Whaley

Phys. Rev. E 93, 012128 (2016) - Published 19 January, 2016

Conflict between fastest relaxation of a Markov process and detailed balance condition

Kazutaka Takahashi and Masayuki Ohzeki

Phys. Rev. E 93, 012129 (2016) - Published 19 January, 2016

Stroboscopic prethermalization in weakly interacting periodically driven systems

Elena Canovi, Marcus Kollar, and Martin Eckstein

Phys. Rev. E 93, 012130 (2016) - Published 19 January, 2016

Quantum discord length is enhanced while entanglement length is not by introducing disorder in a spin chain

Debasis Sadhukhan, Sudipto Singha Roy, Debraj Rakshit, R. Prabhu, Aditi Sen(De), and Ujjwal Sen

Phys. Rev. E 93, 012131 (2016) - Published 19 January, 2016

Entropy production of a Brownian ellipsoid in the overdamped limit

Raffaele Marino, Ralf Eichhorn, and Erik Aurell

Phys. Rev. E 93, 012132 (2016) - Published 19 January, 2016

Gauge invariance and geometric phase in nonequilibrium thermodynamics

Simone Borlenghi

Phys. Rev. E 93, 012133 (2016) - Published 19 January, 2016

Lloyd-model generalization: Conductance fluctuations in one-dimensional disordered systems

J. A. Méndez-Bermúdez, A. J. Martínez-Mendoza, V. A. Gopar, and I. Varga

Phys. Rev. E 93, 012135 (2016) - Published 20 January, 2016

Survival of interacting diffusing particles inside a domain with absorbing boundary

Tal Agranov, Baruch Meerson, and Arkady Vilenkin

Phys. Rev. E 93, 012136 (2016) - Published 20 January, 2016

Fine structure of the entanglement entropy in the O(2) model

Li-Ping Yang, Yuzhi Liu, Haiyuan Zou, Z. Y. Xie, and Y. Meurice

Phys. Rev. E 93, 012138 (2016) - Published 22 January, 2016

Pattern density function for reconstruction of three-dimensional porous media from a single two-dimensional image

Mingliang Gao, Qizhi Teng, Xiaohai He, Chen Zuo, and ZhengJi Li

Phys. Rev. E 93, 012140 (2016) - Published 22 January, 2016

Phase transition of the Ising model on a fractal lattice

Jozef Genzor, Andrej Gendiar, and Tomotoshi Nishino

Phys. Rev. E 93, 012141 (2016) - Published 22 January, 2016

Efficiency at maximum power of a discrete feedback ratchet

Javier Jarillo, Tomás Tangarife, and Francisco J. Cao

Phys. Rev. E 93, 012142 (2016) - Published 22 January, 2016

Phase transitions and entropies for synchronizing oscillators

Martin Bier, Bartosz Lisowski, and Ewa Gudowska-Nowak

Phys. Rev. E 93, 012143 (2016) - Published 25 January, 2016

Scale invariance implies conformal invariance for the three-dimensional Ising model

Bertrand Delamotte, Matthieu Tissier, and Nicolás Wschebor

Phys. Rev. E 93, 012144 (2016) - Published 25 January, 2016

Quantum fuel with multilevel atomic coherence for ultrahigh specific work in a photonic Carnot engine

Deniz Türkpençe and Özgür E. Müstecaplıoğlu

Phys. Rev. E 93, 012145 (2016) - Published 27 January, 2016

Effect of geometrical frustration on inverse freezing

M. Schmidt, C. V. Morais, and F. M. Zimmer

Phys. Rev. E 93, 012147 (2016) - Published 27 January, 2016

Physical origin of nonequilibrium fluctuation-induced forces in fluids

T. R. Kirkpatrick, J. M. Ortiz de Zárate, and J. V. Sengers

Phys. Rev. E 93, 012148 (2016) - Published 27 January, 2016

Casimir forces have been shown to arise from fluctuations in a variety of systems, both classical and quantum. In this paper, the authors present two mechanisms for the appearance of Casimir forces in non-equilibrium fluids, namely the coupling of hydrodynamic modes and the existence of inhomogeneous thermal noise. They identify the former as the leading contribution, and show that its effect is much larger than that of other Casimir forces.

Experimental study of stable imbibition displacements in a model open fracture. I. Local avalanche dynamics

Xavier Clotet, Jordi Ortín, and Stéphane Santucci

Phys. Rev. E 93, 012149 (2016) - Published 28 January, 2016

Experimental study of stable imbibition displacements in a model open fracture. II. Scale-dependent avalanche dynamics

Xavier Clotet, Stéphane Santucci, and Jordi Ortín

Phys. Rev. E 93, 012150 (2016) - Published 28 January, 2016

Directed percolation process in the presence of velocity fluctuations: Effect of compressibility and finite correlation time

N. V. Antonov, M. Hnatič, A. S. Kapustin, T. Lučivjanský, and L. Mižišin

Phys. Rev. E 93, 012151 (2016) - Published 29 January, 2016

Nonlinear Dynamics and Chaos

Resonant torus-assisted tunneling

Chang-Hwan Yi, Hyeon-Hye Yu, and Chil-Min Kim

Phys. Rev. E 93, 012201 (2016) - Published 4 January, 2016

Uniform framework for the recurrence-network analysis of chaotic time series

Rinku Jacob, K. P. Harikrishnan, R. Misra, and G. Ambika

Phys. Rev. E 93, 012202 (2016) - Published 6 January, 2016

Energy shell structure in a dielectric elliptic microcavity

Chang-Hwan Yi, Hyeon-Hye Yu, Ji-Won Lee, Ji-Hwan Kim, and Chil-Min Kim

Phys. Rev. E 93, 012203 (2016) - Published 6 January, 2016

Chaos in the honeycomb optical-lattice unit cell

Max D. Porter and L. E. Reichl

Phys. Rev. E 93, 012204 (2016) - Published 7 January, 2016

Chimera states in bursting neurons

Bidesh K. Bera, Dibakar Ghosh, and M. Lakshmanan

Phys. Rev. E 93, 012205 (2016) - Published 11 January, 2016

Infinite hierarchy of nonlinear Schrödinger equations and their solutions

A. Ankiewicz, D. J. Kedziora, A. Chowdury, U. Bandelow, and N. Akhmediev

Phys. Rev. E 93, 012206 (2016) - Published 11 January, 2016

Phase oscillators in modular networks: The effect of nonlocal coupling

Sangeeta Rani Ujjwal, Nirmal Punetha, and Ramakrishna Ramaswamy

Phys. Rev. E 93, 012207 (2016) - Published 12 January, 2016

Deterministic particle transport in a ratchet flow

Philippe Beltrame, Mounia Makhoul, and Maminirina Joelson

Phys. Rev. E 93, 012208 (2016) - Published 14 January, 2016

Chimera patterns under the impact of noise

Sarah A. M. Loos, Jens Christian Claussen, Eckehard Schöll, and Anna Zakharova

Phys. Rev. E 93, 012209 (2016) - Published 19 January, 2016

Correlation functions and correlation widths in quantum-chaotic scattering for mesoscopic systems and nuclei

J. G. G. S. Ramos, A. L. R. Barbosa, B. V. Carlson, T. Frederico, and M. S. Hussein

Phys. Rev. E 93, 012210 (2016) - Published 19 January, 2016

Competition between drift and spatial defects leads to oscillatory and excitable dynamics of dissipative solitons

P. Parra-Rivas, D. Gomila, M. A. Matías, P. Colet, and L. Gelens

Phys. Rev. E 93, 012211 (2016) - Published 20 January, 2016

Experimental and theoretical approach for the clustering of globally coupled density oscillators based on phase response

Masanobu Horie, Tatsunari Sakurai, and Hiroyuki Kitahata

Phys. Rev. E 93, 012212 (2016) - Published 20 January, 2016

Generalized Gaussian wave packet dynamics: Integrable and chaotic systems

Harinder Pal, Manan Vyas, and Steven Tomsovic

Phys. Rev. E 93, 012213 (2016) - Published 21 January, 2016

Breather-to-soliton transitions, nonlinear wave interactions, and modulational instability in a higher-order generalized nonlinear Schrödinger equation

Lei Wang, Jian-Hui Zhang, Zi-Qi Wang, Chong Liu, Min Li, Feng-Hua Qi, and Rui Guo

Phys. Rev. E 93, 012214 (2016) - Published 22 January, 2016

Hopf bifurcation analysis for a dissipative system with asymmetric interaction: Analytical explanation of a specific property of highway traffic

Yasuyuki Nomura, Satoshi Saito, Ryosuke Ishiwata, and Yuki Sugiyama

Phys. Rev. E 93, 012215 (2016) - Published 22 January, 2016

Phase-locked scroll waves defy turbulence induced by negative filament tension

Teng-Chao Li, Xiang Gao, Fei-Fei Zheng, Mei-Chun Cai, Bing-Wei Li, Hong Zhang, and Hans Dierckx

Phys. Rev. E 93, 012216 (2016) - Published 25 January, 2016

Rogue waves for a system of coupled derivative nonlinear Schrödinger equations

H. N. Chan, B. A. Malomed, K. W. Chow, and E. Ding

Phys. Rev. E 93, 012217 (2016) - Published 26 January, 2016

Chimera states in networks of phase oscillators: The case of two small populations

Mark J. Panaggio, Daniel M. Abrams, Peter Ashwin, and Carlo R. Laing

Phys. Rev. E 93, 012218 (2016) - Published 28 January, 2016

Discrete breathers for a discrete nonlinear Schrödinger ring coupled to a central site

Peter Jason and Magnus Johansson

Phys. Rev. E 93, 012219 (2016) - Published 29 January, 2016

Networks and Complex Systems

Temporal dynamics of connectivity and epidemic properties of growing networks

Babak Fotouhi and Mehrdad Khani Shirkoohi

Phys. Rev. E 93, 012301 (2016) - Published 6 January, 2016

Spontaneous symmetry breaking and phase coexistence in two-color networks

V. Avetisov, A. Gorsky, S. Nechaev, and O. Valba

Phys. Rev. E 93, 012302 (2016) - Published 6 January, 2016

Community detection in networks with unequal groups

Pan Zhang, Cristopher Moore, and M. E. J. Newman

Phys. Rev. E 93, 012303 (2016) - Published 6 January, 2016

Unwinding the hairball graph: Pruning algorithms for weighted complex networks

Navid Dianati

Phys. Rev. E 93, 012304 (2016) - Published 11 January, 2016

Neural networks with excitatory and inhibitory components: Direct and inverse problems by a mean-field approach

Matteo di Volo, Raffaella Burioni, Mario Casartelli, Roberto Livi, and Alessandro Vezzani

Phys. Rev. E 93, 012305 (2016) - Published 13 January, 2016

Structural inference for uncertain networks

Travis Martin, Brian Ball, and M. E. J. Newman

Phys. Rev. E 93, 012306 (2016) - Published 15 January, 2016

Intellectual interchanges in the history of the massive online open-editing encyclopedia, Wikipedia

Jinhyuk Yun (윤진혁), Sang Hoon Lee (이상훈), and Hawoong Jeong (정하웅)

Phys. Rev. E 93, 012307 (2016) - Published 22 January, 2016

A study of the entire editing history of English Wikipedia shows that the articles cluster into four categories based on how frequently and how aggressively they are edited.

Identifying the direct risk source to contain epidemics more effectively

Zhijun Yan, He Huang, Yahong Chen, and Yaohui Pan

Phys. Rev. E 93, 012308 (2016) - Published 22 January, 2016

Value of peripheral nodes in controlling multilayer scale-free networks

Yan Zhang, Antonios Garas, and Frank Schweitzer

Phys. Rev. E 93, 012309 (2016) - Published 27 January, 2016

Biological Physics

Automated inference procedure for the determination of cell growth parameters

Edouard A. Harris, Eun Jee Koh, Jason Moffat, and David R. McMillen

Phys. Rev. E 93, 012402 (2016) - Published 7 January, 2016

Rigidity of transmembrane proteins determines their cluster shape

Hamidreza Jafarinia, Atefeh Khoshnood, and Mir Abbas Jalali

Phys. Rev. E 93, 012403 (2016) - Published 7 January, 2016

Analytical catch-slip bond model for arbitrary forces and loading rates

J. T. Bullerjahn and K. Kroy

Phys. Rev. E 93, 012404 (2016) - Published 11 January, 2016

Theory of pinned fronts

Haim Weissmann, Nadav M. Shnerb, and David A. Kessler

Phys. Rev. E 93, 012405 (2016) - Published 11 January, 2016

Chaperone-assisted translocation of flexible polymers in three dimensions

P. M. Suhonen and R. P. Linna

Phys. Rev. E 93, 012406 (2016) - Published 13 January, 2016

Elastic regimes of subisostatic athermal fiber networks

A. J. Licup, A. Sharma, and F. C. MacKintosh

Phys. Rev. E 93, 012407 (2016) - Published 14 January, 2016

Individuality and universality in the growth-division laws of single E. coli cells

Andrew S. Kennard, Matteo Osella, Avelino Javer, Jacopo Grilli, Philippe Nghe, Sander J. Tans, Pietro Cicuta, and Marco Cosentino Lagomarsino

Phys. Rev. E 93, 012408 (2016) - Published 19 January, 2016

Swing motion as a diffusion mechanism of lipid bilayers in a gel phase

Younghoon Oh, Jeongmin Kim, Arun Yethiraj, and Bong June Sung

Phys. Rev. E 93, 012409 (2016) - Published 19 January, 2016

Single-molecule force measurements of the polymerizing dimeric subunit of von Willebrand factor

Sithara S. Wijeratne, Jingqiang Li, Hui-Chun Yeh, Leticia Nolasco, Zhou Zhou, Angela Bergeron, Eric W. Frey, Joel L. Moake, Jing-fei Dong, and Ching-Hwa Kiang

Phys. Rev. E 93, 012410 (2016) - Published 21 January, 2016

Inducing rostrum interfacial waves by fluid-solid coupling in a Chinese river dolphin (Lipotesvexillifer)

Zhongchang Song, Yu Zhang, Chong Wei, and Xianyan Wang

Phys. Rev. E 93, 012411 (2016) - Published 22 January, 2016

Wavelength selection of rippling patterns in myxobacteria

L. L. Bonilla, A. Glavan, and A. Marquina

Phys. Rev. E 93, 012412 (2016) - Published 25 January, 2016

Membrane tubulation from giant lipid vesicles in alternating electric fields

K. Antonova, V. Vitkova, and C. Meyer

Phys. Rev. E 93, 012413 (2016) - Published 25 January, 2016

Cell-substrate impedance fluctuations of single amoeboid cells encode cell-shape and adhesion dynamics

Helmar Leonhardt, Matthias Gerhardt, Nadine Höppner, Kirsten Krüger, Marco Tarantola, and Carsten Beta

Phys. Rev. E 93, 012414 (2016) - Published 25 January, 2016

Transient amplification limits noise suppression in biochemical networks

John Dixon, Anika Lindemann, and Jonathan H. McCoy

Phys. Rev. E 93, 012415 (2016) - Published 26 January, 2016

Closed-loop feedback control and bifurcation analysis of epileptiform activity via optogenetic stimulation in a mathematical model of human cortex

Prashanth Selvaraj, Jamie W. Sleigh, Heidi E. Kirsch, and Andrew J. Szeri

Phys. Rev. E 93, 012416 (2016) - Published 26 January, 2016

Nonuniform elastic properties of macromolecules and effect of prestrain on their continuum nature

Ankush Aggarwal, Eric R. May, Charles L. Brooks, III, and William S. Klug

Phys. Rev. E 93, 012417 (2016) - Published 28 January, 2016

Polymers

Determination of linear viscoelastic properties of an entangled polymer melt by probe rheology simulations

Mir Karim, Tsutomu Indei, Jay D. Schieber, and Rajesh Khare

Phys. Rev. E 93, 012501 (2016) - Published 25 January, 2016

Nature of the collapse transition in interacting self-avoiding trails

Tiago J. Oliveira and Jürgen F. Stilck

Phys. Rev. E 93, 012502 (2016) - Published 27 January, 2016

Shell formation in short like-charged polyelectrolytes in a harmonic trap

Sandipan Dutta and Y. S. Jho

Phys. Rev. E 93, 012503 (2016) - Published 27 January, 2016

Strong-coupling electrostatic theory of polymer counterions close to planar charges

Sandipan Dutta and Y. S. Jho

Phys. Rev. E 93, 012504 (2016) - Published 29 January, 2016

Colloids, Complex Fluids, and Active Matter

Poisson-Boltzmann thermodynamics of counterions confined by curved hard walls

Ladislav Šamaj and Emmanuel Trizac

Phys. Rev. E 93, 012601 (2016) - Published 6 January, 2016

Analysis of spatial correlations in a model two-dimensional liquid through eigenvalues and eigenvectors of atomic-level stress matrices

V. A. Levashov and M. G. Stepanov

Phys. Rev. E 93, 012602 (2016) - Published 8 January, 2016

Theory for the dynamics of dense systems of athermal self-propelled particles

Grzegorz Szamel

Phys. Rev. E 93, 012603 (2016) - Published 8 January, 2016

Two-scale evolution during shear reversal in dense suspensions

Christopher Ness and Jin Sun

Phys. Rev. E 93, 012604 (2016) - Published 8 January, 2016

Charge reversal at a planar boundary between two dielectrics

Zhi-Yong Wang

Phys. Rev. E 93, 012605 (2016) - Published 12 January, 2016

Nonholonomic diffusion of a stochastic sled

Peter Jung, Giampiero Marchegiani, and Fabio Marchesoni

Phys. Rev. E 93, 012606 (2016) - Published 13 January, 2016

Improved efficiency of heat generation in nonlinear dynamics of magnetic nanoparticles

J. Rácz, P. F. de Châtel, I. A. Szabó, L. Szunyogh, and I. Nándori

Phys. Rev. E 93, 012607 (2016) - Published 14 January, 2016

Colloidal particles driven across periodic optical-potential-energy landscapes

Michael P. N. Juniper, Arthur V. Straube, Dirk G. A. L. Aarts, and Roel P. A. Dullens

Phys. Rev. E 93, 012608 (2016) - Published 19 January, 2016

Quantitative approximation schemes for glasses

Matthieu Mangeat and Francesco Zamponi

Phys. Rev. E 93, 012609 (2016) - Published 22 January, 2016

Gelation in mixtures of polymers and bidisperse colloids

Rahul Pandey and Jacinta C. Conrad

Phys. Rev. E 93, 012610 (2016) - Published 25 January, 2016

Self-propulsion and interactions of catalytic particles in a chemically active medium

Edward J. Banigan and John F. Marko

Phys. Rev. E 93, 012611 (2016) - Published 25 January, 2016

Long-lived anomalous thermal diffusion induced by elastic cell membranes on nearby particles

Abdallah Daddi-Moussa-Ider, Achim Guckenberger, and Stephan Gekle

Phys. Rev. E 93, 012612 (2016) - Published 26 January, 2016

Influence of molecular-weight polydispersity on the glass transition of polymers

Shu-Jia Li, Shi-Jie Xie, Yan-Chun Li, Hu-Jun Qian, and Zhong-Yuan Lu

Phys. Rev. E 93, 012613 (2016) - Published 27 January, 2016

Liquid Crystals

Nematic liquid crystals in a spatially step-wise magnetic field

Gaetano Napoli and Michele Scaraggi

Phys. Rev. E 93, 012701 (2016) - Published 6 January, 2016

Electric-field-induced weakly chaotic transients in ferroelectric liquid crystals

I. Śliwa, W. Jeżewski, and W. Kuczyński

Phys. Rev. E 93, 012702 (2016) - Published 11 January, 2016

Tunable topological valence in nematic shells on spherocylindrical colloidal particles

E. J. L. de Oliveira, I. N. de Oliveira, M. L. Lyra, and L. V. Mirantsev

Phys. Rev. E 93, 012703 (2016) - Published 11 January, 2016

Phases and structures of sunset yellow and disodium cromoglycate mixtures in water

Akihiro Yamaguchi, Gregory P. Smith, Youngwoo Yi, Charles Xu, Silvia Biffi, Francesca Serra, Tommaso Bellini, Chenhui Zhu, and Noel A. Clark

Phys. Rev. E 93, 012704 (2016) - Published 12 January, 2016

This paper addresses the phase behavior of mixtures of chromonic liquid crystals, aggregated aromatic compounds with ionic peripherals dissolved in water. The authors find a wealth of different phases depending on the relative concentrations of the ternary mixture, and attempt to explain the resultant behavior based on the degree of order of the independent components.

Analytical description of the Saturn-ring defect in nematic colloids

Stan Alama, Lia Bronsard, and Xavier Lamy

Phys. Rev. E 93, 012705 (2016) - Published 22 January, 2016

Experimental realization of an incompressible Newtonian fluid in two dimensions

Zhiyuan Qi, Cheol Soo Park, Matthew A. Glaser, Joseph E. Maclennan, and Noel A. Clark

Phys. Rev. E 93, 012706 (2016) - Published 25 January, 2016

Films and Interfaces

Width and extremal height distributions of fluctuating interfaces with window boundary conditions

I. S. S. Carrasco and T. J. Oliveira

Phys. Rev. E 93, 012801 (2016) - Published 7 January, 2016

Variational formulation and numerical accuracy of a quantitative phase-field model for binary alloy solidification with two-sided diffusion

Munekazu Ohno, Tomohiro Takaki, and Yasushi Shibuta

Phys. Rev. E 93, 012802 (2016) - Published 20 January, 2016

Granular Materials

Protocol dependence of the jamming transition

Thibault Bertrand, Robert P. Behringer, Bulbul Chakraborty, Corey S. O'Hern, and Mark D. Shattuck

Phys. Rev. E 93, 012901 (2016) - Published 11 January, 2016

Scaling collapse at the jamming transition

Yoav Kallus

Phys. Rev. E 93, 012902 (2016) - Published 11 January, 2016

Model for the erosion onset of a granular bed sheared by a viscous fluid

Le Yan, Antoine Barizien, and Matthieu Wyart

Phys. Rev. E 93, 012903 (2016) - Published 11 January, 2016

Local rheological measurements in the granular flow around an intruder

A. Seguin, C. Coulais, F. Martinez, Y. Bertho, and P. Gondret

Phys. Rev. E 93, 012904 (2016) - Published 20 January, 2016

Transport coefficients of solid particles immersed in a viscous gas

Vicente Garzó, William D. Fullmer, Christine M. Hrenya, and Xiaolong Yin

Phys. Rev. E 93, 012905 (2016) - Published 21 January, 2016

Turning intractable counting into sampling: Computing the configurational entropy of three-dimensional jammed packings

Stefano Martiniani, K. Julian Schrenk, Jacob D. Stevenson, David J. Wales, and Daan Frenkel

Phys. Rev. E 93, 012906 (2016) - Published 25 January, 2016

Head-on collisions of dense granular jets

Jake Ellowitz

Phys. Rev. E 93, 012907 (2016) - Published 25 January, 2016

Mechanical impulse propagation in a three-dimensional packing of spheres confined at constant pressure

Francisco Santibanez, Rene Zuñiga, and Francisco Melo

Phys. Rev. E 93, 012908 (2016) - Published 25 January, 2016

Conical wave propagation and diffraction in two-dimensional hexagonally packed granular lattices

C. Chong, P. G. Kevrekidis, M. J. Ablowitz, and Yi-Ping Ma

Phys. Rev. E 93, 012909 (2016) - Published 25 January, 2016

Solid Mechanics

Reversible plastic events during oscillatory deformation of amorphous solids

Nikolai V. Priezjev

Phys. Rev. E 93, 013001 (2016) - Published 6 January, 2016

Mechanism of chirality conversion by periodic change of temperature: Role of chiral clusters

Hiroyasu Katsuno and Makio Uwaha

Phys. Rev. E 93, 013002 (2016) - Published 11 January, 2016

Probabilistic model of waiting times between large failures in sheared media

Braden A. W. Brinkman, Michael P. LeBlanc, Jonathan T. Uhl, Yehuda Ben-Zion, and Karin A. Dahmen

Phys. Rev. E 93, 013003 (2016) - Published 29 January, 2016

Fluid Dynamics

Richtmyer-Meshkov instability of a three-dimensional SF6-air interface with a minimum-surface feature

Xisheng Luo, Ben Guan, Ting Si, Zhigang Zhai, and Xiansheng Wang

Phys. Rev. E 93, 013101 (2016) - Published 5 January, 2016

A detailed experimental study of the Richtmyer-Meshkov instability of a three-dimensional interface reveals bubble-like structures behind the shocked interface and slower growth than that predicted by two-dimensional linear models. Initial conditions were reproducibly prepared using a free-standing soap film to initially separate the heavy and the light gases. Evolution of the shocked interface was captured by time-resolved schlieren photography.

Hydraulic transport across hydrophilic and hydrophobic nanopores: Flow experiments with water and n-hexane

Simon Gruener, Dirk Wallacher, Stefanie Greulich, Mark Busch, and Patrick Huber

Phys. Rev. E 93, 013102 (2016) - Published 4 January, 2016

Infrared properties of the energy spectrum in freely decaying isotropic turbulence

W. D. McComb

Phys. Rev. E 93, 013103 (2016) - Published 5 January, 2016

Critical behavior in the inverse to forward energy transition in two-dimensional magnetohydrodynamic flow

Kannabiran Seshasayanan and Alexandros Alexakis

Phys. Rev. E 93, 013104 (2016) - Published 6 January, 2016

Slip boundary conditions over curved surfaces

Lin Guo, Shiyi Chen, and Mark O. Robbins

Phys. Rev. E 93, 013105 (2016) - Published 6 January, 2016

This paper examines the influence of the surface curvature on the slip boundary condition in simple fluids. Using molecular dynamics simulations, the authors find a distortion of the fluid structure near the wall influenced by the degree of curvature, and a change in the slip length that can be accounted for by the friction between the first fluid layer and the surface.

Microelectrokinetic turbulence in microfluidics at low Reynolds number

Guiren Wang, Fang Yang, and Wei Zhao

Phys. Rev. E 93, 013106 (2016) - Published 6 January, 2016

Soluble surfactant spreading: How the amphiphilicity sets the Marangoni hydrodynamics

Sébastien Le Roux, Matthieu Roché, Isabelle Cantat, and Arnaud Saint-Jalmes

Phys. Rev. E 93, 013107 (2016) - Published 6 January, 2016

Spreading of turbulence in plane Couette flow

M. Couliou and R. Monchaux

Phys. Rev. E 93, 013108 (2016) - Published 6 January, 2016

Transport of inertial particles by viscous streaming in arrays of oscillating probes

Kwitae Chong, Scott D. Kelly, Stuart T. Smith, and Jeff D. Eldredge

Phys. Rev. E 93, 013109 (2016) - Published 7 January, 2016

Power-exponential velocity distributions in disordered porous media

Maciej Matyka, Jarosław Gołembiewski, and Zbigniew Koza

Phys. Rev. E 93, 013110 (2016) - Published 11 January, 2016

Particle stresses in dilute, polydisperse, two-way coupled turbulent flows

David H. Richter, Omar Garcia, and Christopher Astephen

Phys. Rev. E 93, 013111 (2016) - Published 11 January, 2016

Interparticle collision mechanism in turbulence

Jung-Il Choi, Yongnam Park, Ohjoon Kwon, and Changhoon Lee

Phys. Rev. E 93, 013112 (2016) - Published 11 January, 2016

Structure of sheared and rotating turbulence: Multiscale statistics of Lagrangian and Eulerian accelerations and passive scalar dynamics

Frank G. Jacobitz, Kai Schneider, Wouter J. T. Bos, and Marie Farge

Phys. Rev. E 93, 013113 (2016) - Published 11 January, 2016

Grouping behavior of coaxial settling particles in a narrow channel

Deming Nie, Jianzhong Lin, and Rongqian Chen

Phys. Rev. E 93, 013114 (2016) - Published 12 January, 2016

Geometrical properties of turbulent premixed flames and other corrugated interfaces

F. Thiesset, G. Maurice, F. Halter, N. Mazellier, C. Chauveau, and I. Gökalp

Phys. Rev. E 93, 013116 (2016) - Published 13 January, 2016

Evolution of secondary whirls in thermoconvective vortices: Strengthening, weakening, and disappearance in the route to chaos

D. Castaño, M. C. Navarro, and H. Herrero

Phys. Rev. E 93, 013117 (2016) - Published 14 January, 2016

Evolution of the single-mode Rayleigh-Taylor instability under the influence of time-dependent accelerations

P. Ramaprabhu, V. Karkhanis, R. Banerjee, H. Varshochi, M. Khan, and A. G. W. Lawrie

Phys. Rev. E 93, 013118 (2016) - Published 15 January, 2016

Continuation and stability of convective modulated rotating waves in spherical shells

F. Garcia, M. Net, and J. Sánchez

Phys. Rev. E 93, 013119 (2016) - Published 15 January, 2016

Metallic-thin-film instability with spatially correlated thermal noise

Javier A. Diez, Alejandro G. González, and Roberto Fernández

Phys. Rev. E 93, 013120 (2016) - Published 15 January, 2016

Diffuse interface method for a compressible binary fluid

Jiewei Liu, Gustav Amberg, and Minh Do-Quang

Phys. Rev. E 93, 013121 (2016) - Published 19 January, 2016

Statistics of highly heterogeneous flow fields confined to three-dimensional random porous media

C. Jin, P. A. Langston, G. E. Pavlovskaya, M. R. Hall, and S. P. Rigby

Phys. Rev. E 93, 013122 (2016) - Published 19 January, 2016

Thin three-dimensional droplets on an oscillating substrate with contact angle hysteresis

J. Bradshaw and J. Billingham

Phys. Rev. E 93, 013123 (2016) - Published 19 January, 2016

Nanoscale dynamics of Joule heating and bubble nucleation in a solid-state nanopore

Edlyn V. Levine, Michael M. Burns, and Jene A. Golovchenko

Phys. Rev. E 93, 013124 (2016) - Published 20 January, 2016

Spatiotemporal instability of an electrified falling film

Arghya Samanta

Phys. Rev. E 93, 013125 (2016) - Published 21 January, 2016

Phase-field theory of multicomponent incompressible Cahn-Hilliard liquids

Gyula I. Tóth, Mojdeh Zarifi, and Bjørn Kvamme

Phys. Rev. E 93, 013126 (2016) - Published 25 January, 2016

Self-similar propagation of Hermite-Gauss water-wave pulses

Shenhe Fu, Yuval Tsur, Jianying Zhou, Lev Shemer, and Ady Arie

Phys. Rev. E 93, 013127 (2016) - Published 26 January, 2016

Gas flow through rough microchannels in the transition flow regime

Zilong Deng, Yongping Chen, and Chenxi Shao

Phys. Rev. E 93, 013128 (2016) - Published 27 January, 2016

Ferrofluid patterns in Hele-Shaw cells: Exact, stable, stationary shape solutions

Sérgio A. Lira and José A. Miranda

Phys. Rev. E 93, 013129 (2016) - Published 27 January, 2016

Plasma Physics

Pair creation in collision of γ-ray beams produced with high-intensity lasers

X. Ribeyre, E. d'Humières, O. Jansen, S. Jequier, V. T. Tikhonchuk, and M. Lobet

Phys. Rev. E 93, 013201 (2016) - Published 7 January, 2016

Avalanche structural rearrangement through cracking-healing in weakly stressed cold dusty plasma liquids

Chi Yang, Wen Wang, and Lin I

Phys. Rev. E 93, 013202 (2016) - Published 8 January, 2016

Fast magnetic-field annihilation in the relativistic collisionless regime driven by two ultrashort high-intensity laser pulses

Y. J. Gu, O. Klimo, D. Kumar, Y. Liu, S. K. Singh, T. Zh. Esirkepov, S. V. Bulanov, S. Weber, and G. Korn

Phys. Rev. E 93, 013203 (2016) - Published 8 January, 2016

Anisotropic confinement effects in a two-dimensional plasma crystal

I. Laut, S. K. Zhdanov, C. Räth, H. M. Thomas, and G. E. Morfill

Phys. Rev. E 93, 013204 (2016) - Published 8 January, 2016

The mode-coupling instability is a mechanism that induces melting of a strongly coupled plasma crystal to a weakly coupled swirling state. The authors study the recently observed breaking of spectral symmetry of the wave-energy distribution of the melting dusty plasma, and ascribe it to the anisotropy of the confining potential well.

Evolution of a plasma vortex in air

Cheng-Mu Tsai and Hong-Yu Chu

Phys. Rev. E 93, 013205 (2016) - Published 11 January, 2016

Cross-field transport in Goldreich-Sridhar magnetohydrodynamic turbulence

F. Fraschetti

Phys. Rev. E 93, 013206 (2016) - Published 11 January, 2016

Attospiral generation upon interaction of circularly polarized intense laser pulses with conelike targets

Zs. Lécz and A. Andreev

Phys. Rev. E 93, 013207 (2016) - Published 21 January, 2016

Interaction-induced nonlinear refractive-index reduction of gases in the midinfrared regime

K. Schuh, J. V. Moloney, and S. W. Koch

Phys. Rev. E 93, 013208 (2016) - Published 21 January, 2016

Computational Physics

Molecular dynamics simulations of bubble nucleation in dark matter detectors

Philipp Denzel, Jürg Diemand, and Raymond Angélil

Phys. Rev. E 93, 013301 (2016) - Published 11 January, 2016

Determination of macroscopic transport coefficients of a dissipative particle dynamics solvent

Dmitrii Azarnykh, Sergey Litvinov, Xin Bian, and Nikolaus A. Adams

Phys. Rev. E 93, 013302 (2016) - Published 11 January, 2016

Multipseudopotential interaction: A consistent study of cubic equations of state in lattice Boltzmann models

Sorush Khajepor and Baixin Chen

Phys. Rev. E 93, 013303 (2016) - Published 11 January, 2016

Computational dynamics of acoustically driven microsphere systems

Connor Glosser, Carlo Piermarocchi, Jie Li, Dan Dault, and B. Shanker

Phys. Rev. E 93, 013305 (2016) - Published 15 January, 2016

Wideband analytical equivalent circuit for one-dimensional periodic stacked arrays

Carlos Molero, Raúl Rodríguez-Berral, Francisco Mesa, Francisco Medina, and Alexander B. Yakovlev

Phys. Rev. E 93, 013306 (2016) - Published 15 January, 2016

Reaction rates for a generalized reaction-diffusion master equation

Stefan Hellander and Linda Petzold

Phys. Rev. E 93, 013307 (2016) - Published 19 January, 2016

Lattice Boltzmann modeling of three-phase incompressible flows

H. Liang, B. C. Shi, and Z. H. Chai

Phys. Rev. E 93, 013308 (2016) - Published 20 January, 2016

Multiscale modeling of dislocation-precipitate interactions in Fe: From molecular dynamics to discrete dislocations

Arttu Lehtinen, Fredric Granberg, Lasse Laurson, Kai Nordlund, and Mikko J. Alava

Phys. Rev. E 93, 013309 (2016) - Published 21 January, 2016

Nonparametric k-nearest-neighbor entropy estimator

Damiano Lombardi and Sanjay Pant

Phys. Rev. E 93, 013310 (2016) - Published 21 January, 2016

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