HIGHLIGHTED ARTICLES

Emergence of social phases in human movement

Yi Zhang, Debasish Sarker, Samantha Mitsven, Lynn Perry, Daniel Messinger, Udo Rudolph, Michael Siller, and Chaoming Song

Phys. Rev. E 110, 044303 (2024) - Published 3 October, 2024

Ultra-wideband radio frequency identification technology was used to collect spatiotemporal data on movements in four different classroom and playground settings. The data explore predominantly low-speed regimes, which may be affected by strong social interactions. Two distinct phases were observed at different speeds: (i) a gas-like phase where individuals move freely and (ii) a liquid-vapor phase where individuals form small social groups, with free-moving individuals entering and exiting these groups.

Point-cloud clustering and tracking algorithm for radar interferometry

Magnus F. Ivarsen, Jean-Pierre St-Maurice, Glenn C. Hussey, Devin R. Huyghebaert, and Megan D. Gillies

Phys. Rev. E 110, 045207 (2024) - Published 22 October, 2024

Applying data mining tools to a rich observational dataset has enabled researchers to track the turbulent plasma clouds that accompany the aurora.

Resetting by rescaling: Exact results for a diffusing particle in one dimension

Marco Biroli, Yannick Feld, Alexander K. Hartmann, Satya N. Majumdar, and Grégory Schehr

Phys. Rev. E 110, 044142 (2024) - Published 28 October, 2024

This work studies resetting by stochastically rescaling the current position by a positive or negative factor. In a model for a diffusing particle in one dimension, the authors find that positive rescaling is not beneficial for the search, but that negative rescaling, rescaling followed by a reflection around the origin, expedites the search.

Network modulation at stable states

Ben Collins, Jason Shulman, Ethan Speakman, Hailey Martin, Jennifer Reiss, Jennifer Myers, Gregg Roman, and Gemunu H. Gunaratne

Phys. Rev. E 110, 044407 (2024) - Published 28 October, 2024

Transcriptional networks regulating gene-gene interactions are composed of large numbers of nodes whose precise interactions are unknown, making it a challenge to build models that can reliably capture the underlying processes. Here, the authors present model-independent relationships to understand how external inputs affect the network’s stable equilibrium state, finding that the change in the resulting state is much smaller than the initial perturbation, a phenomenon termed network modulation.

Comparison of integral equation theories of the liquid state

Ilian Pihlajamaa and Liesbeth M. C. Janssen

Phys. Rev. E 110, 044608 (2024) - Published 28 October, 2024

The authors perform a comprehensive investigation including fifteen different closures for four different intermolecular potentials, providing both theoretical predictions and Monte Carlo simulation results. The study represents a useful go-to place for researchers interested in analytical description of liquids.

Magnetic levitation in the field of a rotating dipole

Grégoire Le Lay, Sarah Layani, Adrian Daerr, Michael Berhanu, Rémy Dolbeault, Till Person, Hugo Roussille, and Nicolas Taberlet

Phys. Rev. E 110, 045003 (2024) - Published 28 October, 2024

This study presents an analytical model to describe the magnetic levitation of a magnetic dipole suspended below another magnetic dipole rotating at a given frequency. Thanks to the model and experimental validation, the authors are able to obtain relevant parameters to describe the phenomenon, such as the trapping distance, the tilt angle and the rotational frequency needed to sustaining levitation.

Amoeba Monte Carlo algorithms for random trees with controlled branching activity: Efficient trial move generation and universal dynamics

Pieter H. W. van der Hoek, Angelo Rosa, and Ralf Everaers

Phys. Rev. E 110, 045312 (2024) - Published 28 October, 2024

Simulating ensembles of branched macromolecules with annealed branches and statistically-controlled branching weights has been a long-standing challenge. The authors present a new algorithm for simulating random trees, advancing the computational theory of randomly branched polymers.

Skyrmion flow in periodically modulated channels

Klaus Raab, Maurice Schmitt, Maarten A. Brems, Jan Rothörl, Fabian Kammerbauer, Sachin Krishnia, Mathias Kläui, and Peter Virnau

Phys. Rev. E 110, L042601 (2024) - Published 25 October, 2024

Combining experiments and particle-based simulations, the authors investigate the rheological properties and flow dynamics of magnetic skyrmions in a channel. They show that boundary conditions influence the flow of these quasiparticles, and point at the similarities between skyrmions and other macroscopic particles, like colloids. This hints at the possibility of using skyrmions as a model system to understand transport properties in other physical systems.

SWAP algorithm for lattice spin models

Greivin Alfaro Miranda, Leticia F. Cugliandolo, and Marco Tarzia

Phys. Rev. E 110, L043301 (2024) - Published 28 October, 2024

Both structural and spin glasses are notoriously hard to simulate due to their slow dynamics. The authors adapt the SWAP algorithm, first introduced for structural glasses, to the case of lattice Ising spin models. The algorithm allows to sample ground states of an Ising spin glass with little numerical effort.

PERSPECTIVES

Statistical physics and dynamical systems perspectives on geophysical extreme events

D. Faranda, G. Messori, T. Alberti, C. Alvarez-Castro, T. Caby, L. Cavicchia, E. Coppola, R. V. Donner, B. Dubrulle, V. M. Galfi, E. Holmberg, V. Lembo, R. Noyelle, P. Yiou, B. Spagnolo, D. Valenti, S. Vaienti, and C. Wormell

Phys. Rev. E 110, 041001 (2024) - Published 4 October, 2024

Statistical physics and dynamical systems theory are key tools to study extreme events in the Earth system. This perspective bridges the gap between statistical approaches, dynamical features, and the underlying geophysical phenomena, highlighting new formalisms, showcasing applications to real-life problems, and presenting some challenges and future directions.

LETTERS

Statistical Physics

Search with stochastic home returns can expedite classical first passage under resetting

Arup Biswas, Anupam Kundu, and Arnab Pal

Phys. Rev. E 110, L042101 (2024) - Published 7 October, 2024

Minimum-dissipation principle for synchronized stochastic oscillators far from equilibrium

Jan Meibohm and Massimiliano Esposito

Phys. Rev. E 110, L042102 (2024) - Published 15 October, 2024

Statistical properties of microphase and bubbly phase-separated active fluids

Giordano Fausti, Michael E. Cates, and Cesare Nardini

Phys. Rev. E 110, L042103 (2024) - Published 22 October, 2024

Relation between critical exponent of the conductivity and the morphological exponents of percolation theory

Carl Fredrik Berg and Muhammad Sahimi

Phys. Rev. E 110, L042104 (2024) - Published 24 October, 2024

Optimal control theory for maximum power of Brownian heat engines

Jin-Fu Chen and H. T. Quan

Phys. Rev. E 110, L042105 (2024) - Published 30 October, 2024

Networks and Complex Systems

Reconstructing networks from simple and complex contagions

Nicholas W. Landry, William Thompson, Laurent Hébert-Dufresne, and Jean-Gabriel Young

Phys. Rev. E 110, L042301 (2024) - Published 7 October, 2024

Colloids, Complex Fluids, and Active Matter

Skyrmion flow in periodically modulated channels

Klaus Raab, Maurice Schmitt, Maarten A. Brems, Jan Rothörl, Fabian Kammerbauer, Sachin Krishnia, Mathias Kläui, and Peter Virnau

Phys. Rev. E 110, L042601 (2024) - Published 25 October, 2024

Combining experiments and particle-based simulations, the authors investigate the rheological properties and flow dynamics of magnetic skyrmions in a channel. They show that boundary conditions influence the flow of these quasiparticles, and point at the similarities between skyrmions and other macroscopic particles, like colloids. This hints at the possibility of using skyrmions as a model system to understand transport properties in other physical systems.

Fluid Dynamics

Turbulent cascade arrests and the formation of intermediate-scale condensates

Kolluru Venkata Kiran, Dario Vincenzi, and Rahul Pandit

Phys. Rev. E 110, L043101 (2024) - Published 7 October, 2024

Computational Physics

SWAP algorithm for lattice spin models

Greivin Alfaro Miranda, Leticia F. Cugliandolo, and Marco Tarzia

Phys. Rev. E 110, L043301 (2024) - Published 28 October, 2024

Both structural and spin glasses are notoriously hard to simulate due to their slow dynamics. The authors adapt the SWAP algorithm, first introduced for structural glasses, to the case of lattice Ising spin models. The algorithm allows to sample ground states of an Ising spin glass with little numerical effort.

ARTICLES

Statistical Physics

Model for random internalization of nanoparticles by cells

Sergei Fedotov and Dmitri V. Alexandrov

Phys. Rev. E 110, 044101 (2024) - Published 1 October, 2024

Geometric thermodynamics of collapse of gels

Asif Raza, Sanhita Das, and Debasish Roy

Phys. Rev. E 110, 044102 (2024) - Published 1 October, 2024

Network analysis for the steady-state thermodynamic uncertainty relation

Yasuhiro Utsumi

Phys. Rev. E 110, 044103 (2024) - Published 1 October, 2024

Statistical formulation of the Onsager-Machlup variational principle

Kento Yasuda, Kenta Ishimoto, and Shigeyuki Komura

Phys. Rev. E 110, 044104 (2024) - Published 2 October, 2024

Fate of Boltzmann's breathers: Kinetic theory perspective

P. Maynar, M. I. García de Soria, David Guéry-Odelin, and Emmanuel Trizac

Phys. Rev. E 110, 044105 (2024) - Published 3 October, 2024

Herd behavior in public goods games

María Pereda

Phys. Rev. E 110, 044106 (2024) - Published 4 October, 2024

Harmonically trapped inertial run-and-tumble particle in one dimension

Debraj Dutta, Anupam Kundu, Sanjib Sabhapandit, and Urna Basu

Phys. Rev. E 110, 044107 (2024) - Published 4 October, 2024

Stochastic thermodynamics of Brownian motion in a flowing fluid

Jun Wu, Mingnan Ding, and Xiangjun Xing

Phys. Rev. E 110, 044108 (2024) - Published 7 October, 2024

Power dissipation and entropy production rate of high-dimensional optical matter systems

Shiqi Chen, Emmanuel Valenton, Grant M. Rotskoff, Andrew L. Ferguson, Stuart A. Rice, and Norbert F. Scherer

Phys. Rev. E 110, 044109 (2024) - Published 7 October, 2024

Nonequilibrium spin transport in integrable and nonintegrable classical spin chains

Dipankar Roy, Abhishek Dhar, Herbert Spohn, and Manas Kulkarni

Phys. Rev. E 110, 044110 (2024) - Published 8 October, 2024

Decorrelation of a leader by an increasing number of followers

Satya N. Majumdar and Grégory Schehr

Phys. Rev. E 110, 044111 (2024) - Published 8 October, 2024

Parameter estimation from an Ornstein-Uhlenbeck process with measurement noise

Simon Carter, Lilianne R. Mujica-Parodi, and Helmut H. Strey

Phys. Rev. E 110, 044112 (2024) - Published 9 October, 2024

Small-amplitude synchronization in driven Potts models

Jan Meibohm and Massimiliano Esposito

Phys. Rev. E 110, 044114 (2024) - Published 15 October, 2024

Lattice model for percolation on a plane of partially aligned sticks with length dispersity

Avik P. Chatterjee and Yuri Yu. Tarasevich

Phys. Rev. E 110, 044115 (2024) - Published 15 October, 2024

Rényi entanglement entropy of a spin chain with generative neural networks

Piotr Białas, Piotr Korcyl, Tomasz Stebel, and Dawid Zapolski

Phys. Rev. E 110, 044116 (2024) - Published 15 October, 2024

Collapses and revivals of spin polarization quantum oscillations in two-dimensional systems of spin 1/2 charged particles with spin-orbit interaction

N. S. Maslova, V. N. Mantsevich, I. M. Sokolov, and P. I. Arseyev

Phys. Rev. E 110, 044117 (2024) - Published 15 October, 2024

Pseudotransitions in a dilute Ising chain

Darya Yasinskaya and Yury Panov

Phys. Rev. E 110, 044118 (2024) - Published 16 October, 2024

Sensitivity analysis of colored-noise-driven interacting particle systems

Josselin Garnier, Harry L. F. Ip, and Laurent Mertz

Phys. Rev. E 110, 044119 (2024) - Published 17 October, 2024

Catalytic enhancement in the performance of the microscopic two-stroke heat engine

Tanmoy Biswas, Marcin Łobejko, Paweł Mazurek, and Michał Horodecki

Phys. Rev. E 110, 044120 (2024) - Published 17 October, 2024

Universality in long-range interacting systems: The effective dimension approach

Andrea Solfanelli and Nicolò Defenu

Phys. Rev. E 110, 044121 (2024) - Published 17 October, 2024

Phase transitions in the Ziff-Gulari-Barshad model operating on periodic conditions

M. Santos and Fernando A. Oliveira

Phys. Rev. E 110, 044122 (2024) - Published 17 October, 2024

Effective diffusion constant of stochastic processes with spatially periodic noise

Stefano Giordano and Ralf Blossey

Phys. Rev. E 110, 044123 (2024) - Published 17 October, 2024

Non-Hermitian diluted banded random matrices: Scaling of eigenfunction and spectral properties

M. Hernández-Sánchez, G. Tapia-Labra, and J. A. Méndez-Bermúdez

Phys. Rev. E 110, 044124 (2024) - Published 17 October, 2024

Hypergraph animals

Michael P. H. Stumpf

Phys. Rev. E 110, 044125 (2024) - Published 17 October, 2024

Dynamical properties of two coupled quantum cavities with single-mode amplification

V. Penna and F. A. Raffa

Phys. Rev. E 110, 044126 (2024) - Published 18 October, 2024

Onset of quantum thermalization in the Jahn-Teller model

Yoana R. Chorbadzhiyska and Peter A. Ivanov

Phys. Rev. E 110, 044127 (2024) - Published 21 October, 2024

Charged aggregation

P. L. Krapivsky and S. Redner

Phys. Rev. E 110, 044128 (2024) - Published 21 October, 2024

Image charge effects under metal and dielectric boundary conditions

Tingtao Zhou, Dorian Bruch, and Zhen-Gang Wang

Phys. Rev. E 110, 044129 (2024) - Published 21 October, 2024

Spectral energy transfers in domain growth problems

Pradeep Kumar Yadav, Mahendra Kumar Verma, and Sanjay Puri

Phys. Rev. E 110, 044130 (2024) - Published 22 October, 2024

Unified hierarchical relationship between thermodynamic tradeoff relations

Euijoon Kwon, Jong-Min Park, Jae Sung Lee, and Yongjoo Baek

Phys. Rev. E 110, 044131 (2024) - Published 22 October, 2024

Escape from a metastable state in non-Markovian population dynamics

Ohad Vilk and Michael Assaf

Phys. Rev. E 110, 044132 (2024) - Published 22 October, 2024

Numerical simulation of a two-dimensional Blume-Capel ferromagnet in an oscillating magnetic field with a constant bias

Celeste Mendes, Gloria M. Buendía, and Per Arne Rikvold

Phys. Rev. E 110, 044133 (2024) - Published 22 October, 2024

Dynamical signatures of discontinuous phase transitions: How phase coexistence determines exponential versus power-law scaling

Krzysztof Ptaszyński and Massimiliano Esposito

Phys. Rev. E 110, 044134 (2024) - Published 22 October, 2024

Effects of magnetic anisotropy on three-qubit antiferromagnetic thermal machines

Bastian Castorene, Francisco J. Peña, Ariel Norambuena, Sergio E. Ulloa, Cristobal Araya, and Patricio Vargas

Phys. Rev. E 110, 044135 (2024) - Published 23 October, 2024

Generalized Langevin dynamics for single beads in linear elastic networks

Soya Shinkai, Shuichi Onami, and Tomoshige Miyaguchi

Phys. Rev. E 110, 044136 (2024) - Published 23 October, 2024

Mean back relaxation for position and densities

Gabriel Knotz and Matthias Krüger

Phys. Rev. E 110, 044137 (2024) - Published 23 October, 2024

Unified approach to reset processes and application to coupling between process and reset

G. John Lapeyre, Jr., Tomás Aquino, and Marco Dentz

Phys. Rev. E 110, 044138 (2024) - Published 24 October, 2024

Generalized XY model with competing antiferromagnetic and antinematic interactions

Milan Žukovič

Phys. Rev. E 110, 044139 (2024) - Published 24 October, 2024

Interplay of the complete-graph and Gaussian fixed-point asymptotics in finite-size scaling of percolation above the upper critical dimension

Mingzhong Lu, Sheng Fang, Zongzheng Zhou, and Youjin Deng

Phys. Rev. E 110, 044140 (2024) - Published 28 October, 2024

Dynamics of a small quantum system open to a bath with thermostat

Chulan Kwon and Ju-Yeon Gyhm

Phys. Rev. E 110, 044141 (2024) - Published 28 October, 2024

Resetting by rescaling: Exact results for a diffusing particle in one dimension

Marco Biroli, Yannick Feld, Alexander K. Hartmann, Satya N. Majumdar, and Grégory Schehr

Phys. Rev. E 110, 044142 (2024) - Published 28 October, 2024

This work studies resetting by stochastically rescaling the current position by a positive or negative factor. In a model for a diffusing particle in one dimension, the authors find that positive rescaling is not beneficial for the search, but that negative rescaling, rescaling followed by a reflection around the origin, expedites the search.

Exploring noisy Jeffery orbits: A combined Fokker-Planck and Langevin analysis in two and three dimensions

J. Talbot, C. Antoine, P. Claudin, E. Somfai, and T. Börzsönyi

Phys. Rev. E 110, 044143 (2024) - Published 29 October, 2024

Absolute negative mobility of an inertial Brownian particle in an oscillating potential

Jian-Chun Wu, Feng Yang, Tian-Wen Dong, and Meng An

Phys. Rev. E 110, 044144 (2024) - Published 29 October, 2024

Fractional differentiation method: Some applications to the theory of subdiffusion-controlled reactions

Sergey D. Traytak

Phys. Rev. E 110, 044145 (2024) - Published 30 October, 2024

Size effect of accelerated seismic release from failures under compression in naturally fractured media

Rui Wu, Fuqiang Gao, Xiangyuan Peng, Shuangyong Dong, Shuwen Cao, and Bing Qiuyi Li

Phys. Rev. E 110, 044146 (2024) - Published 30 October, 2024

Nonlinear Dynamics and Chaos

Shearless effective barriers to chaotic transport induced by even twin islands in nontwist systems

M. Mugnaine, I. L. Caldas, J. D. Szezech, Jr., R. L. Viana, and P. J. Morrison

Phys. Rev. E 110, 044201 (2024) - Published 2 October, 2024

Fokker-Planck dynamics of two coupled van der Pol oscillators subjected to stochastic forcing

Minwoo Lee, Vikrant Gupta, and Larry K. B. Li

Phys. Rev. E 110, 044202 (2024) - Published 2 October, 2024

Energy-based theory of autoresonance in chains of coupled damped-driven generic oscillators

Ricardo Chacón, Faustino Palmero, Pedro J. Martínez, and Somnath Roy

Phys. Rev. E 110, 044203 (2024) - Published 2 October, 2024

Chimera-inspired dynamics: When higher-order interactions are expressed differently

Xinrui Ji and Xiang Li

Phys. Rev. E 110, 044204 (2024) - Published 4 October, 2024

Separable Hamiltonian neural networks

Zi-Yu Khoo, Dawen Wu, Jonathan Sze Choong Low, and Stéphane Bressan

Phys. Rev. E 110, 044205 (2024) - Published 11 October, 2024

Aubry transition with small distortions

O. Cépas and P. Quémerais

Phys. Rev. E 110, 044206 (2024) - Published 15 October, 2024

Influence of conduction heterogeneities on transient spatiotemporal chaos in cardiac excitable media

Melvin Dix, Thomas Lilienkamp, Stefan Luther, and Ulrich Parlitz

Phys. Rev. E 110, 044207 (2024) - Published 15 October, 2024

Sensitivity-analysis-guided Bayesian parameter estimation for neural mass models: Applications in epilepsy

Narayan Puthanmadam Subramaniyam and Jari Hyttinen

Phys. Rev. E 110, 044208 (2024) - Published 16 October, 2024

Rhythmic states and first-order phase transitions in adaptive coupled three-dimensional limit-cycle oscillators

Jiangsheng Wang, Changgui Gu, and Wei Zou

Phys. Rev. E 110, 044209 (2024) - Published 21 October, 2024

Classification of beating solitons, their physical spectra, and second-order nonlinear superpositions

Chong Liu, Wen-Juan Che, and Nail Akhmediev

Phys. Rev. E 110, 044210 (2024) - Published 21 October, 2024

Tipping in Stuart-Landau oscillators induced by higher-order repulsive interactions

Umesh Kumar Verma, Subhasanket Dutta, Richita Ghosh, Manish Dev Shrimali, and Sarika Jalan

Phys. Rev. E 110, 044211 (2024) - Published 22 October, 2024

Stochastic response analysis of a birhythmic oscillator under Poisson white noise excitation via path integration method

Wenting Zhang, Wei Xu, Yuanyuan Bai, Yaning Tang, and Jürgen Kurths

Phys. Rev. E 110, 044212 (2024) - Published 23 October, 2024

Wave dispersion in a damped beam supported by cubic nonlinear springs: A multiscale freewave approach

Abhigna Bhatt, Kamal K. Bera, and Arnab Banerjee

Phys. Rev. E 110, 044213 (2024) - Published 23 October, 2024

Bifurcation control and analysis of traffic flow model based on driver prediction effect

Wen-Huan Ai, Yi-Fan Zhang, Dan-Dan Xing, and Da-Wei Liu

Phys. Rev. E 110, 044214 (2024) - Published 24 October, 2024

Elastic and inelastic scattering of flat-top solitons

U. Al Khawaja, M. O. D. Alotaibi, and L. Al Sakkaf

Phys. Rev. E 110, 044215 (2024) - Published 31 October, 2024

Networks and Complex Systems

Multivariate opinion evolution analysis on individual opinion differences: An agent-based model

Shan Liu and Hanfei Zhao

Phys. Rev. E 110, 044301 (2024) - Published 1 October, 2024

Complex network-based multistep forecasting model for hyperchaotic time series

Reshmi L. B., Drisya Alex Thumba, K. Asokan, T. K. Manoj Kumar, T. R. Ramamohan, and K. Satheesh Kumar

Phys. Rev. E 110, 044302 (2024) - Published 3 October, 2024

Emergence of social phases in human movement

Yi Zhang, Debasish Sarker, Samantha Mitsven, Lynn Perry, Daniel Messinger, Udo Rudolph, Michael Siller, and Chaoming Song

Phys. Rev. E 110, 044303 (2024) - Published 3 October, 2024

Ultra-wideband radio frequency identification technology was used to collect spatiotemporal data on movements in four different classroom and playground settings. The data explore predominantly low-speed regimes, which may be affected by strong social interactions. Two distinct phases were observed at different speeds: (i) a gas-like phase where individuals move freely and (ii) a liquid-vapor phase where individuals form small social groups, with free-moving individuals entering and exiting these groups.

Countering adversarial perturbations in graphs using error correcting codes

Saif Eddin Jabari

Phys. Rev. E 110, 044304 (2024) - Published 15 October, 2024

Vulnerability of transport through evolving spatial networks

Ali Molavi, Hossein Hamzehpour, and Reza Shaebani

Phys. Rev. E 110, 044305 (2024) - Published 17 October, 2024

Critical short-time behavior of majority-vote model on scale-free networks

D. S. M. Alencar, J. F. S. Neto, T. F. A. Alves, F. W. S. Lima, R. S. Ferreira, G. A. Alves, and A. Macedo-Filho

Phys. Rev. E 110, 044306 (2024) - Published 17 October, 2024

Analytical solution of susceptible-infected-recovered models on homogeneous networks

Louis Bremaud, Olivier Giraud, and Denis Ullmo

Phys. Rev. E 110, 044307 (2024) - Published 17 October, 2024

Finding patient zero in susceptible-infectious-susceptible epidemic processes

Robin Persoons and Piet Van Mieghem

Phys. Rev. E 110, 044308 (2024) - Published 18 October, 2024

Antifragility of stochastic transport on networks with damage

L. K. Eraso-Hernandez and A. P. Riascos

Phys. Rev. E 110, 044309 (2024) - Published 21 October, 2024

Self-organized transport in noisy dynamic networks

Frederic Folz, Kurt Mehlhorn, and Giovanna Morigi

Phys. Rev. E 110, 044310 (2024) - Published 21 October, 2024

Theoretical framework for learning through structural plasticity

Gianmarco Tiddia, Luca Sergi, and Bruno Golosio

Phys. Rev. E 110, 044311 (2024) - Published 22 October, 2024

Thermodynamics of the Fredrickson-Andersen model on the Bethe lattice

Gianmarco Perrupato and Tommaso Rizzo

Phys. Rev. E 110, 044312 (2024) - Published 22 October, 2024

Threshold crossing time theory for quasicycles with application to brain rhythms

Mathias Roman, Ivan L'Heureux, Arthur Powanwe, and André Longtin

Phys. Rev. E 110, 044313 (2024) - Published 22 October, 2024

Modeling urbanization dynamics by labor force migration

Hirotaka Goto

Phys. Rev. E 110, 044314 (2024) - Published 23 October, 2024

Bayan algorithm: Detecting communities in networks through exact and approximate optimization of modularity

Samin Aref, Mahdi Mostajabdaveh, and Hriday Chheda

Phys. Rev. E 110, 044315 (2024) - Published 24 October, 2024

Biological Physics

Neuromodulatory effects on synchrony and network reorganization in networks of coupled Kuramoto oscillators

Sinan Aktay, Leonard M. Sander, and Michal Zochowski

Phys. Rev. E 110, 044401 (2024) - Published 3 October, 2024

Nonequilibrium microbial dynamics unveil a new macroecological pattern beyond Taylor's law

José Camacho-Mateu, Aniello Lampo, Saúl Ares, and José A. Cuesta

Phys. Rev. E 110, 044402 (2024) - Published 15 October, 2024

Multiphase field model of cells on a substrate: From three dimensional to two dimensional

Michael Chiang, Austin Hopkins, Benjamin Loewe, Davide Marenduzzo, and M. Cristina Marchetti

Phys. Rev. E 110, 044403 (2024) - Published 17 October, 2024

Accumulating waves of random mutations before fixation

Marius Moeller, Benjamin Werner, and Weini Huang

Phys. Rev. E 110, 044404 (2024) - Published 21 October, 2024

Likelihood-based inference, identifiability, and prediction using count data from lattice-based random walk models

Yihan Liu, David J. Warne, and Matthew J. Simpson

Phys. Rev. E 110, 044405 (2024) - Published 23 October, 2024

Hippocampal synchronization in a realistic CA1 neuron model

Alessandro Fiasconaro and Michele Migliore

Phys. Rev. E 110, 044406 (2024) - Published 25 October, 2024

Network modulation at stable states

Ben Collins, Jason Shulman, Ethan Speakman, Hailey Martin, Jennifer Reiss, Jennifer Myers, Gregg Roman, and Gemunu H. Gunaratne

Phys. Rev. E 110, 044407 (2024) - Published 28 October, 2024

Transcriptional networks regulating gene-gene interactions are composed of large numbers of nodes whose precise interactions are unknown, making it a challenge to build models that can reliably capture the underlying processes. Here, the authors present model-independent relationships to understand how external inputs affect the network’s stable equilibrium state, finding that the change in the resulting state is much smaller than the initial perturbation, a phenomenon termed network modulation.

Density estimation for ordinal biological sequences and its applications

Wei-Chia Chen, Juannan Zhou, and David M. McCandlish

Phys. Rev. E 110, 044408 (2024) - Published 30 October, 2024

Polymers

Free-energy landscape of a polymer in the presence of two nanofluidic entropic traps

James M. Polson and Matthew D. Kozma

Phys. Rev. E 110, 044501 (2024) - Published 1 October, 2024

Predicting protracted binding kinetics of polymers: Integral of first-passage times

Qiyun Tang, Yifan Huang, and Marcus Müller

Phys. Rev. E 110, 044502 (2024) - Published 1 October, 2024

Critical dynamics of the sol-gel transition studied using particle-tracking microrheology

Amane Endo, Yasuyuki Maki, and Masahiko Annaka

Phys. Rev. E 110, 044503 (2024) - Published 15 October, 2024

Colloids, Complex Fluids, and Active Matter

Low efficiency of Janus microswimmers as hydrodynamic mixers

Maximilian R. Bailey, Dmitry A. Fedosov, Federico Paratore, Fabio Grillo, Gerhard Gompper, and Lucio Isa

Phys. Rev. E 110, 044601 (2024) - Published 1 October, 2024

Deformation dynamics of an oil droplet into a crescent shape during intermittent motion

Sayaka Otani, Hiroaki Ito, Tomonori Nomoto, Masanori Fujinami, Jerzy Górecki, and Hiroyuki Kitahata

Phys. Rev. E 110, 044602 (2024) - Published 4 October, 2024

Time-correlation functions of stochastic three-sphere micromachines

Jun Li, Ziluo Zhang, Zhanglin Hou, Kento Yasuda, Linli He, and Shigeyuki Komura

Phys. Rev. E 110, 044603 (2024) - Published 17 October, 2024

Isotropic tensor fields in amorphous solids: Correlation functions of displacement and strain tensor fields

J. P. Wittmer and J. Baschnagel

Phys. Rev. E 110, 044604 (2024) - Published 17 October, 2024

Molecular modeling of odd viscoelastic fluids

Paweł Matus, Ruben Lier, and Piotr Surówka

Phys. Rev. E 110, 044605 (2024) - Published 18 October, 2024

Hybrid particle-phase field model and renormalized surface tension in dilute suspensions of nanoparticles

Alexandra J. Hardy, Abdallah Daddi-Moussa-Ider, and Elsen Tjhung

Phys. Rev. E 110, 044606 (2024) - Published 23 October, 2024

Potential effects on effective attraction between probes diffusing in colloidal crystal

Luhui Ning, Xiaoting Yu, Xue Zhang, Wei Liu, Ke Chen, Ning Zheng, Mingcheng Yang, and Peng Liu

Phys. Rev. E 110, 044607 (2024) - Published 23 October, 2024

Comparison of integral equation theories of the liquid state

Ilian Pihlajamaa and Liesbeth M. C. Janssen

Phys. Rev. E 110, 044608 (2024) - Published 28 October, 2024

The authors perform a comprehensive investigation including fifteen different closures for four different intermolecular potentials, providing both theoretical predictions and Monte Carlo simulation results. The study represents a useful go-to place for researchers interested in analytical description of liquids.

Anomalous diffusion of active Brownian particles in responsive elastic gels: Nonergodicity, non-Gaussianity, and distributions of trapping times

Koushik Goswami, Andrey G. Cherstvy, Aljaz Godec, and Ralf Metzler

Phys. Rev. E 110, 044609 (2024) - Published 29 October, 2024

Liquid Crystals

Non-nematicity of the filamentary phase in systems of hard minor circular arcs

Juan Pedro Ramírez González and Giorgio Cinacchi

Phys. Rev. E 110, 044701 (2024) - Published 15 October, 2024

Order-disorder behavior in the ferroelectric nematic phase investigated via Raman spectroscopy

Thomas Raistrick, Richard J. Mandle, Zhaopeng Zhang, Peter J. Tipping, and Helen F. Gleeson

Phys. Rev. E 110, 044702 (2024) - Published 15 October, 2024

Granular Materials

Avalanching behavior of magnetic granular mixtures

Cecily Sunday, Charles T. Pett, Adam Ben Youssef, Daisy Achiriloaie, Connor Churko, Daniel P. Lathrop, and Christine M. Hartzell

Phys. Rev. E 110, 044901 (2024) - Published 18 October, 2024

Effects of particle elongation on dense granular flows down a rough inclined plane

Jixiong Liu, Lu Jing, Thomas Pähtz, Yifei Cui, Gordon G. D. Zhou, and Xudong Fu

Phys. Rev. E 110, 044902 (2024) - Published 23 October, 2024

Solid Mechanics

Fracture process of composite materials in a spring network model

Haruka Noguchi and Satoshi Yukawa

Phys. Rev. E 110, 045001 (2024) - Published 1 October, 2024

Ductile and brittle yielding of athermal amorphous solids: A mean-field paradigm beyond the random-field Ising model

Jack T. Parley and Peter Sollich

Phys. Rev. E 110, 045002 (2024) - Published 15 October, 2024

Magnetic levitation in the field of a rotating dipole

Grégoire Le Lay, Sarah Layani, Adrian Daerr, Michael Berhanu, Rémy Dolbeault, Till Person, Hugo Roussille, and Nicolas Taberlet

Phys. Rev. E 110, 045003 (2024) - Published 28 October, 2024

This study presents an analytical model to describe the magnetic levitation of a magnetic dipole suspended below another magnetic dipole rotating at a given frequency. Thanks to the model and experimental validation, the authors are able to obtain relevant parameters to describe the phenomenon, such as the trapping distance, the tilt angle and the rotational frequency needed to sustaining levitation.

Fluid Dynamics

Enhanced speed of microswimmers adjacent to a rough surface

Deming Nie, Kai Zhang, and Jianzhong Lin

Phys. Rev. E 110, 045101 (2024) - Published 1 October, 2024

Anomalous mass diffusion in a binary mixture and Rayleigh-Bénard instability

A. Barletta and B. Straughan

Phys. Rev. E 110, 045102 (2024) - Published 1 October, 2024

Inertia onset in disordered porous media flow

Damian Śnieżek, Sahrish B. Naqvi, and Maciej Matyka

Phys. Rev. E 110, 045103 (2024) - Published 1 October, 2024

Hydrodynamic fluctuations near a Hopf bifurcation: Stochastic onset of vortex shedding behind a circular cylinder

Ryan M. McMullen and Michael A. Gallis

Phys. Rev. E 110, 045104 (2024) - Published 7 October, 2024

Plasma Physics

Theory of stability of self-sustaining dc discharges at inception with application to negative corona

P. G. C. Almeida, G. V. Naidis, and M. S. Benilov

Phys. Rev. E 110, 045201 (2024) - Published 3 October, 2024

Pump depletion and the Raman gap in ignition-scale plasmas

S. H. Cao, M. J. Rosenberg, A. A. Solodov, H. Wen, and C. Ren

Phys. Rev. E 110, 045202 (2024) - Published 15 October, 2024

Applications of a Rayleigh-Taylor model to direct-drive laser fusion

C. A. Thomas et al.

Phys. Rev. E 110, 045203 (2024) - Published 16 October, 2024

Relaxation of weakly collisional plasma: Continuous spectra, discrete eigenmodes, and the decay of echoes

Uddipan Banik and Amitava Bhattacharjee

Phys. Rev. E 110, 045204 (2024) - Published 17 October, 2024

Sideband growth rates for differentiable and discontinuous distribution functions

Mikael Tacu and Didier Bénisti

Phys. Rev. E 110, 045205 (2024) - Published 18 October, 2024

Electrostatic energy of solid binary ionic mixtures

A. A. Kozhberov

Phys. Rev. E 110, 045206 (2024) - Published 21 October, 2024

Point-cloud clustering and tracking algorithm for radar interferometry

Magnus F. Ivarsen, Jean-Pierre St-Maurice, Glenn C. Hussey, Devin R. Huyghebaert, and Megan D. Gillies

Phys. Rev. E 110, 045207 (2024) - Published 22 October, 2024

Applying data mining tools to a rich observational dataset has enabled researchers to track the turbulent plasma clouds that accompany the aurora.

Dense plasma opacity from excited states method

C. E. Starrett, C. J. Fontes, H. B. Tran Tan, J. M. Kasper, and J. R. White

Phys. Rev. E 110, 045208 (2024) - Published 22 October, 2024

Nonperturbative theory of the low-to-high confinement transition through stochastic simulations and information geometry: Correlation and causal analyses

Eun-Jin Kim and Abhiram Anand Thiruthummal

Phys. Rev. E 110, 045209 (2024) - Published 24 October, 2024

Computational Physics

Comparison of the microcanonical population annealing algorithm with the Wang-Landau algorithm

Vyacheslav Mozolenko, Marina Fadeeva, and Lev Shchur

Phys. Rev. E 110, 045301 (2024) - Published 7 October, 2024

Explicit time marching method with enhanced stability

Nishant Soni, Akshaysingh Shekawat, Santosh Ansumali, and S. V. Diwakar

Phys. Rev. E 110, 045302 (2024) - Published 7 October, 2024

Identification of plagioclase extinction-angle features from polarized images using deep neural network

Jun Shu, Xiaohai He, Guifen Su, Haibo He, Fengyun Yue, and Qizhi Teng

Phys. Rev. E 110, 045303 (2024) - Published 8 October, 2024

Finding discrete symmetry groups via machine learning

Pablo Calvo-Barlés, Sergio G. Rodrigo, Eduardo Sánchez-Burillo, and Luis Martín-Moreno

Phys. Rev. E 110, 045304 (2024) - Published 10 October, 2024

Subgrid-scale model for large eddy simulations of incompressible turbulent flows within the lattice Boltzmann framework

Heng Zhang, Haibao Hu, Fan Zhang, and Xiaopeng Chen

Phys. Rev. E 110, 045305 (2024) - Published 11 October, 2024

Evaluation of three-point correlation functions from structural images on CPU and GPU architectures: Accounting for anisotropy effects

Vasily Postnicov, Marina V. Karsanina, Aleksey Khlyupin, and Kirill M. Gerke

Phys. Rev. E 110, 045306 (2024) - Published 15 October, 2024

Highly efficient ferroelectric capacitor reservoir computing through the study of its nonlinear polarization dynamics

Leisheng Jin, Yiming Cao, Zhuo Liu, Tao Liu, and Lijie Li

Phys. Rev. E 110, 045307 (2024) - Published 17 October, 2024

Energy landscapes of combinatorial optimization in Ising machines

Dmitrii Dobrynin, Adrien Renaudineau, Mohammad Hizzani, Dmitri Strukov, Masoud Mohseni, and John Paul Strachan

Phys. Rev. E 110, 045308 (2024) - Published 18 October, 2024

Level-set lattice Boltzmann method for interface-resolved simulations of immiscible two-phase flow

Shaotong Fu, Zikang Hao, Weite Su, Huahai Zhang, and Limin Wang

Phys. Rev. E 110, 045309 (2024) - Published 22 October, 2024

Pipelined information flow in molecular mechanical circuits leads to increased error and irreversibility

Ian Seet, Thomas E. Ouldridge, and Jonathan P. K. Doye

Phys. Rev. E 110, 045310 (2024) - Published 24 October, 2024

Solving initial-terminal value problem of time evolutions by a deep least action method: Newtonian dynamics and wave equations

Zhipeng Chang, Jerry Zhijian Yang, and Xiaofei Zhao

Phys. Rev. E 110, 045311 (2024) - Published 28 October, 2024

Amoeba Monte Carlo algorithms for random trees with controlled branching activity: Efficient trial move generation and universal dynamics

Pieter H. W. van der Hoek, Angelo Rosa, and Ralf Everaers

Phys. Rev. E 110, 045312 (2024) - Published 28 October, 2024

Simulating ensembles of branched macromolecules with annealed branches and statistically-controlled branching weights has been a long-standing challenge. The authors present a new algorithm for simulating random trees, advancing the computational theory of randomly branched polymers.

Probing double-distribution-function models in discrete-velocity Boltzmann methods for highly compressible flows: Particles-on-demand realization

S. A. Hosseini, A. Bhadauria, and I. V. Karlin

Phys. Rev. E 110, 045313 (2024) - Published 28 October, 2024

ERRATA

Erratum: Rough neutron fields and nuclear reactor noise [Phys. Rev. E 110, 014119 (2024)]

Eric Dumonteil

Phys. Rev. E 110, 049901 (2024) - Published 16 October, 2024

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