Volume 90, Issue 2

August 2014

Browse Issues:

HIGHLIGHTED ARTICLES

EDITORS' SUGGESTION

Survival of a static target in a gas of diffusing particles with exclusion

Baruch Meerson, Arkady Vilenkin, and P. L. Krapivsky

Phys. Rev. E 90, 022120 (2014) - Published 18 August, 2014

Dodging a trap: The time-dependent “avoidance probability” that all particles in a mobile gas manage to avoid a static absorbing target is obtained analytically as a function of target size, particle concentration, and spatial dimension. In one dimension the result turns out to depend on the nature (deterministic or random) of the initial condition.

EDITORS' SUGGESTION

Jamming in finite systems: Stability, anisotropy, fluctuations, and scaling

Carl P. Goodrich, Simon Dagois-Bohy, Brian P. Tighe, Martin van Hecke, Andrea J. Liu, and Sidney R. Nagel

Phys. Rev. E 90, 022138 (2014) - Published 27 August, 2014

In the thermodynamic limit, packings of soft repulsive spheres at zero temperature exhibit a sharp transition to an isotropic jammed structure. Finite jammed systems are anisotropic, and the authors analyze the effects of finite size to understand how the isotropic limit is approached as the system size increases.

EDITORS' SUGGESTION

Laboratory alluvial fans in one dimension

L. Guerit, F. Métivier, O. Devauchelle, E. Lajeunesse, and L. Barrier

Phys. Rev. E 90, 022203 (2014) - Published 13 August, 2014

An experimental and theoretical study of a one-dimensional model of an alluvial fan provides insight into features of a familiar two-dimensional phenomenon. In their one-dimensional model, the authors show that the fan grows quasistatically at moderate sediment discharge and maintains its slope just above the critical threshold for sediment transport.

EDITORS' SUGGESTION

Complex architecture of primes and natural numbers

Guillermo García-Pérez, M. Ángeles Serrano, and Marián Boguñá

Phys. Rev. E 90, 022806 (2014) - Published 12 August, 2014

Prime numbers, and their distribution in the sequence of natural numbers, are of interest for fundamental as well as practical reasons. The authors introduce a stochastic model based on a network representation that closely matches some statistical properties of the prime numbers, and that can be useful as a tool in the study of the distribution of primes.

EDITORS' SUGGESTION

Spectral properties and dynamical tunneling in constant-width billiards

B. Dietz, T. Guhr, B. Gutkin, M. Miski-Oglu, and A. Richter

Phys. Rev. E 90, 022903 (2014) - Published 7 August, 2014

The authors study the dynamics of a certain type of quantum billiards, whose classical counterparts have a phase space that consists of two separate, chaotic, parts. While in the classical case transitions between these two parts are forbidden, the authors show experimentally and theoretically that in the quantum case tunneling is possible between the two regions with chaotic dynamics.

EDITORS' SUGGESTION

Mach-like capillary-gravity wakes

Frédéric Moisy and Marc Rabaud

Phys. Rev. E 90, 023009 (2014) - Published 18 August, 2014

This paper studies the wave pattern created by a vertical surface-piercing cylinder in the capillary-gravity regime experimentally, analytically, and numerically. The authors find that for a range of Bond numbers the angle of maximum wave amplitude follows a Mach-like law at large velocity.

RAPID COMMUNICATIONS

Statistical Physics

RAPID COMMUNICATION

Measuring the heat exchange of a quantum process

John Goold, Ulrich Poschinger, and Kavan Modi

Phys. Rev. E 90, 020101(R) (2014) - Published 12 August, 2014

RAPID COMMUNICATION

Gas-liquid coexistence for the boson square-well fluid and the ${}^{4}{He}$ binodal anomaly

Riccardo Fantoni

Phys. Rev. E 90, 020102(R) (2014) - Published 18 August, 2014

RAPID COMMUNICATION

Universality of fluctuations in the Kardar-Parisi-Zhang class in high dimensions and its upper critical dimension

S. G. Alves, T. J. Oliveira, and S. C. Ferreira

Phys. Rev. E 90, 020103(R) (2014) - Published 22 August, 2014

Granular Materials

RAPID COMMUNICATION

Spontaneous jamming and unjamming in a hopper with multiple exit orifices

Amit Kunte, Pankaj Doshi, and Ashish V. Orpe

Phys. Rev. E 90, 020201(R) (2014) - Published 20 August, 2014

RAPID COMMUNICATION

Contact changes near jamming

Merlijn S. van Deen, Johannes Simon, Zorana Zeravcic, Simon Dagois-Bohy, Brian P. Tighe, and Martin van Hecke

Phys. Rev. E 90, 020202(R) (2014) - Published 28 August, 2014

Colloids and Complex Fluids

RAPID COMMUNICATION

Percolation approach to glassy dynamics with continuously broken ergodicity

Jeferson J. Arenzon, Antonio Coniglio, Annalisa Fierro, and Mauro Sellitto

Phys. Rev. E 90, 020301(R) (2014) - Published 26 August, 2014

Films, Interfaces, and Solids

RAPID COMMUNICATION

Kinetically engendered subspinodal length scales in spontaneous dewetting of thin liquid films

Tirumala Rao Kotni, Jayati Sarkar, and Rajesh Khanna

Phys. Rev. E 90, 020401(R) (2014) - Published 25 August, 2014

Liquid Crystals

RAPID COMMUNICATION

Self-assembly via branching morphologies in nematic liquid-crystal nanocomposites

Sebastian Gurevich, Ezequiel Soule, Alejandro Rey, Linda Reven, and Nikolas Provatas

Phys. Rev. E 90, 020501(R) (2014) - Published 7 August, 2014

RAPID COMMUNICATION

Surface-induced structures in nematic liquid crystal colloids

S. B. Chernyshuk, O. M. Tovkach, and B. I. Lev

Phys. Rev. E 90, 020502(R) (2014) - Published 7 August, 2014

RAPID COMMUNICATION

Density functional theory for chiral nematic liquid crystals

S. Belli, S. Dussi, M. Dijkstra, and R. van Roij

Phys. Rev. E 90, 020503(R) (2014) - Published 27 August, 2014

RAPID COMMUNICATION

Temperature-dependent isotropic-to-nematic transition of charged nanoplates

Huawei Li, Xuezhen Wang, Ying Chen, and Zhengdong Cheng

Phys. Rev. E 90, 020504(R) (2014) - Published 29 August, 2014

Polymers

RAPID COMMUNICATION

Biomolecule transport across biomembranes in the presence of crowding: Polymer translocation driven by concentration and disorder gradients

Hendrick W. de Haan and Gary W. Slater

Phys. Rev. E 90, 020601(R) (2014) - Published 29 August, 2014

Nonlinear Dynamics and Chaos

RAPID COMMUNICATION

Class of compound dissipative solitons as a result of collisions in one and two spatial dimensions

Orazio Descalzi and Helmut R. Brand

Phys. Rev. E 90, 020901(R) (2014) - Published 4 August, 2014

Fluid Dynamics

RAPID COMMUNICATION

Flagella-induced transitions in the collective behavior of confined microswimmers

Alan Cheng Hou Tsang and Eva Kanso

Phys. Rev. E 90, 021001(R) (2014) - Published 28 August, 2014

RAPID COMMUNICATION

Stability of toroidal droplets inside yield stress materials

E. Pairam, H. Le, and A. Fernández-Nieves

Phys. Rev. E 90, 021002(R) (2014) - Published 28 August, 2014

Plasma Physics

RAPID COMMUNICATION

Acceleration of particles in imbalanced magnetohydrodynamic turbulence

Bogdan Teaca, Martin S. Weidl, Frank Jenko, and Reinhard Schlickeiser

Phys. Rev. E 90, 021101(R) (2014) - Published 11 August, 2014

ARTICLES

Statistical Physics

Extracting work from magnetic-field-coupled Brownian particles

Tian Chen, Xiang-Bin Wang, and Ting Yu

Phys. Rev. E 90, 022101 (2014) - Published 1 August, 2014

Heat-machine control by quantum-state preparation: From quantum engines to refrigerators

D. Gelbwaser-Klimovsky and G. Kurizki

Phys. Rev. E 90, 022102 (2014) - Published 4 August, 2014

Lindblad-equation approach for the full counting statistics of work and heat in driven quantum systems

Mihail Silaev, Tero T. Heikkilä, and Pauli Virtanen

Phys. Rev. E 90, 022103 (2014) - Published 5 August, 2014

Three species of Schrödinger cat states in an infinite-range spin model

Bo Zhao, Merritt C. Kerridge, and David A. Huse

Phys. Rev. E 90, 022104 (2014) - Published 5 August, 2014

Impact of deterministic and stochastic updates on network reciprocity in the prisoner's dilemma game

Jun Tanimoto

Phys. Rev. E 90, 022105 (2014) - Published 5 August, 2014

Measuring logarithmic corrections to normal diffusion in infinite-horizon billiards

Giampaolo Cristadoro, Thomas Gilbert, Marco Lenci, and David P. Sanders

Phys. Rev. E 90, 022106 (2014) - Published 7 August, 2014

Fluctuation theorems and the generalized Gibbs ensemble in integrable systems

James M. Hickey and Sam Genway

Phys. Rev. E 90, 022107 (2014) - Published 8 August, 2014

Universal expression for adiabatic pumping in terms of nonequilibrium steady states

Naoko Nakagawa

Phys. Rev. E 90, 022108 (2014) - Published 11 August, 2014

Nonequilibrium steady states in asymmetric exclusion processes on a ring with bottlenecks

Niladri Sarkar and Abhik Basu

Phys. Rev. E 90, 022109 (2014) - Published 11 August, 2014

Thermostatistics of small nonlinear systems: Gaussian thermal bath

Welles A. M. Morgado and Sílvio M. Duarte Queirós

Phys. Rev. E 90, 022110 (2014) - Published 11 August, 2014

Surface morphology of a modified ballistic deposition model

Kasturi Banerjee, J. Shamanna, and Subhankar Ray

Phys. Rev. E 90, 022111 (2014) - Published 11 August, 2014

Approach to asymptotically diffusive behavior for Brownian particles in periodic potentials: Extracting information from transients

David S. Dean and Gleb Oshanin

Phys. Rev. E 90, 022112 (2014) - Published 13 August, 2014

Statistical thermodynamics of clustered populations

Themis Matsoukas

Phys. Rev. E 90, 022113 (2014) - Published 14 August, 2014

Marginal stability in jammed packings: Quasicontacts and weak contacts

Yoav Kallus and Salvatore Torquato

Phys. Rev. E 90, 022114 (2014) - Published 14 August, 2014

Thermodynamics and the hydrophobic effect in a core-softened model and comparison with experiments

Matej Huš and Tomaz Urbic

Phys. Rev. E 90, 022115 (2014) - Published 14 August, 2014

Analysis and resolution of the ground-state degeneracy of the two-component Bose-Hubbard model

Wei Wang (王巍), Vittorio Penna, and Barbara Capogrosso-Sansone

Phys. Rev. E 90, 022116 (2014) - Published 15 August, 2014

Temperature dependence of heat conduction in the Fermi-Pasta-Ulam- $β$ lattice with next-nearest-neighbor coupling

Daxing Xiong, Yong Zhang, and Hong Zhao

Phys. Rev. E 90, 022117 (2014) - Published 15 August, 2014

Thermodynamics of the one-dimensional parallel Kawasaki model: Exact solution and mean-field approximations

Federico G. Pazzona, Pierfranco Demontis, and Giuseppe B. Suffritti

Phys. Rev. E 90, 022118 (2014) - Published 15 August, 2014

Zero-mean circular Bessel statistics and Anderson localization

Jason A. Newman, Yulu Chen, and Kevin J. Webb

Phys. Rev. E 90, 022119 (2014) - Published 18 August, 2014

EDITORS' SUGGESTION

Survival of a static target in a gas of diffusing particles with exclusion

Baruch Meerson, Arkady Vilenkin, and P. L. Krapivsky

Phys. Rev. E 90, 022120 (2014) - Published 18 August, 2014

Asymptotic properties of a bold random walk

Maurizio Serva

Phys. Rev. E 90, 022121 (2014) - Published 19 August, 2014

Canonical versus noncanonical equilibration dynamics of open quantum systems

Chun-Jie Yang, Jun-Hong An, Hong-Gang Luo, Yading Li, and C. H. Oh

Phys. Rev. E 90, 022122 (2014) - Published 20 August, 2014

Dimensional dependence of phase transitions in explosive percolation

Woosik Choi, Huiseung Chae, Soon-Hyung Yook, and Yup Kim

Phys. Rev. E 90, 022123 (2014) - Published 20 August, 2014

Nonequilibrium dynamics of a two-defect system under severe load

Leonid S. Metlov

Phys. Rev. E 90, 022124 (2014) - Published 21 August, 2014

Markov-chain approach to the distribution of ancestors in species of biparental reproduction

M. Caruso and C. Jarne

Phys. Rev. E 90, 022125 (2014) - Published 21 August, 2014

Fractional entropy decay and the third law of thermodynamics

Chun-Yang Wang, Xue-Mei Zong, Hong Zhang, and Ming Yi

Phys. Rev. E 90, 022126 (2014) - Published 21 August, 2014

Imaging critical fluctuations of pure fluids and binary mixtures

John J. Hegseth, Ana Oprisan, Yves Garrabos, and Daniel Beysens

Phys. Rev. E 90, 022127 (2014) - Published 25 August, 2014

Loop-erased random walk on a percolation cluster is compatible with Schramm-Loewner evolution

E. Daryaei

Phys. Rev. E 90, 022129 (2014) - Published 25 August, 2014

Theory of diffusion of active particles that move at constant speed in two dimensions

Francisco J. Sevilla and Luis A. Gómez Nava

Phys. Rev. E 90, 022130 (2014) - Published 25 August, 2014

Active Brownian particles: Entropy production and fluctuation response

Debasish Chaudhuri

Phys. Rev. E 90, 022131 (2014) - Published 25 August, 2014

Percolation and cooperation with mobile agents: Geometric and strategy clusters

Mendeli H. Vainstein, Carolina Brito, and Jeferson J. Arenzon

Phys. Rev. E 90, 022132 (2014) - Published 26 August, 2014

Statistical evaluation of forecasts

Malenka Mader, Wolfgang Mader, Bruce J. Gluckman, Jens Timmer, and Björn Schelter

Phys. Rev. E 90, 022133 (2014) - Published 26 August, 2014

Double-maximum enhancement of signal-to-noise ratio gain via stochastic resonance and vibrational resonance

Fabing Duan, François Chapeau-Blondeau, and Derek Abbott

Phys. Rev. E 90, 022134 (2014) - Published 26 August, 2014

Weiss mean-field approximation for multicomponent stochastic spatially extended systems

Svetlana E. Kurushina, Valerii V. Maximov, and Yurii M. Romanovskii

Phys. Rev. E 90, 022135 (2014) - Published 26 August, 2014

Memory-induced anomalous dynamics in a minimal random walk model

Upendra Harbola, Niraj Kumar, and Katja Lindenberg

Phys. Rev. E 90, 022136 (2014) - Published 27 August, 2014

Time-delayed coupled logistic capacity model in population dynamics

Manuel O. Cáceres

Phys. Rev. E 90, 022137 (2014) - Published 27 August, 2014

EDITORS' SUGGESTION

Jamming in finite systems: Stability, anisotropy, fluctuations, and scaling

Carl P. Goodrich, Simon Dagois-Bohy, Brian P. Tighe, Martin van Hecke, Andrea J. Liu, and Sidney R. Nagel

Phys. Rev. E 90, 022138 (2014) - Published 27 August, 2014

Enhanced efficiency of internal combustion engines by employing spinning gas

V. I. Geyko and N. J. Fisch

Phys. Rev. E 90, 022139 (2014) - Published 28 August, 2014

Erosion by a one-dimensional random walk

Rebecca H. Chisholm, Barry D. Hughes, and Kerry A. Landman

Phys. Rev. E 90, 022140 (2014) - Published 28 August, 2014

Percolation model for a selective response of the resistance of composite semiconducting $n p$ systems with respect to reducing gases

Stefanie Russ

Phys. Rev. E 90, 022141 (2014) - Published 28 August, 2014

Attenuation of excitation decay rate due to collective effect

B. A. Tay

Phys. Rev. E 90, 022142 (2014) - Published 29 August, 2014

Extracting work from a single heat bath: A case study of a Brownian particle under an external magnetic field in the presence of information

P. S. Pal, Shubhashis Rana, Arnab Saha, and A. M. Jayannavar

Phys. Rev. E 90, 022143 (2014) - Published 29 August, 2014

Benford's law gives better scaling exponents in phase transitions of quantum $X Y$ models

Ameya Deepak Rane, Utkarsh Mishra, Anindya Biswas, Aditi Sen(De), and Ujjwal Sen

Phys. Rev. E 90, 022144 (2014) - Published 29 August, 2014

Solution of the explosive percolation quest: Scaling functions and critical exponents

R. A. da Costa, S. N. Dorogovtsev, A. V. Goltsev, and J. F. F. Mendes

Phys. Rev. E 90, 022145 (2014) - Published 29 August, 2014

Granular Materials

Contact nonlinearities and linear response in jammed particulate packings

Carl P. Goodrich, Andrea J. Liu, and Sidney R. Nagel

Phys. Rev. E 90, 022201 (2014) - Published 4 August, 2014

Effect of cohesion on shear banding in quasistatic granular materials

Abhinendra Singh, Vanessa Magnanimo, Kuniyasu Saitoh, and Stefan Luding

Phys. Rev. E 90, 022202 (2014) - Published 6 August, 2014

EDITORS' SUGGESTION

Laboratory alluvial fans in one dimension

L. Guerit, F. Métivier, O. Devauchelle, E. Lajeunesse, and L. Barrier

Phys. Rev. E 90, 022203 (2014) - Published 13 August, 2014

Influence of particle size distribution on random close packing of spheres

Kenneth W. Desmond and Eric R. Weeks

Phys. Rev. E 90, 022204 (2014) - Published 22 August, 2014

Transport coefficients of a granular gas of inelastic rough hard spheres

Gilberto M. Kremer, Andrés Santos, and Vicente Garzó

Phys. Rev. E 90, 022205 (2014) - Published 27 August, 2014

Colloids and Complex Fluids

Clustering of low-valence particles: Structure and kinetics

Olga Markova, Jonathan Alberts, Edwin Munro, and Pierre-François Lenne

Phys. Rev. E 90, 022301 (2014) - Published 12 August, 2014

Shear modulus of glasses: Results from the full replica-symmetry-breaking solution

Hajime Yoshino and Francesco Zamponi

Phys. Rev. E 90, 022302 (2014) - Published 20 August, 2014

Activity-induced clustering in model dumbbell swimmers: The role of hydrodynamic interactions

Akira Furukawa, Davide Marenduzzo, and Michael E. Cates

Phys. Rev. E 90, 022303 (2014) - Published 25 August, 2014

Nonlinear elasticity of microsphere heaps

Carlos P. Ortiz, Karen E. Daniels, and Robert Riehn

Phys. Rev. E 90, 022304 (2014) - Published 26 August, 2014

Films, Interfaces, and Solids

Effects of surface wettability and liquid viscosity on the dynamic wetting of individual drops

Longquan Chen and Elmar Bonaccurso

Phys. Rev. E 90, 022401 (2014) - Published 4 August, 2014

Random packing of regular polygons and star polygons on a flat two-dimensional surface

Michał Cieśla and Jakub Barbasz

Phys. Rev. E 90, 022402 (2014) - Published 7 August, 2014

Solid-liquid surface tensions of critical nuclei and nucleation barriers from a phase-field-crystal study of a model binary alloy using finite system sizes

Muhammad Ajmal Choudhary, Julia Kundin, Heike Emmerich, and Martin Oettel

Phys. Rev. E 90, 022403 (2014) - Published 13 August, 2014

Island-dynamics model for mound formation: Effect of a step-edge barrier

Joe Papac, Dionisios Margetis, Frederic Gibou, and Christian Ratsch

Phys. Rev. E 90, 022404 (2014) - Published 14 August, 2014

Avalanches in compressed porous $Si O_{2}$ -based materials

Guillaume F. Nataf, Pedro O. Castillo-Villa, Jordi Baró, Xavier Illa, Eduard Vives, Antoni Planes, and Ekhard K. H. Salje

Phys. Rev. E 90, 022405 (2014) - Published 15 August, 2014

First-order and tricritical wetting transitions in the two-dimensional Ising model caused by interfacial pinning at a defect line

Marta L. Trobo, Ezequiel V. Albano, and Kurt Binder

Phys. Rev. E 90, 022406 (2014) - Published 18 August, 2014

Solid matrix partition by fracture networks

R. Rosenzweig, V. V. Mourzenko, J.-F. Thovert, and P. M. Adler

Phys. Rev. E 90, 022407 (2014) - Published 22 August, 2014

Liquid Crystals

Dielectric, electro-optical, and photoluminescence characteristics of ferroelectric liquid crystals on a graphene-coated indium tin oxide substrate

Dharmendra Pratap Singh, Swadesh Kumar Gupta, Tripti Vimal, and Rajiv Manohar

Phys. Rev. E 90, 022501 (2014) - Published 18 August, 2014

Temperature-dependent orientational ordering on a spherical surface modeled with a lattice spin model

Alan M. Luo, Stefan Wenk, and Patrick Ilg

Phys. Rev. E 90, 022502 (2014) - Published 18 August, 2014

Generation of vector beams with liquid crystal disclination lines

Miha Čančula, Miha Ravnik, and Slobodan Žumer

Phys. Rev. E 90, 022503 (2014) - Published 26 August, 2014

Zig-zag wall lattice in a nematic liquid crystal with an in-plane switching configuration

I. Andrade-Silva, M. G. Clerc, and V. Odent

Phys. Rev. E 90, 022504 (2014) - Published 26 August, 2014

Inhibited pattern formation by asymmetrical high-voltage excitation in nematic fluids

Péter Salamon, Nándor Éber, Balázs Fekete, and Ágnes Buka

Phys. Rev. E 90, 022505 (2014) - Published 27 August, 2014

Nematic order by thermal disorder in a three-dimensional lattice spin model with dipolarlike interactions

Hassan Chamati and Silvano Romano

Phys. Rev. E 90, 022506 (2014) - Published 27 August, 2014

Density-functional theory and Monte Carlo simulations of the phase behavior of a simple model liquid crystal

Stefano Giura and Martin Schoen

Phys. Rev. E 90, 022507 (2014) - Published 29 August, 2014

Polymers

Identifying transitions in finite systems by means of partition function zeros and microcanonical inflection-point analysis: A comparison for elastic flexible polymers

Julio C. S. Rocha, Stefan Schnabel, David P. Landau, and Michael Bachmann

Phys. Rev. E 90, 022601 (2014) - Published 4 August, 2014

Passive one-particle microrheology of an unentangled polymer melt studied by molecular dynamics simulation

A. Kuhnhold and W. Paul

Phys. Rev. E 90, 022602 (2014) - Published 5 August, 2014

Biological Physics

Threshold curve for the excitability of bidimensional spiking neurons

Arnaud Tonnelier

Phys. Rev. E 90, 022701 (2014) - Published 4 August, 2014

Effects of local $p H$ on the formation and regulation of cristae morphologies

Dong Hoon Song, Jonghyun Park, Martin A. Philbert, Ann Marie Sastry, and Wei Lu

Phys. Rev. E 90, 022702 (2014) - Published 5 August, 2014

Experimental detection of long-distance interactions between biomolecules through their diffusion behavior: Numerical study

Ilaria Nardecchia, Lionel Spinelli, Jordane Preto, Matteo Gori, Elena Floriani, Sebastien Jaeger, Pierre Ferrier, and Marco Pettini

Phys. Rev. E 90, 022703 (2014) - Published 6 August, 2014

RecA-mediated sequence homology recognition as an example of how searching speed in self-assembly systems can be optimized by balancing entropic and enthalpic barriers

Lili Jiang and Mara Prentiss

Phys. Rev. E 90, 022704 (2014) - Published 7 August, 2014

Electronic structure, stacking energy, partial charge, and hydrogen bonding in four periodic B-DNA models

Lokendra Poudel, Paul Rulis, Lei Liang, and W. Y. Ching

Phys. Rev. E 90, 022705 (2014) - Published 7 August, 2014

Dynamic scaling analysis of two-dimensional cell colony fronts in a gel medium: A biological system approaching a quenched Kardar-Parisi-Zhang universality

M. A. C. Huergo, N. E. Muzzio, M. A. Pasquale, P. H. Pedro González, A. E. Bolzán, and A. J. Arvia

Phys. Rev. E 90, 022706 (2014) - Published 11 August, 2014

Model for coupled insertion and folding of membrane-spanning proteins

Andrew C. Hausrath

Phys. Rev. E 90, 022707 (2014) - Published 11 August, 2014

Conformational change in cytochrome P450 reductase adsorbed at a Au(110)—phosphate buffer interface induced by interaction with nicotinamide adenine dinucleotide phosphate

C. I. Smith, J. H. Convery, P. Harrison, B. Khara, N. S. Scrutton, and P. Weightman

Phys. Rev. E 90, 022708 (2014) - Published 13 August, 2014

Deformation analysis of vesicles in an alternating-current electric field

Yu-Gang Tang, Ying Liu, and Xi-Qiao Feng

Phys. Rev. E 90, 022709 (2014) - Published 13 August, 2014

Catastrophic shifts and lethal thresholds in a propagating front model of unstable tumor progression

Daniel R. Amor and Ricard V. Solé

Phys. Rev. E 90, 022710 (2014) - Published 13 August, 2014

Dynamical mechanism of antifreeze proteins to prevent ice growth

B. Kutschan, K. Morawetz, and S. Thoms

Phys. Rev. E 90, 022711 (2014) - Published 13 August, 2014

Punctuated equilibrium and shock waves in molecular models of biological evolution

David B. Saakian, Makar H. Ghazaryan, and Chin-Kun Hu

Phys. Rev. E 90, 022712 (2014) - Published 15 August, 2014

Protein crowding on biomembranes: Analysis of contour instabilities

O. V. Manyuhina

Phys. Rev. E 90, 022713 (2014) - Published 19 August, 2014

Bayesian orientation estimate and structure information from sparse single-molecule x-ray diffraction images

Michał Walczak and Helmut Grubmüller

Phys. Rev. E 90, 022714 (2014) - Published 20 August, 2014

Robust design of polyrhythmic neural circuits

Justus T. C. Schwabedal, Alexander B. Neiman, and Andrey L. Shilnikov

Phys. Rev. E 90, 022715 (2014) - Published 22 August, 2014

Feedback, receptor clustering, and receptor restriction to single cells yield large Turing spaces for ligand-receptor-based Turing models

Tamás Kurics, Denis Menshykau, and Dagmar Iber

Phys. Rev. E 90, 022716 (2014) - Published 22 August, 2014

Defining the free-energy landscape of curvature-inducing proteins on membrane bilayers

Richard W. Tourdot, N. Ramakrishnan, and Ravi Radhakrishnan

Phys. Rev. E 90, 022717 (2014) - Published 25 August, 2014

Viruses as nanoparticles: Structure versus collective dynamics

S. Sirotkin, A. Mermet, M. Bergoin, V. Ward, and J. L. Van Etten

Phys. Rev. E 90, 022718 (2014) - Published 27 August, 2014

Prediction of allosteric sites on protein surfaces with an elastic-network-model-based thermodynamic method

Ji Guo Su, Li Sheng Qi, Chun Hua Li, Yan Ying Zhu, Hui Jing Du, Yan Xue Hou, Rui Hao, and Ji Hua Wang

Phys. Rev. E 90, 022719 (2014) - Published 27 August, 2014

Living bacteria rheology: Population growth, aggregation patterns, and collective behavior under different shear flows

P. Patrício, P. L. Almeida, R. Portela, R. G. Sobral, I. R. Grilo, T. Cidade, and C. R. Leal

Phys. Rev. E 90, 022720 (2014) - Published 28 August, 2014

Scale-free and economical features of functional connectivity in neuronal networks

Jean-Philippe Thivierge

Phys. Rev. E 90, 022721 (2014) - Published 29 August, 2014

Stochastic information transfer from cochlear implant electrodes to auditory nerve fibers

Xiao Gao, David B. Grayden, and Mark D. McDonnell

Phys. Rev. E 90, 022722 (2014) - Published 29 August, 2014

Local dynamics coupled to hydration water determines DNA-sequence-dependent deformability

H. Nakagawa, Y. Yonetani, K. Nakajima, S. Ohira-Kawamura, T. Kikuchi, Y. Inamura, M. Kataoka, and H. Kono

Phys. Rev. E 90, 022723 (2014) - Published 29 August, 2014

Networks and Interdisciplinary Physics

Effects of community structure on epidemic spread in an adaptive network

Ilker Tunc and Leah B. Shaw

Phys. Rev. E 90, 022801 (2014) - Published 4 August, 2014

Metabolic networks are almost nonfractal: A comprehensive evaluation

Kazuhiro Takemoto

Phys. Rev. E 90, 022802 (2014) - Published 4 August, 2014

Superlinear and sublinear urban scaling in geographical networks modeling cities

K. Yakubo, Y. Saijo, and D. Korošak

Phys. Rev. E 90, 022803 (2014) - Published 4 August, 2014

Time-series analysis of networks: Exploring the structure with random walks

Tongfeng Weng, Yi Zhao, Michael Small, and Defeng (David) Huang

Phys. Rev. E 90, 022804 (2014) - Published 8 August, 2014

Spreading of intolerance under economic stress: Results from a reputation-based model

Luis A. Martinez-Vaquero and José A. Cuesta

Phys. Rev. E 90, 022805 (2014) - Published 11 August, 2014

EDITORS' SUGGESTION

Complex architecture of primes and natural numbers

Guillermo García-Pérez, M. Ángeles Serrano, and Marián Boguñá

Phys. Rev. E 90, 022806 (2014) - Published 12 August, 2014

Potential global jamming transition in aviation networks

Takahiro Ezaki and Katsuhiro Nishinari

Phys. Rev. E 90, 022807 (2014) - Published 15 August, 2014

Dynamical immunization strategy for seasonal epidemics

Shu Yan, Shaoting Tang, Sen Pei, Shijin Jiang, and Zhiming Zheng

Phys. Rev. E 90, 022808 (2014) - Published 19 August, 2014

Generalized friendship paradox in networks with tunable degree-attribute correlation

Hang-Hyun Jo and Young-Ho Eom

Phys. Rev. E 90, 022809 (2014) - Published 21 August, 2014

Social imitation versus strategic choice, or consensus versus cooperation, in the networked Prisoner's Dilemma

Daniele Vilone, José J. Ramasco, Angel Sánchez, and Maxi San Miguel

Phys. Rev. E 90, 022810 (2014) - Published 22 August, 2014

Heterogeneous mean field for neural networks with short-term plasticity

Matteo di Volo, Raffaella Burioni, Mario Casartelli, Roberto Livi, and Alessandro Vezzani

Phys. Rev. E 90, 022811 (2014) - Published 25 August, 2014

Synchronization in time-varying networks

Vivek Kohar, Peng Ji, Anshul Choudhary, Sudeshna Sinha, and Jüergen Kurths

Phys. Rev. E 90, 022812 (2014) - Published 25 August, 2014

Temporal stability of network partitions

Giovanni Petri and Paul Expert

Phys. Rev. E 90, 022813 (2014) - Published 25 August, 2014

Stability of Boolean networks: The joint effects of topology and update rules

Shane Squires, Andrew Pomerance, Michelle Girvan, and Edward Ott

Phys. Rev. E 90, 022814 (2014) - Published 25 August, 2014

Boolean networks with veto functions

Haleh Ebadi and Konstantin Klemm

Phys. Rev. E 90, 022815 (2014) - Published 26 August, 2014

Full eigenvalues of the Markov matrix for scale-free polymer networks

Zhongzhi Zhang, Xiaoye Guo, and Yuan Lin

Phys. Rev. E 90, 022816 (2014) - Published 26 August, 2014

Preferential attachment in multiple trade networks

Rachele Foschi, Massimo Riccaboni, and Stefano Schiavo

Phys. Rev. E 90, 022817 (2014) - Published 27 August, 2014

Disorder-enhanced exciton delocalization in an extended dendrimer

Vincent Pouthier

Phys. Rev. E 90, 022818 (2014) - Published 28 August, 2014

Nonlinear Dynamics and Chaos

Nonreciprocal transmission through a saturable nonlinear asymmetric dimer

T. F. Assunção, E. M. Nascimento, and M. L. Lyra

Phys. Rev. E 90, 022901 (2014) - Published 4 August, 2014

Generalized dark-bright vector soliton solution to the mixed coupled nonlinear Schrödinger equations

N. Manikandan, R. Radhakrishnan, and K. Aravinthan

Phys. Rev. E 90, 022902 (2014) - Published 5 August, 2014

EDITORS' SUGGESTION

Spectral properties and dynamical tunneling in constant-width billiards

B. Dietz, T. Guhr, B. Gutkin, M. Miski-Oglu, and A. Richter

Phys. Rev. E 90, 022903 (2014) - Published 7 August, 2014

Spatial forcing of pattern-forming systems that lack inversion symmetry

Lev Haim, Yair Mau, and Ehud Meron

Phys. Rev. E 90, 022904 (2014) - Published 8 August, 2014

Characterizing traveling-wave collisions in granular chains starting from integrable limits: The case of the Korteweg–de Vries equation and the Toda lattice

Y. Shen, P. G. Kevrekidis, S. Sen, and A. Hoffman

Phys. Rev. E 90, 022905 (2014) - Published 11 August, 2014

Asymptotic observability of low-dimensional powder chaos in a three-degrees-of-freedom scattering system

Gábor Drótos, Francisco González Montoya, Christof Jung, and Tamás Tél

Phys. Rev. E 90, 022906 (2014) - Published 12 August, 2014

Nonlinearity effects on the directed momentum current

Wen-Lei Zhao, Li-Bin Fu, and Jie Liu

Phys. Rev. E 90, 022907 (2014) - Published 14 August, 2014

Control mechanisms for the global structure of scalar dispersion in chaotic flows

Daniel Lester, Guy Metcalfe, and Murray Rudman

Phys. Rev. E 90, 022908 (2014) - Published 14 August, 2014

Achieving modulated oscillations by feedback control

Tian Ge, Xiaoying Tian, Jürgen Kurths, Jianfeng Feng, and Wei Lin

Phys. Rev. E 90, 022909 (2014) - Published 14 August, 2014

Signatures of chaos in time series generated by many-spin systems at high temperatures

Tarek A. Elsayed, Benjamin Hess, and Boris V. Fine

Phys. Rev. E 90, 022910 (2014) - Published 20 August, 2014

Bifurcation study of phase oscillator systems with attractive and repulsive interaction

Oleksandr Burylko, Yakov Kazanovich, and Roman Borisyuk

Phys. Rev. E 90, 022911 (2014) - Published 25 August, 2014

Nonlinear waves in networks: Model reduction for the sine-Gordon equation

Jean-Guy Caputo and Denys Dutykh

Phys. Rev. E 90, 022912 (2014) - Published 25 August, 2014

Non-Hamiltonian features of a classical pilot-wave dynamics

M. Labousse and S. Perrard

Phys. Rev. E 90, 022913 (2014) - Published 26 August, 2014

Nondeterministic dynamics of a mechanical system

Robert Szalai and Mike R. Jeffrey

Phys. Rev. E 90, 022914 (2014) - Published 26 August, 2014

Stripe patterns: Role of initial state and boundary conditions

Ashwani K. Tripathi and Deepak Kumar

Phys. Rev. E 90, 022915 (2014) - Published 26 August, 2014

Unpinning of scroll waves under the influence of a thermal gradient

Nirmali Prabha Das, Dhriti Mahanta, and Sumana Dutta

Phys. Rev. E 90, 022916 (2014) - Published 26 August, 2014

Route to extreme events in excitable systems

Rajat Karnatak, Gerrit Ansmann, Ulrike Feudel, and Klaus Lehnertz

Phys. Rev. E 90, 022917 (2014) - Published 27 August, 2014

Rogue-wave pattern transition induced by relative frequency

Li-Chen Zhao, Guo-Guo Xin, and Zhan-Ying Yang

Phys. Rev. E 90, 022918 (2014) - Published 28 August, 2014

Multicluster and traveling chimera states in nonlocal phase-coupled oscillators

Jianbo Xie, Edgar Knobloch, and Hsien-Ching Kao

Phys. Rev. E 90, 022919 (2014) - Published 29 August, 2014

Exploring chaos in the Dicke model using ground-state fidelity and Loschmidt echo

Utso Bhattacharya, Sayak Dasgupta, and Amit Dutta

Phys. Rev. E 90, 022920 (2014) - Published 29 August, 2014

Quantum and classical superballistic transport in a relativistic kicked-rotor system

Qifang Zhao, Cord A. Müller, and Jiangbin Gong

Phys. Rev. E 90, 022921 (2014) - Published 29 August, 2014

Fluid Dynamics

Photoacoustic radiation force on a microbubble

Hakan Erkol, Esra Aytac-Kipergil, and Mehmet Burcin Unlu

Phys. Rev. E 90, 023001 (2014) - Published 5 August, 2014

Vorticity generation by the instantaneous release of energy near a reflective boundary

P. Moresco, T. E. Harris, and V. Jodoin

Phys. Rev. E 90, 023002 (2014) - Published 8 August, 2014

Origin of the imbalance between energy cascade and dissipation in turbulence

P. C. Valente, R. Onishi, and C. B. da Silva

Phys. Rev. E 90, 023003 (2014) - Published 8 August, 2014

Lattice Boltzmann simulation for forced two-dimensional turbulence

YuXian Xia and YueHong Qian

Phys. Rev. E 90, 023004 (2014) - Published 11 August, 2014

Dimensional transition in rotating turbulence

E. Deusebio, G. Boffetta, E. Lindborg, and S. Musacchio

Phys. Rev. E 90, 023005 (2014) - Published 13 August, 2014

Influence of the elastic deformation of a foam on its mobility in channels of linearly varying width

Benjamin Dollet, Siân A. Jones, Yves Méheust, and Isabelle Cantat

Phys. Rev. E 90, 023006 (2014) - Published 13 August, 2014

Stability analysis of a thin liquid film on an axially oscillating cylindrical surface in the high-frequency limit

Selin Duruk and Alexander Oron

Phys. Rev. E 90, 023007 (2014) - Published 13 August, 2014

Optimal translational swimming of a sphere at low Reynolds number

B. U. Felderhof and R. B. Jones

Phys. Rev. E 90, 023008 (2014) - Published 18 August, 2014

EDITORS' SUGGESTION

Mach-like capillary-gravity wakes

Frédéric Moisy and Marc Rabaud

Phys. Rev. E 90, 023009 (2014) - Published 18 August, 2014

Non-Darcy behavior of two-phase channel flow

Xianmin Xu and Xiaoping Wang

Phys. Rev. E 90, 023010 (2014) - Published 19 August, 2014

Thermocapillary-actuated contact-line motion of immiscible binary fluids over substrates with patterned wettability in narrow confinement

Debabrata DasGupta, Pranab Kumar Mondal, and Suman Chakraborty

Phys. Rev. E 90, 023011 (2014) - Published 20 August, 2014

Inertial-range dynamics and scaling laws of two-dimensional magnetohydrodynamic turbulence in the weak-field regime

Luke A. K. Blackbourn and Chuong V. Tran

Phys. Rev. E 90, 023012 (2014) - Published 21 August, 2014

Statistical scaling of pore-scale Lagrangian velocities in natural porous media

M. Siena, A. Guadagnini, M. Riva, B. Bijeljic, J. P. Pereira Nunes, and M. J. Blunt

Phys. Rev. E 90, 023013 (2014) - Published 21 August, 2014

Natural convection of a two-dimensional Boussinesq fluid does not maximize entropy production

Stuart Bartlett and Seth Bullock

Phys. Rev. E 90, 023014 (2014) - Published 21 August, 2014

Natural convection in a fluid layer periodically heated from above

M. Z. Hossain and J. M. Floryan

Phys. Rev. E 90, 023015 (2014) - Published 25 August, 2014

Energy spectrum of buoyancy-driven turbulence

Abhishek Kumar, Anando G. Chatterjee, and Mahendra K. Verma

Phys. Rev. E 90, 023016 (2014) - Published 25 August, 2014

Formation of crownlike and related nanostructures on thin supported gold films irradiated by single diffraction-limited nanosecond laser pulses

Yu. N. Kulchin, O. B. Vitrik, A. A. Kuchmizhak, V. I. Emel'yanov, A. A. Ionin, S. I. Kudryashov, and S. V. Makarov

Phys. Rev. E 90, 023017 (2014) - Published 26 August, 2014

Large-scale anisotropy in stably stratified rotating flows

R. Marino, P. D. Mininni, D. L. Rosenberg, and A. Pouquet

Phys. Rev. E 90, 023018 (2014) - Published 28 August, 2014

Inertial forces affect fluid front displacement dynamics in a pore-throat network model

Franziska Moebius and Dani Or

Phys. Rev. E 90, 023019 (2014) - Published 28 August, 2014

Plasma Physics

Suppression of transverse ablative Rayleigh-Taylor-like instability in the hole-boring radiation pressure acceleration by using elliptically polarized laser pulses

D. Wu, C. Y. Zheng, B. Qiao, C. T. Zhou, X. Q. Yan, M. Y. Yu, and X. T. He

Phys. Rev. E 90, 023101 (2014) - Published 11 August, 2014

Classical Physics

Stationary solutions for the $2 + 1$ nonlinear Schrödinger equation modeling Bose-Einstein condensates in radial potentials

Kristina Mallory and Robert A. Van Gorder

Phys. Rev. E 90, 023201 (2014) - Published 1 August, 2014

Trapping of diffusive particles by rough absorbing surfaces: Boundary smoothing approach

A. Skvortsov and A. Walker

Phys. Rev. E 90, 023202 (2014) - Published 15 August, 2014

Numerical integration of the stochastic Landau-Lifshitz-Gilbert equation in generic time-discretization schemes

Federico Romá, Leticia F. Cugliandolo, and Gustavo S. Lozano

Phys. Rev. E 90, 023203 (2014) - Published 22 August, 2014

Dynamics of periodic mechanical structures containing bistable elastic elements: From elastic to solitary wave propagation

Neel Nadkarni, Chiara Daraio, and Dennis M. Kochmann

Phys. Rev. E 90, 023204 (2014) - Published 22 August, 2014

COMMENTS

Comment on “Vortex distribution in a confining potential”

Mauricio S. Ribeiro, Fernando D. Nobre, and Evaldo M. F. Curado

Phys. Rev. E 90, 026101 (2014) - Published 28 August, 2014

Reply to “Comment on ‘Vortex distribution in a confining potential’ ”

Matheus Girotto, Alexandre P. dos Santos, Renato Pakter, and Yan Levin

Phys. Rev. E 90, 026102 (2014) - Published 28 August, 2014

ERRATA

Publisher's Note: Nonequilibrium steady states in a model for prebiotic evolution [Phys. Rev. E 89, 022725 (2014)]

A. Wynveen, I. Fedorov, and J. W. Halley

Phys. Rev. E 90, 029901 (2014) - Published 6 August, 2014

Publisher's Note: Electronic structure, stacking energy, partial charge, and hydrogen bonding in four periodic B-DNA models [Phys. Rev. E 90, 022705 (2014)]

Lokendra Poudel, Paul Rulis, Lei Liang, and W. Y. Ching

Phys. Rev. E 90, 029902 (2014) - Published 15 August, 2014

Erratum: Anisotropic diffusive transport: Connecting microscopic scattering and macroscopic transport properties [Phys. Rev. E 89, 063202 (2014)]

Erik Alerstam

Phys. Rev. E 90, 029903 (2014) - Published 21 August, 2014

Publisher's Note: Avalanches in compressed porous $Si O_{2}$ -based materials [Phys. Rev. E 90, 022405 (2014)]

Guillaume F. Nataf, Pedro O. Castillo-Villa, Jordi Baró, Xavier Illa, Eduard Vives, Antoni Planes, and Ekhard K. H. Salje

Phys. Rev. E 90, 029904 (2014) - Published 26 August, 2014