Volume 89, Issue 3

March 2014

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HIGHLIGHTED ARTICLES

FEATURED IN PHYSICS

EDITORS' SUGGESTION

Gas flow in plant microfluidic networks controlled by capillary valves

M. Capron, Ph. Tordjeman, F. Charru, E. Badel, and H. Cochard

Phys. Rev. E 89, 033019 (2014) - Published 28 March, 2014

The authors use microfluidic experiments and imaging techniques to study the mechanism of air flow in the vascular tissue of plants. They conclude that the air diffusion is controlled by capillary valves which open at a critical pressure, a result that is important both for the understanding of plant physiology and for possible application in biomimetic devices.

EDITORS' SUGGESTION

RAPID COMMUNICATION

Transition in coupled replicas may not imply a finite-temperature ideal glass transition in glass-forming systems

Juan P. Garrahan

Phys. Rev. E 89, 030301(R) (2014) - Published 3 March, 2014

A key open question in the glass-transition field is whether a finite temperature thermodynamic transition to the glass state exists or not. This work shows that, in contrast to recent evidence, an observed transition in coupled replicas does not necessarily indicate a finite-temperature ideal-glass transition in glass-forming systems.

EDITORS' SUGGESTION

RAPID COMMUNICATION

Quantifying the effects of neglecting many-body interactions in coarse-grained models of complex fluids

Douglas J. Ashton and Nigel B. Wilding

Phys. Rev. E 89, 031301(R) (2014) - Published 10 March, 2014

The authors describe a simulation scheme for assessing the consequences of neglecting many-body effects in coarse-grained models of complex fluids. Through a simple method that can directly estimate the virial coefficients of a complex fluid the role of many-body effects can be quantified.

EDITORS' SUGGESTION

Pros and cons of swimming in a noisy environment

Piero Olla

Phys. Rev. E 89, 032136 (2014) - Published 28 March, 2014

The author studies a simplified model of a microscopic swimmer in a noisy environment. It is shown that the presence of noise can increase the swimmer’s efficiency, and overcome some of the limitations of the scallop theorem, which says that swimming by reciprocal motion is impossible at low Reynolds number.

EDITORS' SUGGESTION

Coarsening modes of clusters of aggregating particles

Andrey Pototsky, Uwe Thiele, and Andrew J. Archer

Phys. Rev. E 89, 032144 (2014) - Published 31 March, 2014

In coarsening dynamics, clusters can grow and coalesce by diffusion of individual particles in the Ostwald ripening process, or by means of cluster motion and merging. Using dynamical density functional theory the authors study the aggregation kinetics of clusters of attracting hard particles and the interplay between the two coalescence processes.

EDITORS' SUGGESTION

Inferring the spatiotemporal DNA replication program from noisy data

A. Baker and J. Bechhoefer

Phys. Rev. E 89, 032703 (2014) - Published 6 March, 2014

Based on a stochastic model of DNA replication this work studies the problem of inferring replication rates from experimental data. Using a Bayesian, nonparametric inference method the authors recover simulated replication schemes from noisy data that are typical of current experiments.

RAPID COMMUNICATIONS

Statistical Physics

RAPID COMMUNICATION

Oscillatory decay of the survival probability of activated diffusion across a limit cycle

K. Dao Duc, Z. Schuss, and D. Holcman

Phys. Rev. E 89, 030101(R) (2014) - Published 7 March, 2014

RAPID COMMUNICATION

Anomalous diffusion in nonhomogeneous media: Time-subordinated Langevin equation approach

Tomasz Srokowski

Phys. Rev. E 89, 030102(R) (2014) - Published 31 March, 2014

RAPID COMMUNICATION

Exit probability in inflow dynamics: Nonuniversality induced by range, asymmetry, and fluctuation

Parna Roy, Soham Biswas, and Parongama Sen

Phys. Rev. E 89, 030103(R) (2014) - Published 31 March, 2014

Colloids and Complex Fluids

EDITORS' SUGGESTION

RAPID COMMUNICATION

Transition in coupled replicas may not imply a finite-temperature ideal glass transition in glass-forming systems

Juan P. Garrahan

Phys. Rev. E 89, 030301(R) (2014) - Published 3 March, 2014

Liquid Crystals

RAPID COMMUNICATION

Flexoelectricity in chiral nematic liquid crystals as a driving mechanism for the twist-bend and splay-bend modulated phases

Nataša Vaupotič, Mojca Čepič, Mikhail A. Osipov, and Ewa Gorecka

Phys. Rev. E 89, 030501(R) (2014) - Published 26 March, 2014

Polymers

RAPID COMMUNICATION

Collaborative effects in polymer translocation and the appearance of fictitious free-energy barriers

D. P. Foster and F. Piguet

Phys. Rev. E 89, 030601(R) (2014) - Published 28 March, 2014

Biological Physics

RAPID COMMUNICATION

Hub-activated signal transmission in complex networks

Sven Jahnke, Raoul-Martin Memmesheimer, and Marc Timme

Phys. Rev. E 89, 030701(R) (2014) - Published 10 March, 2014

RAPID COMMUNICATION

Phenotypically heterogeneous populations in spatially heterogeneous environments

Pintu Patra and Stefan Klumpp

Phys. Rev. E 89, 030702(R) (2014) - Published 12 March, 2014

Plasma Physics

RAPID COMMUNICATION

Three-dimensional fast magnetic reconnection driven by relativistic ultraintense femtosecond lasers

Y. L. Ping, J. Y. Zhong, Z. M. Sheng, X. G. Wang, B. Liu, Y. T. Li, X. Q. Yan, X. T. He, J. Zhang, and G. Zhao

Phys. Rev. E 89, 031101(R) (2014) - Published 7 March, 2014

Classical Physics

RAPID COMMUNICATION

Ultrasound-modulated bioluminescence tomography

Guillaume Bal and John C. Schotland

Phys. Rev. E 89, 031201(R) (2014) - Published 13 March, 2014

Computational Physics

EDITORS' SUGGESTION

RAPID COMMUNICATION

Quantifying the effects of neglecting many-body interactions in coarse-grained models of complex fluids

Douglas J. Ashton and Nigel B. Wilding

Phys. Rev. E 89, 031301(R) (2014) - Published 10 March, 2014

ARTICLES

Statistical Physics

Universality and nonuniversality of mobility in heterogeneous single-file systems and Rouse chains

Michael A. Lomholt and Tobias Ambjörnsson

Phys. Rev. E 89, 032101 (2014) - Published 3 March, 2014

Thermal conductivity of molecular chains with asymmetric potentials of pair interactions

Alexander V. Savin and Yuriy A. Kosevich

Phys. Rev. E 89, 032102 (2014) - Published 4 March, 2014

Space-filling percolation

Abhijit Chakraborty and S. S. Manna

Phys. Rev. E 89, 032103 (2014) - Published 7 March, 2014

Roles of dry friction in the fluctuating motion of an adiabatic piston

Tomohiko G. Sano and Hisao Hayakawa

Phys. Rev. E 89, 032104 (2014) - Published 7 March, 2014

Griffiths phase and critical behavior of the two-dimensional Potts models with long-range correlated disorder

Christophe Chatelain

Phys. Rev. E 89, 032105 (2014) - Published 10 March, 2014

Weak commutation relations and eigenvalue statistics for products of rectangular random matrices

Jesper R. Ipsen and Mario Kieburg

Phys. Rev. E 89, 032106 (2014) - Published 10 March, 2014

Dissipation, interaction, and relative entropy

B. Gaveau, L. Granger, M. Moreau, and L. S. Schulman

Phys. Rev. E 89, 032107 (2014) - Published 10 March, 2014

Distribution of dynamical quantities in the contact process, random walks, and quantum spin chains in random environments

Róbert Juhász

Phys. Rev. E 89, 032108 (2014) - Published 10 March, 2014

Rare-event trajectory ensemble analysis reveals metastable dynamical phases in lattice proteins

Antonia S. J. S. Mey, Phillip L. Geissler, and Juan P. Garrahan

Phys. Rev. E 89, 032109 (2014) - Published 11 March, 2014

Critical behavior of a relativistic Bose gas

P. N. Pandita

Phys. Rev. E 89, 032110 (2014) - Published 11 March, 2014

Static and dynamical properties of a hard-disk fluid confined to a narrow channel

M. J. Godfrey and M. A. Moore

Phys. Rev. E 89, 032111 (2014) - Published 12 March, 2014

Improved predictions of rare events using the Crooks fluctuation theorem

Julia Gundermann, Stefan Siegert, and Holger Kantz

Phys. Rev. E 89, 032112 (2014) - Published 12 March, 2014

Crossover behavior of conductivity in a discontinuous percolation model

Seongmin Kim, Y. S. Cho, N. A. M. Araújo, and B. Kahng

Phys. Rev. E 89, 032113 (2014) - Published 12 March, 2014

Quantum fluctuation theorems and generalized measurements during the force protocol

Gentaro Watanabe, B. Prasanna Venkatesh, Peter Talkner, Michele Campisi, and Peter Hänggi

Phys. Rev. E 89, 032114 (2014) - Published 12 March, 2014

Entanglement enhances cooling in microscopic quantum refrigerators

Nicolas Brunner, Marcus Huber, Noah Linden, Sandu Popescu, Ralph Silva, and Paul Skrzypczyk

Phys. Rev. E 89, 032115 (2014) - Published 13 March, 2014

Dynamics and physical interpretation of quasistationary states in systems with long-range interactions

T. M. Rocha Filho, M. A. Amato, A. E. Santana, A. Figueiredo, and J. R. Steiner

Phys. Rev. E 89, 032116 (2014) - Published 13 March, 2014

Relaxation of the thermal Casimir force between net neutral plates containing Brownian charges

David S. Dean and Rudolf Podgornik

Phys. Rev. E 89, 032117 (2014) - Published 14 March, 2014

High-resolution Monte Carlo study of the multicritical point in the three-dimensional $X X Z$ Heisenberg antiferromagnet

Siyan Hu, Shan-Ho Tsai, and D. P. Landau

Phys. Rev. E 89, 032118 (2014) - Published 17 March, 2014

Green-Kubo relation for friction at liquid-solid interfaces

Kai Huang and Izabela Szlufarska

Phys. Rev. E 89, 032119 (2014) - Published 18 March, 2014

Complexity and instability of quantum motion near a quantum phase transition

Pinquan Qin, Wen-ge Wang, Giuliano Benenti, and Giulio Casati

Phys. Rev. E 89, 032120 (2014) - Published 19 March, 2014

Composition distributions of particles in a gelling mixture

A. A. Lushnikov

Phys. Rev. E 89, 032121 (2014) - Published 19 March, 2014

Bending rigidity and higher-order curvature terms for the hard-sphere fluid near a curved wall

Ignacio Urrutia

Phys. Rev. E 89, 032122 (2014) - Published 19 March, 2014

Solution of the antiferromagnetic Ising model on a tetrahedron recursive lattice

E. Jurčišinová and M. Jurčišin

Phys. Rev. E 89, 032123 (2014) - Published 20 March, 2014

Scaling of temperature dependence of charge mobility in molecular Holstein chains

D. A. Tikhonov, N. S. Fialko, E. V. Sobolev, and V. D. Lakhno

Phys. Rev. E 89, 032124 (2014) - Published 20 March, 2014

Asymmetric simple exclusion process on chains with a shortcut

Nadezhda Bunzarova, Nina Pesheva, and Jordan Brankov

Phys. Rev. E 89, 032125 (2014) - Published 21 March, 2014

Dynamic transition of supercritical hydrogen: Defining the boundary between interior and atmosphere in gas giants

K. Trachenko, V. V. Brazhkin, and D. Bolmatov

Phys. Rev. E 89, 032126 (2014) - Published 21 March, 2014

Spatial correlation functions and dynamical exponents in very large samples of four-dimensional spin glasses

Lucas Nicolao, Giorgio Parisi, and Federico Ricci-Tersenghi

Phys. Rev. E 89, 032127 (2014) - Published 24 March, 2014

Satisfiability-unsatisfiability transition in the adversarial satisfiability problem

Marco Bardoscia, Daniel Nagaj, and Antonello Scardicchio

Phys. Rev. E 89, 032128 (2014) - Published 24 March, 2014

Temperature chaos and quenched heterogeneities

Paolo Barucca, Giorgio Parisi, and Tommaso Rizzo

Phys. Rev. E 89, 032129 (2014) - Published 24 March, 2014

Entropic memory erasure

Moupriya Das

Phys. Rev. E 89, 032130 (2014) - Published 25 March, 2014

Non-mean-field critical exponent in a mean-field model: Dynamics versus statistical mechanics

Shun Ogawa, Aurelio Patelli, and Yoshiyuki Y. Yamaguchi

Phys. Rev. E 89, 032131 (2014) - Published 25 March, 2014

Ensemble renormalization group for the random-field hierarchical model

Aurélien Decelle, Giorgio Parisi, and Jacopo Rocchi

Phys. Rev. E 89, 032132 (2014) - Published 26 March, 2014

Globally synchronized oscillations in complex cyclic games

Charlotte Rulquin and Jeferson J. Arenzon

Phys. Rev. E 89, 032133 (2014) - Published 27 March, 2014

Inconsistencies in steady-state thermodynamics

Ronald Dickman and Ricardo Motai

Phys. Rev. E 89, 032134 (2014) - Published 27 March, 2014

EDITORS' SUGGESTION

Pros and cons of swimming in a noisy environment

Piero Olla

Phys. Rev. E 89, 032136 (2014) - Published 28 March, 2014

Stochastic resonance in the two-dimensional $q$ -state clock models

Hye Jin Park, Seung Ki Baek, and Beom Jun Kim

Phys. Rev. E 89, 032137 (2014) - Published 31 March, 2014

Event-triggered feedback in noise-driven phase oscillators

Justus A. Kromer, Benjamin Lindner, and Lutz Schimansky-Geier

Phys. Rev. E 89, 032138 (2014) - Published 31 March, 2014

Random transitions described by the stochastic Smoluchowski-Poisson system and by the stochastic Keller-Segel model

P. H. Chavanis and L. Delfini

Phys. Rev. E 89, 032139 (2014) - Published 31 March, 2014

Dynamical transition in the $D = 3$ Edwards-Anderson spin glass in an external magnetic field

M. Baity-Jesi, R. A. Baños, A. Cruz, L. A. Fernandez, J. M. Gil-Narvion, A. Gordillo-Guerrero, D. Iñiguez, A. Maiorano, F. Mantovani, E. Marinari, V. Martin-Mayor, J. Monforte-Garcia, A. Muñoz Sudupe, D. Navarro, G. Parisi, S. Perez-Gaviro, M. Pivanti, F. Ricci-Tersenghi, J. J. Ruiz-Lorenzo, S. F. Schifano, B. Seoane, A. Tarancon, R. Tripiccione, and D. Yllanes (Janus Collaboration)

Phys. Rev. E 89, 032140 (2014) - Published 31 March, 2014

Fast-mode elimination in stochastic metapopulation models

George W. A. Constable and Alan J. McKane

Phys. Rev. E 89, 032141 (2014) - Published 31 March, 2014

Information pathways in a disordered lattice

Lawrence R. Frank and Vitaly L. Galinsky

Phys. Rev. E 89, 032142 (2014) - Published 31 March, 2014

Critical behavior of a quantum chain with four-spin interactions in the presence of longitudinal and transverse magnetic fields

B. Boechat, J. Florencio, A. Saguia, and O. F. de Alcantara Bonfim

Phys. Rev. E 89, 032143 (2014) - Published 31 March, 2014

EDITORS' SUGGESTION

Coarsening modes of clusters of aggregating particles

Andrey Pototsky, Uwe Thiele, and Andrew J. Archer

Phys. Rev. E 89, 032144 (2014) - Published 31 March, 2014

Classical scattering in strongly attractive potentials

S. A. Khrapak

Phys. Rev. E 89, 032145 (2014) - Published 31 March, 2014

Aging of the ( $2 + 1$ )-dimensional Kardar-Parisi-Zhang model

Géza Ódor, Jeffrey Kelling, and Sibylle Gemming

Phys. Rev. E 89, 032146 (2014) - Published 31 March, 2014

Lattice statistical theory of random walks on a fractal-like geometry

John J. Kozak, Roberto A. Garza-López, and Enrique Abad

Phys. Rev. E 89, 032147 (2014) - Published 31 March, 2014

Nonequilibrium entropic temperature and its lower bound for quantum stochastic processes

Somrita Ray, Alendu Baura, and Bidhan Chandra Bag

Phys. Rev. E 89, 032148 (2014) - Published 31 March, 2014

Granular Materials

Experimental investigation into the impact of a liquid droplet onto a granular bed using three-dimensional, time-resolved, particle tracking

Edward J. Long, Graham K. Hargrave, James R. Cooper, Ben G. B. Kitchener, Anthony J. Parsons, Caspar J. M. Hewett, and John Wainwright

Phys. Rev. E 89, 032201 (2014) - Published 3 March, 2014

Structural evolution in the packing of uniform spheres

Z. A. Tian, K. J. Dong, and A. B. Yu

Phys. Rev. E 89, 032202 (2014) - Published 5 March, 2014

Strain-rate-dependent model for the dynamic compression of elastoplastic spheres

Hayden A. Burgoyne and Chiara Daraio

Phys. Rev. E 89, 032203 (2014) - Published 12 March, 2014

Jamming by shape in kinetically constrained models

Eial Teomy and Yair Shokef

Phys. Rev. E 89, 032204 (2014) - Published 14 March, 2014

Mesoscale and macroscale kinetic energy fluxes from granular fabric evolution

David M. Walker, Antoinette Tordesillas, and Gary Froyland

Phys. Rev. E 89, 032205 (2014) - Published 21 March, 2014

Colloids and Complex Fluids

Role of surface in apparent viscosity of glasses

I. Avramov

Phys. Rev. E 89, 032301 (2014) - Published 3 March, 2014

Nonlinear oscillations in an electrolyte solution under ac voltage

Ory Schnitzer and Ehud Yariv

Phys. Rev. E 89, 032302 (2014) - Published 7 March, 2014

Correction of the power law of ac conductivity in ion-conducting materials due to the electrode polarization effect

A. A. Khamzin, I. I. Popov, and R. R. Nigmatullin

Phys. Rev. E 89, 032303 (2014) - Published 10 March, 2014

Small-angle neutron scattering study of differences in phase behavior of silica nanoparticles in the presence of lysozyme and bovine serum albumin proteins

Indresh Yadav, Sugam Kumar, V. K. Aswal, and J. Kohlbrecher

Phys. Rev. E 89, 032304 (2014) - Published 10 March, 2014

Correlation potential of a test ion near a strongly charged plate

Bing-Sui Lu and Xiangjun Xing

Phys. Rev. E 89, 032305 (2014) - Published 13 March, 2014

Single-file and normal diffusion of magnetic colloids in modulated channels

D. Lucena, J. E. Galván-Moya, W. P. Ferreira, and F. M. Peeters

Phys. Rev. E 89, 032306 (2014) - Published 13 March, 2014

Nonequilibrium noise in electrophoresis: The microion wind

Suropriya Saha and Sriram Ramaswamy

Phys. Rev. E 89, 032307 (2014) - Published 21 March, 2014

Thermodiffusion in positively charged magnetic colloids: Influence of the particle diameter

A. L. Sehnem, R. Aquino, A. F. C. Campos, F. A. Tourinho, J. Depeyrot, and A. M. Figueiredo Neto

Phys. Rev. E 89, 032308 (2014) - Published 24 March, 2014

Magnetic particles confined in a modulated channel: Structural transitions tunable by tilting a magnetic field

J. E. Galván-Moya, D. Lucena, W. P. Ferreira, and F. M. Peeters

Phys. Rev. E 89, 032309 (2014) - Published 31 March, 2014

Behavior of nanoparticle clouds around a magnetized microsphere under magnetic and flow fields

C. Magnet, P. Kuzhir, G. Bossis, A. Meunier, S. Nave, A. Zubarev, C. Lomenech, and V. Bashtovoi

Phys. Rev. E 89, 032310 (2014) - Published 31 March, 2014

Films, Interfaces, and Solids

Effect of charge regulation on the stability of electrolyte films

Christiaan Ketelaar and Vladimir S. Ajaev

Phys. Rev. E 89, 032401 (2014) - Published 10 March, 2014

Random walk on lattices: Graph-theoretic approach to simulating long-range diffusion-attachment growth models

Surachate Limkumnerd

Phys. Rev. E 89, 032402 (2014) - Published 11 March, 2014

Coexistence of spinodal instability and thermal nucleation in thin-film rupture: Insights from molecular levels

Trung Dac Nguyen, Miguel Fuentes-Cabrera, Jason D. Fowlkes, and Philip D. Rack

Phys. Rev. E 89, 032403 (2014) - Published 14 March, 2014

Temperature distribution along the surface of evaporating droplets

Kai Zhang, Liran Ma, Xuefeng Xu, Jianbin Luo, and Dan Guo

Phys. Rev. E 89, 032404 (2014) - Published 17 March, 2014

Scaling properties of planar discrete Poisson-Voronoi tessellations with von Neumann neighborhoods constructed according to the nucleation and growth mechanism

A. Korobov

Phys. Rev. E 89, 032405 (2014) - Published 18 March, 2014

Impact of nucleation on step-meandering instabilities during step-flow growth on vicinal surfaces

A. Beausoleil, P. Desjardins, and A. Rochefort

Phys. Rev. E 89, 032406 (2014) - Published 20 March, 2014

Peeling off an adhesive layer with spatially varying topography and shear modulus

Animangsu Ghatak

Phys. Rev. E 89, 032407 (2014) - Published 24 March, 2014

Rough viscoelastic sliding contact: Theory and experiments

G. Carbone and C. Putignano

Phys. Rev. E 89, 032408 (2014) - Published 25 March, 2014

Electrokinetic model for electric-field-induced interfacial instabilities

Priya Gambhire and Rochish Thaokar

Phys. Rev. E 89, 032409 (2014) - Published 26 March, 2014

Redeposition of a straight-sided buckle under pressure

Jérôme Colin, Christophe Coupeau, Julien Durinck, Alain Cimetière, and Jean Grilhé

Phys. Rev. E 89, 032410 (2014) - Published 26 March, 2014

Phase-field-crystal models and mechanical equilibrium

V. Heinonen, C. V. Achim, K. R. Elder, S. Buyukdagli, and T. Ala-Nissila

Phys. Rev. E 89, 032411 (2014) - Published 31 March, 2014

Wall-induced phase transition controlled by layering freezing

Huijun Zhang, Shuming Peng, Xinggui Long, Xiaosong Zhou, Jianhua Liang, Chubin Wan, Jian Zheng, and Xin Ju

Phys. Rev. E 89, 032412 (2014) - Published 31 March, 2014

Liquid Crystals

Complex superstructures in chiral liquid crystals: Surface-induced helix destruction

Wojciech Jeżewski

Phys. Rev. E 89, 032501 (2014) - Published 6 March, 2014

Cybotactic behavior in the de Vries smectic- $A$ ^* liquid-crystal structure formed by a silicon-containing molecule

Seong Ho Ryu, Tae Joo Shin, Tao Gong, Yongqiang Shen, Eva Korblova, Renfan Shao, David M. Walba, Noel A. Clark, and Dong Ki Yoon

Phys. Rev. E 89, 032502 (2014) - Published 10 March, 2014

Chiral smectic transition phases appearing near the electric-field-induced phase transition observed by resonant microbeam x-ray scattering

Atsuo Iida, Isa Nishiyama, and Yoichi Takanishi

Phys. Rev. E 89, 032503 (2014) - Published 10 March, 2014

Measurements of the dielectric and viscoelastic constants in mixtures of 4, $4^{'}$ - $n$ -octyl-cyanobiphenyl and biphenyl

Patrick Oswald and Camille Scalliet

Phys. Rev. E 89, 032504 (2014) - Published 10 March, 2014

Elastic octopoles and colloidal structures in nematic liquid crystals

S. B. Chernyshuk, O. M. Tovkach, and B. I. Lev

Phys. Rev. E 89, 032505 (2014) - Published 14 March, 2014

Origin of weak layer contraction in de Vries smectic liquid crystals

Dena M. Agra-Kooijman, HyungGuen Yoon, Sonal Dey, and Satyendra Kumar

Phys. Rev. E 89, 032506 (2014) - Published 21 March, 2014

Role of space charges on light-induced effects in nematic liquid crystals doped by methyl red

L. Lucchetti and F. Simoni

Phys. Rev. E 89, 032507 (2014) - Published 24 March, 2014

Backflow-mediated domain switching in nematic liquid crystals

Janez Turk and Daniel Svenšek

Phys. Rev. E 89, 032508 (2014) - Published 28 March, 2014

Polymers

Generalizing the correlated chromophore domain model of reversible photodegradation to include the effects of an applied electric field

Benjamin Anderson and Mark G. Kuzyk

Phys. Rev. E 89, 032601 (2014) - Published 5 March, 2014

Unfolding of collapsed polymers in shear flow: Effects of colloid banding structures in confining channels

Hsieh Chen and Alfredo Alexander-Katz

Phys. Rev. E 89, 032602 (2014) - Published 21 March, 2014

Physical theory of ionomer aggregation in water

P.-É. A. Melchy and M. H. Eikerling

Phys. Rev. E 89, 032603 (2014) - Published 24 March, 2014

Biological Physics

Mathematical model of alternative mechanism of telomere length maintenance

Richard Kollár, Katarína Bod'ová, Jozef Nosek, and L'ubomír Tomáška

Phys. Rev. E 89, 032701 (2014) - Published 4 March, 2014

Using multitype branching processes to quantify statistics of disease outbreaks in zoonotic epidemics

Sarabjeet Singh, David J. Schneider, and Christopher R. Myers

Phys. Rev. E 89, 032702 (2014) - Published 4 March, 2014

EDITORS' SUGGESTION

Inferring the spatiotemporal DNA replication program from noisy data

A. Baker and J. Bechhoefer

Phys. Rev. E 89, 032703 (2014) - Published 6 March, 2014

Nonequilibrium structure and dynamics in a microscopic model of thin-film active gels

D. A. Head, W. J. Briels, and Gerhard Gompper

Phys. Rev. E 89, 032705 (2014) - Published 10 March, 2014

Motor control of sound frequency in birdsong involves the interaction between air sac pressure and labial tension

Rodrigo Alonso, Franz Goller, and Gabriel B. Mindlin

Phys. Rev. E 89, 032706 (2014) - Published 10 March, 2014

RNA topology remolds electrostatic stabilization of viruses

Gonca Erdemci-Tandogan, Jef Wagner, Paul van der Schoot, Rudolf Podgornik, and Roya Zandi

Phys. Rev. E 89, 032707 (2014) - Published 14 March, 2014

DNA damage may drive nucleosomal reorganization to facilitate damage detection

Sarah E. LeGresley, Jamie Wilt, and Matthew Antonik

Phys. Rev. E 89, 032708 (2014) - Published 14 March, 2014

Inherent randomness of evolving populations

Marc Harper

Phys. Rev. E 89, 032709 (2014) - Published 17 March, 2014

Vanishing amplitude of backbone dynamics causes a true protein dynamical transition: ${}^{2}H$ NMR studies on perdeuterated C-phycocyanin

Kerstin Kämpf, Beke Kremmling, and Michael Vogel

Phys. Rev. E 89, 032710 (2014) - Published 17 March, 2014

Length-dependent β-sheet growth mechanisms of polyalanine peptides in water and on hydrophobic surfaces

Yan Mu, Binqing Tang, and Meng Yu

Phys. Rev. E 89, 032711 (2014) - Published 21 March, 2014

Nucleation-conversion-polymerization reactions of biological macromolecules with prenucleation clusters

Gonzalo A. Garcia, Samuel I. A. Cohen, Christopher M. Dobson, and Tuomas P. J. Knowles

Phys. Rev. E 89, 032712 (2014) - Published 24 March, 2014

Role of functionality in two-component signal transduction: A stochastic study

Alok Kumar Maity, Arnab Bandyopadhyay, Pinaki Chaudhury, and Suman K. Banik

Phys. Rev. E 89, 032713 (2014) - Published 24 March, 2014

Interacting motile agents: Taking a mean-field approach beyond monomers and nearest-neighbor steps

Catherine J. Penington, Barry D. Hughes, and Kerry A. Landman

Phys. Rev. E 89, 032714 (2014) - Published 24 March, 2014

Fluctuations of cell population in a colonic crypt

Qi-ming Pei, Xuan Zhan, Li-jian Yang, Chun Bao, Wei Cao, An-bang Li, Anvar Rozi, and Ya Jia

Phys. Rev. E 89, 032715 (2014) - Published 25 March, 2014

Stochastic resonance in an intracellular genetic perceptron

Russell Bates, Oleg Blyuss, and Alexey Zaikin

Phys. Rev. E 89, 032716 (2014) - Published 26 March, 2014

Hydrodynamic interaction between overlapping domains during recurrence of registration within planar lipid bilayer membranes

Tao Han, Trevor P. Bailey, and Mikko Haataja

Phys. Rev. E 89, 032717 (2014) - Published 26 March, 2014

Optimal search in interacting populations: Gaussian jumps versus Lévy flights

Ricardo Martínez-García, Justin M. Calabrese, and Cristóbal López

Phys. Rev. E 89, 032718 (2014) - Published 26 March, 2014

Localization phenomena in a DNA double-helix structure: A twisted ladder model

Sourav Kundu and S. N. Karmakar

Phys. Rev. E 89, 032719 (2014) - Published 27 March, 2014

Geometrical guidance and trapping transition of human sperm cells

A. Guidobaldi, Y. Jeyaram, I. Berdakin, V. V. Moshchalkov, C. A. Condat, V. I. Marconi, L. Giojalas, and A. V. Silhanek

Phys. Rev. E 89, 032720 (2014) - Published 28 March, 2014

Human turnover dynamics during sleep: Statistical behavior and its modeling

Mitsuru Yoneyama, Yasuyuki Okuma, Hiroya Utsumi, Hiroo Terashi, and Hiroshi Mitoma

Phys. Rev. E 89, 032721 (2014) - Published 31 March, 2014

Cooperative action of KIF1A Brownian motors with finite dwell time

David Oriola and Jaume Casademunt

Phys. Rev. E 89, 032722 (2014) - Published 31 March, 2014

Impact of morphology on diffusive dynamics on curved surfaces

Remy Kusters and Cornelis Storm

Phys. Rev. E 89, 032723 (2014) - Published 31 March, 2014

Self-localized states in species competition

Pavel V. Paulau, Damià Gomila, Cristóbal López, and Emilio Hernández-García

Phys. Rev. E 89, 032724 (2014) - Published 31 March, 2014

Optimal size of stochastic Hodgkin-Huxley neuronal systems for maximal energy efficiency in coding pulse signals

Lianchun Yu and Liwei Liu

Phys. Rev. E 89, 032725 (2014) - Published 31 March, 2014

Networks and Interdisciplinary Physics

Statistical validation of high-dimensional models of growing networks

Matúš Medo

Phys. Rev. E 89, 032801 (2014) - Published 3 March, 2014

Local paths to global coherence: Cutting networks down to size

Yu Hu, James Trousdale, Krešimir Josić, and Eric Shea-Brown

Phys. Rev. E 89, 032802 (2014) - Published 10 March, 2014

Crosstalk and transitions between multiple spatial maps in an attractor neural network model of the hippocampus: Collective motion of the activity

R. Monasson and S. Rosay

Phys. Rev. E 89, 032803 (2014) - Published 11 March, 2014

Structural measures for multiplex networks

Federico Battiston, Vincenzo Nicosia, and Vito Latora

Phys. Rev. E 89, 032804 (2014) - Published 12 March, 2014

Capital death in the world market

Adam Avakian, Boris Podobnik, Manuela Piskor, and H. Eugene Stanley

Phys. Rev. E 89, 032805 (2014) - Published 13 March, 2014

Game theory in models of pedestrian room evacuation

S. Bouzat and M. N. Kuperman

Phys. Rev. E 89, 032806 (2014) - Published 14 March, 2014

Temporal percolation in activity-driven networks

Michele Starnini and Romualdo Pastor-Satorras

Phys. Rev. E 89, 032807 (2014) - Published 14 March, 2014

Cascading failures in networks with proximate dependent nodes

Yosef Kornbluth, Steven Lowinger, Gabriel Cwilich, and Sergey V. Buldyrev

Phys. Rev. E 89, 032808 (2014) - Published 20 March, 2014

Improving the performance of algorithms to find communities in networks

Richard K. Darst, Zohar Nussinov, and Santo Fortunato

Phys. Rev. E 89, 032809 (2014) - Published 20 March, 2014

Density-based and transport-based core-periphery structures in networks

Sang Hoon Lee, Mihai Cucuringu, and Mason A. Porter

Phys. Rev. E 89, 032810 (2014) - Published 20 March, 2014

Topological implications of negative curvature for biological and social networks

Réka Albert, Bhaskar DasGupta, and Nasim Mobasheri

Phys. Rev. E 89, 032811 (2014) - Published 24 March, 2014

Robustness of a partially interdependent network formed of clustered networks

Shuai Shao, Xuqing Huang, H. Eugene Stanley, and Shlomo Havlin

Phys. Rev. E 89, 032812 (2014) - Published 25 March, 2014

Promoting collective motion of self-propelled agents by distance-based influence

Han-Xin Yang, Tao Zhou, and Liang Huang

Phys. Rev. E 89, 032813 (2014) - Published 26 March, 2014

Topological properties and fractal analysis of a recurrence network constructed from fractional Brownian motions

Jin-Long Liu, Zu-Guo Yu, and Vo Anh

Phys. Rev. E 89, 032814 (2014) - Published 31 March, 2014

Nonlinear Dynamics and Chaos

Diverse routes of transition from amplitude to oscillation death in coupled oscillators under additional repulsive links

C. R. Hens, Pinaki Pal, Sourav K. Bhowmick, Prodyot K. Roy, Abhijit Sen, and Syamal K. Dana

Phys. Rev. E 89, 032901 (2014) - Published 5 March, 2014

Nonlinear Talbot effect of rogue waves

Yiqi Zhang (张贻齐), Milivoj R. Belić, Huaibin Zheng (郑淮斌), Haixia Chen (陈海霞), Changbiao Li (李昌彪), Jianping Song (宋建平), and Yanpeng Zhang (张彦鹏)

Phys. Rev. E 89, 032902 (2014) - Published 5 March, 2014

Characteristics of swarms on the edge of fragmentation

Giuliano Punzo, Jules Simo, Derek J. Bennet, and Malcolm Macdonald

Phys. Rev. E 89, 032903 (2014) - Published 10 March, 2014

Inverse approach to chronotaxic systems for single-variable time series

Philip T. Clemson, Yevhen F. Suprunenko, Tomislav Stankovski, and Aneta Stefanovska

Phys. Rev. E 89, 032904 (2014) - Published 10 March, 2014

Frequency dispersion in the time-delayed Kuramoto model

Anders Nordenfelt, Alexandre Wagemakers, and Miguel A. F. Sanjuán

Phys. Rev. E 89, 032905 (2014) - Published 10 March, 2014

Synchronization in phase-coupled Kuramoto oscillator networks with axonal delay and synaptic plasticity

L. Timms and L. Q. English

Phys. Rev. E 89, 032906 (2014) - Published 10 March, 2014

Vectorial velocity filter for ultracold neutrons based on a surface-disordered mirror system

L. A. Chizhova, S. Rotter, T. Jenke, G. Cronenberg, P. Geltenbort, G. Wautischer, H. Filter, H. Abele, and J. Burgdörfer

Phys. Rev. E 89, 032907 (2014) - Published 10 March, 2014

Hydrodynamic instability of thermal fronts in reactive porous media: Spinning patterns

Olga Nekhamkina and Moshe Sheintuch

Phys. Rev. E 89, 032908 (2014) - Published 11 March, 2014

Scattering experiments with microwave billiards at an exceptional point under broken time-reversal invariance

S. Bittner, B. Dietz, H. L. Harney, M. Miski-Oglu, A. Richter, and F. Schäfer

Phys. Rev. E 89, 032909 (2014) - Published 13 March, 2014

Fundamental- and first-order localized states in a cubic-quintic reaction-diffusion system

P. V. Paulau

Phys. Rev. E 89, 032910 (2014) - Published 13 March, 2014

Resonances and poles in isoscattering microwave networks and graphs

Michał Ławniczak, Adam Sawicki, Szymon Bauch, Marek Kuś, and Leszek Sirko

Phys. Rev. E 89, 032911 (2014) - Published 13 March, 2014

Optimized spectral estimation for nonlinear synchronizing systems

Linda Sommerlade, Malenka Mader, Wolfgang Mader, Jens Timmer, Marco Thiel, Celso Grebogi, and Björn Schelter

Phys. Rev. E 89, 032912 (2014) - Published 14 March, 2014

Nonlinear time series analysis and clustering for jet axis identification in vertical turbulent heated jets

A. K. Charakopoulos, T. E. Karakasidis, P. N. Papanicolaou, and A. Liakopoulos

Phys. Rev. E 89, 032913 (2014) - Published 14 March, 2014

Rogue wave modes for a derivative nonlinear Schrödinger model

Hiu Ning Chan, Kwok Wing Chow, David Jacob Kedziora, Roger Hamilton James Grimshaw, and Edwin Ding

Phys. Rev. E 89, 032914 (2014) - Published 17 March, 2014

Amplitude death in oscillator networks with variable-delay coupling

Aleksandar Gjurchinovski, Anna Zakharova, and Eckehard Schöll

Phys. Rev. E 89, 032915 (2014) - Published 24 March, 2014

Multiscale multifractal analysis of traffic signals to uncover richer structures

Jing Wang, Pengjian Shang, and Xingran Cui

Phys. Rev. E 89, 032916 (2014) - Published 24 March, 2014

Transition to synchronization in a Kuramoto model with the first- and second-order interaction terms

Keren Li, Shen Ma, Haihong Li, and Junzhong Yang

Phys. Rev. E 89, 032917 (2014) - Published 24 March, 2014

Finite-time Lyapunov exponents in time-delayed nonlinear dynamical systems

Kazutaka Kanno and Atsushi Uchida

Phys. Rev. E 89, 032918 (2014) - Published 25 March, 2014

Multistabilities and symmetry-broken one-color and two-color states in closely coupled single-mode lasers

Eoin Clerkin, Stephen O'Brien, and Andreas Amann

Phys. Rev. E 89, 032919 (2014) - Published 26 March, 2014

Creation of two-dimensional composite solitons in spin-orbit-coupled self-attractive Bose-Einstein condensates in free space

Hidetsugu Sakaguchi, Ben Li, and Boris A. Malomed

Phys. Rev. E 89, 032920 (2014) - Published 26 March, 2014

Finite-time synchronization of tunnel-diode-based chaotic oscillators

Patrick Louodop, Hilaire Fotsin, Michaux Kountchou, Elie B. Megam Ngouonkadi, Hilda A. Cerdeira, and Samuel Bowong

Phys. Rev. E 89, 032921 (2014) - Published 26 March, 2014

Temporal flooding of regular islands by chaotic wave packets

Lars Bittrich, Arnd Bäcker, and Roland Ketzmerick

Phys. Rev. E 89, 032922 (2014) - Published 27 March, 2014

Minimal model dynamics for twelvefold quasipatterns

Damià Gomila and Daniel Walgraef

Phys. Rev. E 89, 032923 (2014) - Published 31 March, 2014

Damped-driven granular chains: An ideal playground for dark breathers and multibreathers

C. Chong, F. Li, J. Yang, M. O. Williams, I. G. Kevrekidis, P. G. Kevrekidis, and C. Daraio

Phys. Rev. E 89, 032924 (2014) - Published 31 March, 2014

Fluid Dynamics

Jittery velocity relaxation of an elastic sphere immersed in a viscous incompressible fluid

B. U. Felderhof

Phys. Rev. E 89, 033001 (2014) - Published 4 March, 2014

Transition to two-dimensionality in magnetohydrodynamic turbulent Taylor-Couette flow

Yurong Zhao, Jianjun Tao, and Oleg Zikanov

Phys. Rev. E 89, 033002 (2014) - Published 4 March, 2014

Zero absolute vorticity: Insight from experiments in rotating laminar plane Couette flow

Alexandre Suryadi, Antonio Segalini, and P. Henrik Alfredsson

Phys. Rev. E 89, 033003 (2014) - Published 5 March, 2014

Effect of confinement on the deformation of microfluidic drops

Camilo Ulloa, Alberto Ahumada, and María Luisa Cordero

Phys. Rev. E 89, 033004 (2014) - Published 6 March, 2014

Preferred location of droplet collisions in turbulent flows

Vincent E. Perrin and Harm J. J. Jonker

Phys. Rev. E 89, 033005 (2014) - Published 6 March, 2014

Acceleration statistics in thermally driven superfluid turbulence

Andrew W. Baggaley and Carlo F. Barenghi

Phys. Rev. E 89, 033006 (2014) - Published 10 March, 2014

Electro-osmotic flow in disordered porous and fractured media

Hossein Hamzehpour, Asal Atakhani, Alok Kumar Gupta, and Muhammad Sahimi

Phys. Rev. E 89, 033007 (2014) - Published 10 March, 2014

Nonlinear energy transfers and phase diagrams for geostrophically balanced rotating-stratified flows

Corentin Herbert

Phys. Rev. E 89, 033008 (2014) - Published 10 March, 2014

$α$ effect in a turbulent liquid-metal plane Couette flow

G. Rüdiger and A. Brandenburg

Phys. Rev. E 89, 033009 (2014) - Published 11 March, 2014

Electrohydrodynamic instability in an annular liquid layer with radial conductivity gradients

Zijing Ding and Teck Neng Wong

Phys. Rev. E 89, 033010 (2014) - Published 12 March, 2014

Numerical simulations of electrostatically driven jets from nonviscous droplets

M. Garzon, L. J. Gray, and J. A. Sethian

Phys. Rev. E 89, 033011 (2014) - Published 13 March, 2014

Superadiabatic evolution of acoustic and vorticity perturbations in Couette flow

Gael Favraud and Vincent Pagneux

Phys. Rev. E 89, 033012 (2014) - Published 14 March, 2014

Small-scale anisotropic intermittency in magnetohydrodynamic turbulence at low magnetic Reynolds numbers

Naoya Okamoto, Katsunori Yoshimatsu, Kai Schneider, and Marie Farge

Phys. Rev. E 89, 033013 (2014) - Published 14 March, 2014

Influence of the angle between the wind and the isothermal surfaces on the boundary layer structures in turbulent thermal convection

Olga Shishkina, Sebastian Wagner, and Susanne Horn

Phys. Rev. E 89, 033014 (2014) - Published 21 March, 2014

Streamline segment statistics of premixed flames with nonunity Lewis numbers

Nilanjan Chakraborty, Lipo Wang, and Markus Klein

Phys. Rev. E 89, 033015 (2014) - Published 26 March, 2014

Bulk stress distributions in the pore space of sphere-packed beds under Darcy flow conditions

Ngoc H. Pham, Roman S. Voronov, Naga Rajesh Tummala, and Dimitrios V. Papavassiliou

Phys. Rev. E 89, 033016 (2014) - Published 26 March, 2014

Concentration dependence of nanochannel impedance and the determination of surface charge

Jarrod Schiffbauer, Uri Liel, and Gilad Yossifon

Phys. Rev. E 89, 033017 (2014) - Published 27 March, 2014

Numerical simulations of the Richtmyer-Meshkov instability in solid-vacuum interfaces using calibrated plasticity laws

A. López Ortega, M. Lombardini, D. I. Pullin, and D. I. Meiron

Phys. Rev. E 89, 033018 (2014) - Published 28 March, 2014

FEATURED IN PHYSICS

EDITORS' SUGGESTION

Gas flow in plant microfluidic networks controlled by capillary valves

M. Capron, Ph. Tordjeman, F. Charru, E. Badel, and H. Cochard

Phys. Rev. E 89, 033019 (2014) - Published 28 March, 2014

Classical Physics

Bounded dynamics in finite $PT$ -symmetric magnetic metamaterials

Mario I. Molina

Phys. Rev. E 89, 033201 (2014) - Published 3 March, 2014

Metric-signature topological transitions in dispersive metamaterials

E. Reyes-Gómez, S. B. Cavalcanti, L. E. Oliveira, and C. A. A. de Carvalho

Phys. Rev. E 89, 033202 (2014) - Published 14 March, 2014

Calculation of space localized properties in correlated quantum Monte Carlo methods with reweighting: The nonlocality of statistical uncertainties

Roland Assaraf and Dominik Domin

Phys. Rev. E 89, 033304 (2014) - Published 10 March, 2014

ERRATA

Publisher's Note: Detection and control of combustion instability based on the concept of dynamical system theory [Phys. Rev. E 89, 022910 (2014)]

Hiroshi Gotoda, Yuta Shinoda, Masaki Kobayashi, Yuta Okuno, and Shigeru Tachibana

Phys. Rev. E 89, 039901 (2014) - Published 17 March, 2014

Publisher's Note: Inverse transitions in a spin-glass model on a scale-free network [Phys. Rev. E 89, 022803 (2014)]

Do-Hyun Kim

Phys. Rev. E 89, 039902 (2014) - Published 20 March, 2014

Publisher's Note: Spectral fluctuation and correlation structure of $δ_{n}$ statistics in the spectra of interacting trapped bosons [Phys. Rev. E 87, 062101 (2013)]

Kamalika Roy, Barnali Chakrabarti, and V. K. B Kota

Phys. Rev. E 89, 039903 (2014) - Published 20 March, 2014

Publisher's Note: Correlation potential of a test ion near a strongly charged plate [Phys. Rev. E 89, 032305 (2014)]

Bing-Sui Lu and Xiangjun Xing

Phys. Rev. E 89, 039904 (2014) - Published 31 March, 2014

Erratum: Spin-glass splitting in the quantum Ghatak-Sherrington model [Phys. Rev. E 87, 042127 (2013)]

Do-Hyun Kim

Phys. Rev. E 89, 039905 (2014) - Published 31 March, 2014