Skip to Main Content

Physical Review E

Volume 85, Issue 6

June 2012

Browse Issues:

HIGHLIGHTED ARTICLES

FEATURED IN PHYSICS

Dimer motion on a periodic substrate: Spontaneous symmetry breaking and absolute negative mobility

David Speer, Ralf Eichhorn, Mykhaylo Evstigneev, and Peter Reimann

Phys. Rev. E 85, 061132 (2012) - Published 28 June, 2012

RAPID COMMUNICATIONS

Statistical physics

RAPID COMMUNICATION

Thermalization of interacting fermions and delocalization in Fock space

Clemens Neuenhahn and Florian Marquardt

Phys. Rev. E 85, 060101(R) (2012) - Published 1 June, 2012

RAPID COMMUNICATION

Normal heat conduction in one-dimensional momentum conserving lattices with asymmetric interactions

Yi Zhong, Yong Zhang, Jiao Wang, and Hong Zhao

Phys. Rev. E 85, 060102(R) (2012) - Published 20 June, 2012

RAPID COMMUNICATION

Compact waves in microscopic nonlinear diffusion

P. I. Hurtado and P. L. Krapivsky

Phys. Rev. E 85, 060103(R) (2012) - Published 21 June, 2012

ARTICLES

Statistical physics

Effects of phase disorder on transport of globally coupled Brownian motors

Dan Wu and Shiqun Zhu

Phys. Rev. E 85, 061101 (2012) - Published 1 June, 2012

First-principles derivation of static avalanche-size distributions

Pierre Le Doussal and Kay Jörg Wiese

Phys. Rev. E 85, 061102 (2012) - Published 1 June, 2012

Energy-landscape analysis of the two-dimensional nearest-neighbor $φ^{4}$ model

Dhagash Mehta, Jonathan D. Hauenstein, and Michael Kastner

Phys. Rev. E 85, 061103 (2012) - Published 4 June, 2012

Computational study of a multistep height model

Matthew Drake, Jonathan Machta, Youjin Deng, Douglas Abraham, and Charles Newman

Phys. Rev. E 85, 061104 (2012) - Published 4 June, 2012

Caloric curve of star clusters

Lapo Casetti and Cesare Nardini

Phys. Rev. E 85, 061105 (2012) - Published 5 June, 2012

Universality aspects of the $d = 3$ random-bond Blume-Capel model

A. Malakis, A. Nihat Berker, N. G. Fytas, and T. Papakonstantinou

Phys. Rev. E 85, 061106 (2012) - Published 6 June, 2012

General expression for entropy production in transport processes based on the thermomass model

Yuan Dong (董源), Bing-Yang Cao (曹炳阳), and Zeng-Yuan Guo (过增元)

Phys. Rev. E 85, 061107 (2012) - Published 8 June, 2012

Ordered packing of elastic wires in a sphere

Javad Najafi, Norbert Stoop, Falk Wittel, and Mehdi Habibi

Phys. Rev. E 85, 061108 (2012) - Published 8 June, 2012

Supersymmetric extension of the quantum spherical model

Pedro R. S. Gomes, P. F. Bienzobaz, and M. Gomes

Phys. Rev. E 85, 061109 (2012) - Published 8 June, 2012

Continuous percolation phase transitions of random networks under a generalized Achlioptas process

Jingfang Fan, Maoxin Liu, Liangsheng Li, and Xiaosong Chen

Phys. Rev. E 85, 061110 (2012) - Published 8 June, 2012

Single-file diffusion of particles in a box: Transient behaviors

Jean-Baptiste Delfau, Christophe Coste, and Michel Saint Jean

Phys. Rev. E 85, 061111 (2012) - Published 11 June, 2012

Heat current limiter and constant heat current source

Junpeng Wu (吴俊鹏), Lei Wang (王雷), and Baowen Li (李保文)

Phys. Rev. E 85, 061112 (2012) - Published 11 June, 2012

Superconductor-insulator transition on annealed complex networks

Ginestra Bianconi

Phys. Rev. E 85, 061113 (2012) - Published 11 June, 2012

Power spectrum of mass and activity fluctuations in a sandpile

Avinash Chand Yadav, Ramakrishna Ramaswamy, and Deepak Dhar

Phys. Rev. E 85, 061114 (2012) - Published 12 June, 2012

Linear response theory in the Vlasov equation for homogeneous and for inhomogeneous quasistationary states

Shun Ogawa and Yoshiyuki Y. Yamaguchi

Phys. Rev. E 85, 061115 (2012) - Published 12 June, 2012

Distribution of velocities and acceleration for a particle in Brownian correlated disorder: Inertial case

Pierre Le Doussal, Aleksandra Petković, and Kay Jörg Wiese

Phys. Rev. E 85, 061116 (2012) - Published 15 June, 2012

Percolation in random sequential adsorption of extended objects on a triangular lattice

Lj. Budinski-Petković, I. Lončarević, M. Petković, Z. M. Jakšić, and S. B. Vrhovac

Phys. Rev. E 85, 061117 (2012) - Published 19 June, 2012

Surface scaling properties of decagonal quasicrystals under nonequilibrium vertical growth

Hyeong-Chai Jeong and Jin Min Kim

Phys. Rev. E 85, 061118 (2012) - Published 20 June, 2012

Spectral fluctuation and $1 / f^{α}$ noise in the energy level statistics of interacting trapped bosons

Kamalika Roy, Barnali Chakrabarti, Anindya Biswas, V. K. B. Kota, and Sudip Kumar Haldar

Phys. Rev. E 85, 061119 (2012) - Published 20 June, 2012

Hierarchical maximum entropy principle for generalized superstatistical systems and Bose-Einstein condensation of light

Denis Nikolaevich Sob'yanin

Phys. Rev. E 85, 061120 (2012) - Published 20 June, 2012

Evolution of optimal Lévy-flight strategies in human mental searches

Filippo Radicchi and Andrea Baronchelli

Phys. Rev. E 85, 061121 (2012) - Published 20 June, 2012

Effect of particle polydispersity on the irreversible adsorption of fine particles on patterned substrates

J. F. Marques, A. B. Lima, N. A. M. Araújo, and A. Cadilhe

Phys. Rev. E 85, 061122 (2012) - Published 21 June, 2012

Geometrical frustration of an extended Hubbard diamond chain in the quasiatomic limit

Onofre Rojas, S. M. de Souza, and N. S. Ananikian

Phys. Rev. E 85, 061123 (2012) - Published 21 June, 2012

Zon-Cohen singularity and negative inverse temperature in a trapped-particle limit

Takahiro Nemoto

Phys. Rev. E 85, 061124 (2012) - Published 21 June, 2012

Resonance dynamics evoked via noise recycling procedure

Zhongkui Sun, Xiaoli Yang, and Wei Xu

Phys. Rev. E 85, 061125 (2012) - Published 22 June, 2012

Quantum refrigerators and the third law of thermodynamics

Amikam Levy, Robert Alicki, and Ronnie Kosloff

Phys. Rev. E 85, 061126 (2012) - Published 26 June, 2012

Nonequilibrium and information: The role of cross correlations

A. Crisanti, A. Puglisi, and D. Villamaina

Phys. Rev. E 85, 061127 (2012) - Published 26 June, 2012

Universal anomalous diffusion of weakly damped particles

V. Bezuglyy, M. Wilkinson, and B. Mehlig

Phys. Rev. E 85, 061128 (2012) - Published 26 June, 2012

Analytical description of the quantum-mesoscopic-classical transition in systems with quasidiscrete environments

N. M. Chtchelkatchev and A. Glatz

Phys. Rev. E 85, 061129 (2012) - Published 26 June, 2012

Wigner surmise for mixed symmetry classes in random matrix theory

Sebastian Schierenberg, Falk Bruckmann, and Tilo Wettig

Phys. Rev. E 85, 061130 (2012) - Published 27 June, 2012

Density of zeros of the ferromagnetic Ising model on a family of fractals

Milan Knežević and Dragica Knežević

Phys. Rev. E 85, 061131 (2012) - Published 28 June, 2012

FEATURED IN PHYSICS

Dimer motion on a periodic substrate: Spontaneous symmetry breaking and absolute negative mobility

David Speer, Ralf Eichhorn, Mykhaylo Evstigneev, and Peter Reimann

Phys. Rev. E 85, 061132 (2012) - Published 28 June, 2012

Abelian Manna model in three dimensions and below

Hoai Nguyen Huynh and Gunnar Pruessner

Phys. Rev. E 85, 061133 (2012) - Published 29 June, 2012

Equilibrium and linear transport properties of fluids

Temperature-difference-driven mass transfer through the vapor from a cold to a warm liquid

Henning Struchtrup, Signe Kjelstrup, and Dick Bedeaux

Phys. Rev. E 85, 061201 (2012) - Published 4 June, 2012

Theory of molecular crowding in Brownian hard-sphere liquids

Alessio Zaccone and Eugene M. Terentjev

Phys. Rev. E 85, 061202 (2012) - Published 15 June, 2012

Granular materials

Shock propagation in granular flow subjected to an external impact

Sudhir N. Pathak, Zahera Jabeen, Purusattam Ray, and R. Rajesh

Phys. Rev. E 85, 061301 (2012) - Published 1 June, 2012

Separation patterns between Brazilian nut and reversed Brazilian nut of a binary granular system

Zi-Ang Xie, Ping Wu, Shi-Ping Zhang, Sen Chen, Chao Jia, Chuan-Ping Liu, and Li Wang

Phys. Rev. E 85, 061302 (2012) - Published 4 June, 2012

Critical flow and clustering in a model of granular transport: The interplay between drift and antidiffusion

Giorgos Kanellopoulos and Ko van der Weele

Phys. Rev. E 85, 061303 (2012) - Published 5 June, 2012

Computer simulations of the collapse of columns formed by elongated grains

Horacio Tapia-McClung and Roberto Zenit

Phys. Rev. E 85, 061304 (2012) - Published 7 June, 2012

Constraints and vibrations in static packings of ellipsoidal particles

Carl F. Schreck, Mitch Mailman, Bulbul Chakraborty, and Corey S. O'Hern

Phys. Rev. E 85, 061305 (2012) - Published 13 June, 2012

Deformation field in indentation of a granular ensemble

Tejas G. Murthy, Ebenezer Gnanamanickam, and Srinivasan Chandrasekar

Phys. Rev. E 85, 061306 (2012) - Published 14 June, 2012

Calculations of the structure of basin volumes for mechanically stable packings

S. S. Ashwin, Jerzy Blawzdziewicz, Corey S. O'Hern, and Mark D. Shattuck

Phys. Rev. E 85, 061307 (2012) - Published 19 June, 2012

Nonequilibrium thermodynamics in sheared hard-sphere materials

Charles K. C. Lieou and J. S. Langer

Phys. Rev. E 85, 061308 (2012) - Published 19 June, 2012

Flow-induced agitations create a granular fluid: Effective viscosity and fluctuations

Kiri Nichol and Martin van Hecke

Phys. Rev. E 85, 061309 (2012) - Published 28 June, 2012

Fluctuation-dissipation relations for motions of center of mass in driven granular fluids under gravity

Jun'ichi Wakou and Masaharu Isobe

Phys. Rev. E 85, 061311 (2012) - Published 29 June, 2012

Colloidal dispersions, suspensions, and aggregates

Deformation of Platonic foam cells: Effect on growth rate

Myfanwy E. Evans, Johannes Zirkelbach, Gerd E. Schröder-Turk, Andrew M. Kraynik, and Klaus Mecke

Phys. Rev. E 85, 061401 (2012) - Published 1 June, 2012

Hydrodynamically induced rhythmic motion of optically driven colloidal particles on a ring

Yuriko Sassa, Shuhei Shibata, Yasutaka Iwashita, and Yasuyuki Kimura

Phys. Rev. E 85, 061402 (2012) - Published 1 June, 2012

Packings of monodisperse emulsions in flat microfluidic channels

Ohle Claussen, Stephan Herminghaus, and Martin Brinkmann

Phys. Rev. E 85, 061403 (2012) - Published 6 June, 2012

Structure of colloidosomes with tunable particle density: Simulation versus experiment

Riccardo Fantoni, Johannes W. O. Salari, and Bert Klumperman

Phys. Rev. E 85, 061404 (2012) - Published 6 June, 2012

Random versus sequential pathway of molecular self-assembly

Maxim P. Evstigneev, Anatoly S. Buchelnikov, and Vladyslav P. Evstigneev

Phys. Rev. E 85, 061405 (2012) - Published 12 June, 2012

Langevin dynamics simulations of a two-dimensional colloidal crystal under confinement and shear

D. Wilms, P. Virnau, S. Sengupta, and K. Binder

Phys. Rev. E 85, 061406 (2012) - Published 18 June, 2012

Connectivity percolation in suspensions of hard platelets

Maneesh Mathew, Tanja Schilling, and Martin Oettel

Phys. Rev. E 85, 061407 (2012) - Published 20 June, 2012

Modeling the structure of liquids and crystals using one- and two-component modified phase-field crystal models

M. J. Robbins, A. J. Archer, U. Thiele, and E. Knobloch

Phys. Rev. E 85, 061408 (2012) - Published 21 June, 2012

Structured and complex fluids

Relaxation mechanisms in glassy dynamics: The Arrhenius and fragile regimes

H. George E. Hentschel, Smarajit Karmakar, Itamar Procaccia, and Jacques Zylberg

Phys. Rev. E 85, 061501 (2012) - Published 7 June, 2012

Manifestations of dynamical facilitation in glassy materials

Yael S. Elmatad and Aaron S. Keys

Phys. Rev. E 85, 061502 (2012) - Published 20 June, 2012

Analytical model for three-dimensional Mercedes-Benz water molecules

T. Urbic

Phys. Rev. E 85, 061503 (2012) - Published 25 June, 2012

Space-time correlated two-particle hopping in glassy fluids: Structural relaxation, irreversibility, decoupling, and facilitation

Daniel M. Sussman and Kenneth S. Schweizer

Phys. Rev. E 85, 061504 (2012) - Published 25 June, 2012

Simple solvable energy-landscape model that shows a thermodynamic phase transition and a glass transition

Gerardo G. Naumis

Phys. Rev. E 85, 061505 (2012) - Published 28 June, 2012

Films, interfaces, and crystal growth

Wetting transition in the two-dimensional Blume-Capel model: A Monte Carlo study

Ezequiel V. Albano and Kurt Binder

Phys. Rev. E 85, 061601 (2012) - Published 1 June, 2012

Multiscale deformation of a liquid surface in interaction with a nanoprobe

R. Ledesma-Alonso, P. Tordjeman, and D. Legendre

Phys. Rev. E 85, 061602 (2012) - Published 7 June, 2012

Thermal singularity and droplet motion in one-component fluids on solid substrates with thermal gradients

Xinpeng Xu and Tiezheng Qian

Phys. Rev. E 85, 061603 (2012) - Published 26 June, 2012

Evaporation of picoliter droplets on surfaces with a range of wettabilities and thermal conductivities

E. L. Talbot, A. Berson, P. S. Brown, and C. D. Bain

Phys. Rev. E 85, 061604 (2012) - Published 26 June, 2012

Coarsening of elastically stressed, strongly anisotropic driven thin films

Peng Zhou, Steven Wise, Xiangrong Li, and John Lowengrub

Phys. Rev. E 85, 061605 (2012) - Published 28 June, 2012

Liquid crystals

Surface free energies for nematic shells

Gaetano Napoli and Luigi Vergori

Phys. Rev. E 85, 061701 (2012) - Published 1 June, 2012

Multistability in planar liquid crystal wells

Chong Luo, Apala Majumdar, and Radek Erban

Phys. Rev. E 85, 061702 (2012) - Published 8 June, 2012

Orientational order parameters of a de Vries–type ferroelectric liquid crystal obtained by polarized Raman spectroscopy and x-ray diffraction

A. Sanchez-Castillo, M. A. Osipov, S. Jagiella, Z. H. Nguyen, M. Kašpar, V. Hamplovă, J. Maclennan, and F. Giesselmann

Phys. Rev. E 85, 061703 (2012) - Published 11 June, 2012

Dielectric technique to measure the twist elastic constant of liquid crystals: The case of a bent-core material

P. Salamon, N. Éber, J. Seltmann, M. Lehmann, J. T. Gleeson, S. Sprunt, and A. Jákli

Phys. Rev. E 85, 061704 (2012) - Published 14 June, 2012

Surface and bulk contributions to nematic order reconstruction

A. Amoddeo, R. Barberi, and G. Lombardo

Phys. Rev. E 85, 061705 (2012) - Published 18 June, 2012

Isotropic and nematic phases of the hard spheroid fluid: A virial approach

X.-M. You, A. Yu. Vlasov, L. Anton, and A. J. Masters

Phys. Rev. E 85, 061706 (2012) - Published 19 June, 2012

Structural origin of enhanced translational diffusion in two-dimensional hard-ellipse fluids

S. Davatolhagh and S. Foroozan

Phys. Rev. E 85, 061707 (2012) - Published 20 June, 2012

Aspect ratio and polydispersity dependence of isotropic-nematic transition in discotic suspensions

Andres F. Mejia, Ya-Wen Chang, Ratna Ng, Min Shuai, M. Sam Mannan, and Zhengdong Cheng

Phys. Rev. E 85, 061708 (2012) - Published 20 June, 2012

Enhanced Landau–de Gennes potential for nematic liquid crystals from a systematic coarse-graining procedure

Patrick Ilg

Phys. Rev. E 85, 061709 (2012) - Published 22 June, 2012

Solution of the Onsager model for the structure of rigid rods confined on a spherical surface

Wu-Yang Zhang, Ying Jiang, and Jeff Z. Y. Chen

Phys. Rev. E 85, 061710 (2012) - Published 28 June, 2012

Polymers

Separation of long linear polymers in gel electrophoresis with alternating electric fields: A theoretical study using the necklace model

G. R. Terranova, H. O. Mártin, and C. M. Aldao

Phys. Rev. E 85, 061801 (2012) - Published 11 June, 2012

Asymmetry-symmetry transition of double-sided adhesive tapes

Tetsuo Yamaguchi, Hiroyuki Muroo, Yutaka Sumino, and Masao Doi

Phys. Rev. E 85, 061802 (2012) - Published 11 June, 2012

Process time distribution of driven polymer transport

Takuya Saito and Takahiro Sakaue

Phys. Rev. E 85, 061803 (2012) - Published 14 June, 2012

Biological physics

Applying the Kelvin probe to biological tissues: Theoretical and computational analyses

Andrew C. Ahn, Brian J. Gow, Ørjan G. Martinsen, Min Zhao, Alan J. Grodzinsky, and Iain D. Baikie

Phys. Rev. E 85, 061901 (2012) - Published 1 June, 2012

Using noise to determine cardiac restitution with memory

Shu Dai and James P. Keener

Phys. Rev. E 85, 061902 (2012) - Published 1 June, 2012

Dynamical self-regulation in self-propelled particle flows

Arvind Gopinath, Michael F. Hagan, M. Cristina Marchetti, and Aparna Baskaran

Phys. Rev. E 85, 061903 (2012) - Published 1 June, 2012

Effects of cooperative ion-channel interactions on the dynamics of excitable membranes

Dmitry Zarubin, Ekaterina Zhuchkova, and Susanne Schreiber

Phys. Rev. E 85, 061904 (2012) - Published 1 June, 2012

Complex synchronous behavior in interneuronal networks with delayed inhibitory and fast electrical synapses

Daqing Guo, Qingyun Wang, and Matjaž Perc

Phys. Rev. E 85, 061905 (2012) - Published 7 June, 2012

Controlling activation site density by low-energy far-field stimulation in cardiac tissue

Marcel Hörning, Seiji Takagi, and Kenichi Yoshikawa

Phys. Rev. E 85, 061906 (2012) - Published 7 June, 2012

Blinking fluorescence of single donor-acceptor pairs: Important role of ``dark'' states in resonance energy transfer via singlet levels

I. S. Osad'ko and A. L. Shchukina

Phys. Rev. E 85, 061907 (2012) - Published 8 June, 2012

Generalized index for spatial data sets as a measure of complete spatial randomness

Emily J. Hackett-Jones, Kale J. Davies, Benjamin J. Binder, and Kerry A. Landman

Phys. Rev. E 85, 061908 (2012) - Published 8 June, 2012

Protein loops, solitons, and side-chain visualization with applications to the left-handed helix region

Martin Lundgren, Antti J. Niemi, and Fan Sha

Phys. Rev. E 85, 061909 (2012) - Published 11 June, 2012

Pulling or compressing a vesicle by force: Solution to the bending energy model

Jeff Z. Y. Chen

Phys. Rev. E 85, 061910 (2012) - Published 11 June, 2012

Multistability in a neuron model with extracellular potassium dynamics

Xing-Xing Wu and J. W. Shuai

Phys. Rev. E 85, 061911 (2012) - Published 13 June, 2012

Main transition in the Pink membrane model: Finite-size scaling and the influence of surface roughness

Sina Sadeghi and R. L. C. Vink

Phys. Rev. E 85, 061912 (2012) - Published 18 June, 2012

Stochastic single-gene autoregulation

Tomás Aquino, Elsa Abranches, and Ana Nunes

Phys. Rev. E 85, 061913 (2012) - Published 19 June, 2012

General aspects of hydrodynamic interactions between three-sphere low-Reynolds-number swimmers

Majid Farzin, Kiyandokht Ronasi, and Ali Najafi

Phys. Rev. E 85, 061914 (2012) - Published 19 June, 2012

Stochastic modeling of regulation of gene expression by multiple small RNAs

Charles Baker, Tao Jia, and Rahul V. Kulkarni

Phys. Rev. E 85, 061915 (2012) - Published 20 June, 2012

Optimal diffusion coefficient estimation in single-particle tracking

Xavier Michalet and Andrew J. Berglund

Phys. Rev. E 85, 061916 (2012) - Published 21 June, 2012

Bistable collective behavior of polymers tethered in a nanopore

Dino Osmanovic, Joe Bailey, Anthony H. Harker, Ariberto Fassati, Bart W. Hoogenboom, and Ian J. Ford

Phys. Rev. E 85, 061917 (2012) - Published 21 June, 2012

Phase space approach for modeling of epileptic dynamics

Yujiang Wang, Marc Goodfellow, Peter Neal Taylor, and Gerold Baier

Phys. Rev. E 85, 061918 (2012) - Published 22 June, 2012

Population density approach for discrete mRNA distributions in generalized switching models for stochastic gene expression

Adam R. Stinchcombe, Charles S. Peskin, and Daniel Tranchina

Phys. Rev. E 85, 061919 (2012) - Published 22 June, 2012

Stochastic description of single nucleosome repositioning by ACF remodelers

Yves Vandecan and Ralf Blossey

Phys. Rev. E 85, 061920 (2012) - Published 22 June, 2012

Contributions to membrane-embedded-protein diffusion beyond hydrodynamic theories

Brian A. Camley and Frank L. H. Brown

Phys. Rev. E 85, 061921 (2012) - Published 25 June, 2012

Vesicle dynamics under weak flows: Application to large excess area

Alexander Farutin, Othmane Aouane, and Chaouqi Misbah

Phys. Rev. E 85, 061922 (2012) - Published 25 June, 2012

Effective-medium theory of elastic waves in random networks of rods

J. I. Katz, J. J. Hoffman, M. S. Conradi, and J. G. Miller

Phys. Rev. E 85, 061923 (2012) - Published 25 June, 2012

Clonal selection prevents tragedy of the commons when neighbors compete in a rock-paper-scissors game

Jeppe Juul, Kim Sneppen, and Joachim Mathiesen

Phys. Rev. E 85, 061924 (2012) - Published 26 June, 2012

Distribution of counterions and interaction between two similarly charged dielectric slabs: Roles of charge discreteness and dielectric inhomogeneity

Weria Pezeshkian, Narges Nikoofard, Davood Norouzi, Farshid Mohammad-Rafiee, and Hossein Fazli

Phys. Rev. E 85, 061925 (2012) - Published 28 June, 2012

Network-of-queues approach to B-cell-receptor affinity discrimination

Federico Felizzi and Federico Comoglio

Phys. Rev. E 85, 061926 (2012) - Published 28 June, 2012

Molecular spiders on a plane

Tibor Antal and P. L. Krapivsky

Phys. Rev. E 85, 061927 (2012) - Published 29 June, 2012

BRIEF REPORTS

Statistical physics

Critical points of the O( $n$ ) loop model on the martini and the 3-12 lattices

Chengxiang Ding, Zhe Fu, and Wenan Guo

Phys. Rev. E 85, 062101 (2012) - Published 19 June, 2012

Avoiding dark states in open quantum systems by tailored initializations

P. Schijven and O. Mülken

Phys. Rev. E 85, 062102 (2012) - Published 25 June, 2012

Nonequilibrium phase transitions and violent relaxation in the Hamiltonian mean-field model

T. M. Rocha Filho, M. A. Amato, and A. Figueiredo

Phys. Rev. E 85, 062103 (2012) - Published 28 June, 2012

Structured and complex fluids

Computational evidence of two driving mechanisms for overcharging in an electric double layer near the point of zero charge

Zhi-yong Wang and Yu-qiang Ma

Phys. Rev. E 85, 062501 (2012) - Published 5 June, 2012

Biological physics

Selective adsorption of lattice peptides on patterned surfaces

Adam Swetnam and Michael P. Allen

Phys. Rev. E 85, 062901 (2012) - Published 14 June, 2012

RAPID COMMUNICATIONS

Chaos and pattern formation

RAPID COMMUNICATION

Detecting hidden nodes in complex networks from time series

Ri-Qi Su, Wen-Xu Wang, and Ying-Cheng Lai

Phys. Rev. E 85, 065201(R) (2012) - Published 29 June, 2012

Fluid dynamics

RAPID COMMUNICATION

Anomalous scaling and large-scale anisotropy in magnetohydrodynamic turbulence: Two-loop renormalization-group analysis of the Kazantsev-Kraichnan kinematic model

N. V. Antonov and N. M. Gulitskiy

Phys. Rev. E 85, 065301(R) (2012) - Published 1 June, 2012

Plasma physics

RAPID COMMUNICATION

Relativistic x-ray free-electron lasers in the quantum regime

Bengt Eliasson and P. K. Shukla

Phys. Rev. E 85, 065401(R) (2012) - Published 20 June, 2012

ARTICLES

Interdisciplinary physics

Time-varying priority queuing models for human dynamics

Hang-Hyun Jo, Raj Kumar Pan, and Kimmo Kaski

Phys. Rev. E 85, 066101 (2012) - Published 4 June, 2012

Chasing and escaping by three groups of species

Masahide Sato

Phys. Rev. E 85, 066102 (2012) - Published 5 June, 2012

Range-limited centrality measures in complex networks

Mária Ercsey-Ravasz, Ryan N. Lichtenwalter, Nitesh V. Chawla, and Zoltán Toroczkai

Phys. Rev. E 85, 066103 (2012) - Published 6 June, 2012

Expectation-driven migration promotes cooperation by group interactions

Te Wu, Feng Fu, Yanling Zhang, and Long Wang

Phys. Rev. E 85, 066104 (2012) - Published 6 June, 2012

Error and attack vulnerability of temporal networks

S. Trajanovski, S. Scellato, and I. Leontiadis

Phys. Rev. E 85, 066105 (2012) - Published 6 June, 2012

Model reduction for agent-based social simulation: Coarse-graining a civil violence model

Yu Zou, Vladimir A. Fonoberov, Maria Fonoberova, Igor Mezic, and Ioannis G. Kevrekidis

Phys. Rev. E 85, 066106 (2012) - Published 8 June, 2012

Quantifying the complexity of random Boolean networks

Xinwei Gong and Joshua E. S. Socolar

Phys. Rev. E 85, 066107 (2012) - Published 8 June, 2012

Universal relation between skewness and kurtosis in complex dynamics

Matthieu Cristelli, Andrea Zaccaria, and Luciano Pietronero

Phys. Rev. E 85, 066108 (2012) - Published 8 June, 2012

Epidemics on interconnected networks

Mark Dickison, S. Havlin, and H. E. Stanley

Phys. Rev. E 85, 066109 (2012) - Published 8 June, 2012

Features and heterogeneities in growing network models

Luca Ferretti, Michele Cortelezzi, Bin Yang, Giacomo Marmorini, and Ginestra Bianconi

Phys. Rev. E 85, 066110 (2012) - Published 8 June, 2012

Spread of infectious diseases in directed and modular metapopulation networks

Hartmut H. K. Lentz, Thomas Selhorst, and Igor M. Sokolov

Phys. Rev. E 85, 066111 (2012) - Published 11 June, 2012

Analytical models for well-mixed populations of cooperators and defectors under limiting resources

R. J. Requejo and J. Camacho

Phys. Rev. E 85, 066112 (2012) - Published 11 June, 2012

Opinion group formation and dynamics: Structures that last from nonlasting entities

Sébastian Grauwin and Pablo Jensen

Phys. Rev. E 85, 066113 (2012) - Published 11 June, 2012

Community identification in networks with unbalanced structure

Shuqin Zhang and Hongyu Zhao

Phys. Rev. E 85, 066114 (2012) - Published 13 June, 2012

Nonperturbative model for wrinkling in highly bendable sheets

B. Davidovitch, R. D. Schroll, and E. Cerda

Phys. Rev. E 85, 066115 (2012) - Published 13 June, 2012

Eigenvalue spectra of asymmetric random matrices for multicomponent neural networks

Yi Wei

Phys. Rev. E 85, 066116 (2012) - Published 15 June, 2012

Fragmentation transitions in multistate voter models

Gesa A. Böhme and Thilo Gross

Phys. Rev. E 85, 066117 (2012) - Published 15 June, 2012

Communities and bottlenecks: Trees and treelike networks have high modularity

James P. Bagrow

Phys. Rev. E 85, 066118 (2012) - Published 15 June, 2012

Existence and significance of communities in the World Trade Web

Carlo Piccardi and Lucia Tajoli

Phys. Rev. E 85, 066119 (2012) - Published 18 June, 2012

Self-similar solutions to a density-dependent reaction-diffusion model

Waipot Ngamsaad and Kannika Khompurngson

Phys. Rev. E 85, 066120 (2012) - Published 18 June, 2012

Analysis of power-law exponents by maximum-likelihood maps

Jordi Baró and Eduard Vives

Phys. Rev. E 85, 066121 (2012) - Published 19 June, 2012

Complex networks in the Euclidean space of communicability distances

Ernesto Estrada

Phys. Rev. E 85, 066122 (2012) - Published 19 June, 2012

Locating privileged spreaders on an online social network

Javier Borge-Holthoefer, Alejandro Rivero, and Yamir Moreno

Phys. Rev. E 85, 066123 (2012) - Published 19 June, 2012

Detecting correlations among functional-sequence motifs

Davide Pirino, Jacopo Rigosa, Alice Ledda, and Luca Ferretti

Phys. Rev. E 85, 066124 (2012) - Published 19 June, 2012

Rare-region effects in the contact process on networks

Róbert Juhász, Géza Ódor, Claudio Castellano, and Miguel A. Muñoz

Phys. Rev. E 85, 066125 (2012) - Published 20 June, 2012

Analytical approach to the model of scientific revolutions

Paweł Kondratiuk, Grzegorz Siudem, and Janusz A. Hołyst

Phys. Rev. E 85, 066126 (2012) - Published 20 June, 2012

Measures of centrality based on the spectrum of the Laplacian

Scott D. Pauls and Daniel Remondini

Phys. Rev. E 85, 066127 (2012) - Published 20 June, 2012

Quantitative analysis of pedestrian counterflow in a cellular automaton model

Stefan Nowak and Andreas Schadschneider

Phys. Rev. E 85, 066128 (2012) - Published 21 June, 2012

Time-dependent wave selection for information processing in excitable media

William M. Stevens, Andrew Adamatzky, Ishrat Jahan, and Ben de Lacy Costello

Phys. Rev. E 85, 066129 (2012) - Published 26 June, 2012

Enhancing network robustness against malicious attacks

An Zeng and Weiping Liu

Phys. Rev. E 85, 066130 (2012) - Published 27 June, 2012

Statistical properties of avalanches in networks

Daniel B. Larremore, Marshall Y. Carpenter, Edward Ott, and Juan G. Restrepo

Phys. Rev. E 85, 066131 (2012) - Published 28 June, 2012

Regulation of Turing patterns in a spatially extended chlorine–iodine–malonic-acid system with a local concentration-dependent diffusivity

Wei-Shen Li, Wen-Yong Hu, Ya-Chun Pang, Tai-Ran Liu, Wei-Rong Zhong, and Yuan-Zhi Shao

Phys. Rev. E 85, 066132 (2012) - Published 28 June, 2012

Impact of generalized benefit functions on the evolution of cooperation in spatial public goods games with continuous strategies

Xiaojie Chen, Attila Szolnoki, Matjaž Perc, and Long Wang

Phys. Rev. E 85, 066133 (2012) - Published 29 June, 2012

Robustness of a network formed by $n$ interdependent networks with a one-to-one correspondence of dependent nodes

Jianxi Gao, S. V. Buldyrev, S. Havlin, and H. E. Stanley

Phys. Rev. E 85, 066134 (2012) - Published 29 June, 2012

Chaos and pattern formation

One-dimensional lattice of oscillators coupled through power-law interactions: Continuum limit and dynamics of spatial Fourier modes

Shamik Gupta, Max Potters, and Stefano Ruffo

Phys. Rev. E 85, 066201 (2012) - Published 4 June, 2012

Width of the chaotic layer: Maxima due to marginal resonances

Ivan I. Shevchenko

Phys. Rev. E 85, 066202 (2012) - Published 4 June, 2012

Synchronization of many nanomechanical resonators coupled via a common cavity field

C. A. Holmes, C. P. Meaney, and G. J. Milburn

Phys. Rev. E 85, 066203 (2012) - Published 5 June, 2012

Transient features of quantum open maps

Leonardo Ermann, Gabriel G. Carlo, Juan M. Pedrosa, and Marcos Saraceno

Phys. Rev. E 85, 066204 (2012) - Published 6 June, 2012

Delayed double ionization as a signature of Hamiltonian chaos

F. Mauger, A. Kamor, C. Chandre, and T. Uzer

Phys. Rev. E 85, 066205 (2012) - Published 15 June, 2012

Generation of polygonal soliton clusters and fundamental solitons in dissipative systems by necklace-ring beams with radial-azimuthal phase modulation

Yingji He, Dumitru Mihalache, Boris A. Malomed, Yunli Qiu, Zhanxu Chen, and Yifang Li

Phys. Rev. E 85, 066206 (2012) - Published 20 June, 2012

Impulse-induced optimum control of escape from a metastable state by periodic secondary excitations

R. Chacón, J. A. Martínez, and J. J. Miralles

Phys. Rev. E 85, 066207 (2012) - Published 20 June, 2012

Synchronous patterns in complex systems

Chenbo Fu, Hong Zhang, Meng Zhan, and Xingang Wang

Phys. Rev. E 85, 066208 (2012) - Published 25 June, 2012

Frequency structure of the nonlinear instability of a dragged viscous thread

Robert L. Welch, Billy Szeto, and Stephen W. Morris

Phys. Rev. E 85, 066209 (2012) - Published 26 June, 2012

Biased diffusion inside regular islands under random symplectic perturbations

Alexandra Kruscha, Roland Ketzmerick, and Holger Kantz

Phys. Rev. E 85, 066210 (2012) - Published 28 June, 2012

Fluid dynamics

Anomalous coalescence in sheared two-dimensional foam

Hadi Mohammadigoushki, Giovanni Ghigliotti, and James J. Feng

Phys. Rev. E 85, 066301 (2012) - Published 1 June, 2012

Time-dependent Poiseuille flow of a viscous compressible fluid confined between two planar walls with dynamic partial slip boundary condition

B. U. Felderhof

Phys. Rev. E 85, 066302 (2012) - Published 4 June, 2012

Analytical approximations for the collapse of an empty spherical bubble

D. Obreschkow, M. Bruderer, and M. Farhat

Phys. Rev. E 85, 066303 (2012) - Published 5 June, 2012

Low-Reynolds-number swimmer utilizing surface traveling waves: Analytical and experimental study

E. Setter, I. Bucher, and S. Haber

Phys. Rev. E 85, 066304 (2012) - Published 5 June, 2012

Instabilities in a horizontal liquid layer in cocurrent gas flow with an evaporating interface

R. Liu and O. A. Kabov

Phys. Rev. E 85, 066305 (2012) - Published 5 June, 2012

Onset of convective instabilities in under-ice melt ponds

Sílvia C. Hirata, Benoît Goyeau, and Dominique Gobin

Phys. Rev. E 85, 066306 (2012) - Published 8 June, 2012

Shock velocity increase due to a heterogeneity produced by a two-gas layer

Déborah Elbaz, Georges Jourdan, Lazhar Houas, Stéphane Jaouen, Philippe Ballereau, Frédéric Dias, and Benoit Canaud

Phys. Rev. E 85, 066307 (2012) - Published 11 June, 2012

Laminar-turbulent cycles in inclined lock-exchange flows

Yukie Tanino, Frédéric Moisy, and Jean-Pierre Hulin

Phys. Rev. E 85, 066308 (2012) - Published 11 June, 2012

Nonlinear dynamic behavior of microscopic bubbles near a rigid wall

Sergey A. Suslov, Andrew Ooi, and Richard Manasseh

Phys. Rev. E 85, 066309 (2012) - Published 12 June, 2012

Hydrodynamic drag-force measurement and slip length on microstructured surfaces

A. Maali, Y. Pan, B. Bhushan, and E. Charlaix

Phys. Rev. E 85, 066310 (2012) - Published 14 June, 2012

Decay of capillary wave turbulence

Luc Deike, Michael Berhanu, and Eric Falcon

Phys. Rev. E 85, 066311 (2012) - Published 18 June, 2012

Structure of drying fronts in three-dimensional porous media

Nima Shokri and Muhammad Sahimi

Phys. Rev. E 85, 066312 (2012) - Published 18 June, 2012

Examination of the four-fifths law for longitudinal third-order moments in incompressible magnetohydrodynamic turbulence in a periodic box

Katsunori Yoshimatsu

Phys. Rev. E 85, 066313 (2012) - Published 19 June, 2012

Influence of an inhomogeneous internal magnetic field on the flow dynamics of a ferrofluid between differentially rotating cylinders

S. Altmeyer, Younghae Do, and J. M. Lopez

Phys. Rev. E 85, 066314 (2012) - Published 19 June, 2012

Role of large-scale velocity fluctuations in a two-vortex kinematic dynamo

E. J. Kaplan, B. P. Brown, K. Rahbarnia, and C. B. Forest

Phys. Rev. E 85, 066315 (2012) - Published 20 June, 2012

Transport in fractal media: An effective scale-invariant approach

H. Hernandez-Coronado, M. Coronado, and E. C. Herrera-Hernandez

Phys. Rev. E 85, 066316 (2012) - Published 20 June, 2012

Renormalization and universality of blowup in hydrodynamic flows

Alexei A. Mailybaev

Phys. Rev. E 85, 066317 (2012) - Published 22 June, 2012

Nonmodal stability in Hagen-Poiseuille flow of a shear thinning fluid

Rong Liu and Qiu Sheng Liu

Phys. Rev. E 85, 066318 (2012) - Published 22 June, 2012

Band gaps and localization of surface water waves over large-scale sand waves with random fluctuations

Yu Zhang, Yan Li, Hao Shao, Yaozhao Zhong, Sai Zhang, and Zongxi Zhao

Phys. Rev. E 85, 066319 (2012) - Published 25 June, 2012

Observability of periodic lines in three-dimensional lid-driven cylindrical cavity flows

J. Znaien, M. F. M. Speetjens, R. R. Trieling, and H. J. H. Clercx

Phys. Rev. E 85, 066320 (2012) - Published 25 June, 2012

Tunable heat transfer with smart nanofluids

Michele Bernardin, Federico Comitani, and Alberto Vailati

Phys. Rev. E 85, 066321 (2012) - Published 26 June, 2012

Anomalous diffusion in confined turbulent convection

G. Boffetta, F. De Lillo, and S. Musacchio

Phys. Rev. E 85, 066322 (2012) - Published 27 June, 2012

Bounds for the number of degrees of freedom of incompressible magnetohydrodynamic turbulence in two and three dimensions

Chuong V. Tran and Xinwei Yu

Phys. Rev. E 85, 066323 (2012) - Published 28 June, 2012

Plasma physics

Cutoff wave number for shear waves and Maxwell relaxation time in Yukawa liquids

J. Goree, Z. Donkó, and P. Hartmann

Phys. Rev. E 85, 066401 (2012) - Published 11 June, 2012

Frequency-dependent shear viscosity of a liquid two-dimensional dusty plasma

Yan Feng, J. Goree, and Bin Liu

Phys. Rev. E 85, 066402 (2012) - Published 13 June, 2012

Collective vibration of discharge current filaments in a self-organized pattern within a dielectric barrier discharge

Lifang Dong, Jie Shang, Yafeng He, Zhanguo Bai, Liang Liu, and Weili Fan

Phys. Rev. E 85, 066403 (2012) - Published 18 June, 2012

Direct molecular dynamics simulation of liquid-solid phase equilibria for two-component plasmas

A. S. Schneider, J. Hughto, C. J. Horowitz, and D. K. Berry

Phys. Rev. E 85, 066405 (2012) - Published 20 June, 2012

Not much helicity is needed to drive large-scale dynamos

Jonathan Pietarila Graham, Eric G. Blackman, Pablo D. Mininni, and Annick Pouquet

Phys. Rev. E 85, 066406 (2012) - Published 20 June, 2012

Fluid-solid phase transitions in three-dimensional complex plasmas under microgravity conditions

S. A. Khrapak, B. A. Klumov, P. Huber, V. I. Molotkov, A. M. Lipaev, V. N. Naumkin, A. V. Ivlev, H. M. Thomas, M. Schwabe, G. E. Morfill, O. F. Petrov, V. E. Fortov, Yu. Malentschenko, and S. Volkov

Phys. Rev. E 85, 066407 (2012) - Published 20 June, 2012

Shear flow instability in a strongly coupled dusty plasma

D. Banerjee, M. S. Janaki, and N. Chakrabarti

Phys. Rev. E 85, 066408 (2012) - Published 26 June, 2012

Intergrain forces in low-Mach-number plasma wakes

I. H. Hutchinson

Phys. Rev. E 85, 066409 (2012) - Published 28 June, 2012

Classical physics

Second-order nonlinear Schrödinger equation breather solutions in the degenerate and rogue wave limits

David J. Kedziora, Adrian Ankiewicz, and Nail Akhmediev

Phys. Rev. E 85, 066601 (2012) - Published 4 June, 2012

Simple waves in Hertzian chains

B. Edward McDonald and David Calvo

Phys. Rev. E 85, 066602 (2012) - Published 4 June, 2012

Homogenization of Maxwell's equations in periodic composites: Boundary effects and dispersion relations

Vadim A. Markel and John C. Schotland

Phys. Rev. E 85, 066603 (2012) - Published 4 June, 2012

Nonlinear absorption due to linear loss and magnetic permeability in metamaterials

Yuanjiang Xiang, Xiaoyu Dai, Shuangchun Wen, and Jun Guo

Phys. Rev. E 85, 066604 (2012) - Published 5 June, 2012

Elasticity of mechanical oscillators in nonequilibrium steady states: Experimental, numerical, and theoretical results

Livia Conti, Paolo De Gregorio, Michele Bonaldi, Antonio Borrielli, Michele Crivellari, Gagik Karapetyan, Charles Poli, Enrico Serra, Ram-Krishna Thakur, and Lamberto Rondoni

Phys. Rev. E 85, 066605 (2012) - Published 11 June, 2012

Mixed convolved action

G. F. Dargush and J. Kim

Phys. Rev. E 85, 066606 (2012) - Published 19 June, 2012

Computational physics

Numerical convergence of the self-diffusion coefficient and viscosity obtained with Thomas-Fermi-Dirac molecular dynamics

J.-F. Danel, L. Kazandjian, and G. Zérah

Phys. Rev. E 85, 066701 (2012) - Published 4 June, 2012

Free-energy calculation via mean-force dynamics using a logarithmic energy landscape

Tetsuya Morishita, Satoru G. Itoh, Hisashi Okumura, and Masuhiro Mikami

Phys. Rev. E 85, 066702 (2012) - Published 11 June, 2012

Optimization of a Brownian-dynamics algorithm for semidilute polymer solutions

Aashish Jain, P. Sunthar, B. Dünweg, and J. Ravi Prakash

Phys. Rev. E 85, 066703 (2012) - Published 11 June, 2012

Direct numerical simulation of dispersed particles in a compressible fluid

Rei Tatsumi and Ryoichi Yamamoto

Phys. Rev. E 85, 066704 (2012) - Published 12 June, 2012

Modified unified kinetic scheme for all flow regimes

Sha Liu and Chengwen Zhong

Phys. Rev. E 85, 066705 (2012) - Published 13 June, 2012

Direct calculation of the lattice Green function with arbitrary interactions for general crystals

Joseph A. Yasi and Dallas R. Trinkle

Phys. Rev. E 85, 066706 (2012) - Published 14 June, 2012

Generalized Metropolis dynamics with a generalized master equation: An approach for time-independent and time-dependent Monte Carlo simulations of generalized spin systems

Roberto da Silva, José Roberto Drugowich de Felício, and Alexandre Souto Martinez

Phys. Rev. E 85, 066707 (2012) - Published 14 June, 2012

Discrete differential geometry: The nonplanar quadrilateral mesh

Carole J. Twining and Stephen Marsland

Phys. Rev. E 85, 066708 (2012) - Published 27 June, 2012

Reconstruction of three-dimensional porous media using a single thin section

Pejman Tahmasebi and Muhammad Sahimi

Phys. Rev. E 85, 066709 (2012) - Published 29 June, 2012

BRIEF REPORTS

Interdisciplinary physics

Velocity-enhanced cooperation of moving agents playing public goods games

Alessio Cardillo, Sandro Meloni, Jesús Gómez-Gardeñes, and Yamir Moreno

Phys. Rev. E 85, 067101 (2012) - Published 18 June, 2012

Fluid dynamics

Addendum to “Two-fluid confined flow in a cylinder driven by a rotating endwall”

P. T. Brady, M. Herrmann, and J. M. Lopez

Phys. Rev. E 85, 067301 (2012) - Published 26 June, 2012

Classical physics

Acoustic vector solitons

G. T. Adamashvili

Phys. Rev. E 85, 067601 (2012) - Published 25 June, 2012

Computational physics

State-space-split method for some generalized Fokker-Planck-Kolmogorov equations in high dimensions

Guo-Kang Er and Vai Pan Iu

Phys. Rev. E 85, 067701 (2012) - Published 20 June, 2012

ERRATA

Erratum: Three-dimensional lattice Boltzmann model for immiscible two-phase flow simulations [Phys. Rev. E 85, 046309 (2012)]

Haihu Liu, Albert J. Valocchi, and Qinjun Kang

Phys. Rev. E 85, 069901 (2012) - Published 4 June, 2012

Publisher's Note: Nanoelectromechanical devices in a fluidic environment [Phys. Rev. E 85, 056313 (2012)]

Oleksiy Svitelskiy, Vince Sauer, Douglass Vick, Kar-Mun Cheng, Ning Liu, Mark R. Freeman, and Wayne K. Hiebert

Phys. Rev. E 85, 069902 (2012) - Published 7 June, 2012

Publisher’s Note: Community identification in networks with unbalanced structure [Phys. Rev. E 85, 066114 (2012)]

Shuqin Zhang and Hongyu Zhao

Phys. Rev. E 85, 069903 (2012) - Published 25 June, 2012