HIGHLIGHTED ARTICLES

Direct evaluation of dynamical large-deviation rate functions using a variational ansatz

Daniel Jacobson and Stephen Whitelam

Phys. Rev. E 100, 052139 (2019) - Published 25 November, 2019

Large-deviation rate functions play a role in dynamical systems similar to that of the free energy in equilibrium. The authors develop a method related to umbrella sampling that allows dynamical rate functions to be calculated in a manner similar to the calculation of free energies.

Phase behavior of blocky charge lattice polymers: Crystals, liquids, sheets, filaments, and clusters

Nicholas A. S. Robichaud, Ivan Saika-Voivod, and Stefan Wallin

Phys. Rev. E 100, 052404 (2019) - Published 15 November, 2019

Certain proteins condense into a liquidlike state instead of folding into a stable configuration. Using a lattice model, the authors simulate a variety of polymers and find different condensed phases. The results indicate that the formation of the liquidlike state will depend sensitively on the amino sequence of the protein.

Uniform distortions and generalized elasticity of liquid crystals

Epifanio G. Virga

Phys. Rev. E 100, 052701 (2019) - Published 15 November, 2019

This paper presents a generalization of the elastic theory of anisotropic materials having nematic symmetry. The author shows that two families of heliconical distortions with opposite twists account for all uniform distortions of the nematic director that can fill three-dimensional space. An expression describing the twist-bend nematic phase is provided based on this generalized elastic theory.

Confinement effects on the dynamics of a rigid particle in a nanochannel

Alberto Gubbiotti, Mauro Chinappi, and Carlo Massimo Casciola

Phys. Rev. E 100, 053307 (2019) - Published 12 November, 2019

How does a single nanoparticle move in a confined geometry comparable to its size? This question is of central importance now that we are able to realize nanodevices. In this work the authors overcome the limitations of previous theoretical models by simulating the motion of a rigid body under confinement using a statistical framework that takes into account thermal fluctuations.

RAPID COMMUNICATIONS

Statistical Physics

Learning a local symmetry with neural networks

A. Decelle, V. Martin-Mayor, and B. Seoane

Phys. Rev. E 100, 050102(R) (2019) - Published 6 November, 2019

Surprising variants of Cauchy's formula for mean chord length

Prabodh Shukla and Diana Thongjaomayum

Phys. Rev. E 100, 050103(R) (2019) - Published 19 November, 2019

Networks and Complex Systems

Nonuniversal opinion dynamics driven by opposing external influences

Deepak Bhat and S. Redner

Phys. Rev. E 100, 050301(R) (2019) - Published 11 November, 2019

Biological Physics

Critical size of neural population for reliable information transmission

Lubomir Kostal and Ryota Kobayashi

Phys. Rev. E 100, 050401(R) (2019) - Published 4 November, 2019

Translational control of gene expression via interacting feedback loops

Liang Wang, M. Carmen Romano, and Fordyce A. Davidson

Phys. Rev. E 100, 050402(R) (2019) - Published 26 November, 2019

Colloids, Complex Fluids, and Active Matter

Charge regulation radically modifies electrostatics in membrane stacks

Arghya Majee, Markus Bier, Ralf Blossey, and Rudolf Podgornik

Phys. Rev. E 100, 050601(R) (2019) - Published 5 November, 2019

Crossover of the effective charge in ionic thermoresponsive hydrogel particles

A. Moncho-Jordá and M. Quesada-Pérez

Phys. Rev. E 100, 050602(R) (2019) - Published 6 November, 2019

Stochastic thermodynamics for self-propelled particles

Grzegorz Szamel

Phys. Rev. E 100, 050603(R) (2019) - Published 14 November, 2019

Solid Mechanics

Continuum theory of bending-to-stretching transition

O. U. Salman, G. Vitale, and L. Truskinovsky

Phys. Rev. E 100, 051001(R) (2019) - Published 6 November, 2019

Isolated frequencies at which nonlinear materials behave linearly

Matthew D. Fronk and Michael J. Leamy

Phys. Rev. E 100, 051002(R) (2019) - Published 8 November, 2019

Fluid Dynamics

Rotating magnetic nanorods detect minute fluctuations of magnetic field

Vaibhav Palkar, Pavel Aprelev, Arthur Salamatin, Artis Brasovs, Olga Kuksenok, and Konstantin G. Kornev

Phys. Rev. E 100, 051101(R) (2019) - Published 13 November, 2019

ARTICLES

Statistical Physics

Performance optimization of low-dissipation thermal machines revisited

Ramandeep S. Johal

Phys. Rev. E 100, 052101 (2019) - Published 1 November, 2019

Nonintegrability and thermalization of one-dimensional diatomic lattices

Weicheng Fu, Yong Zhang, and Hong Zhao

Phys. Rev. E 100, 052102 (2019) - Published 4 November, 2019

Drift-diffusion processes resulting from elimination of fast variables under inhomogeneous conditions

Paul E. Lammert

Phys. Rev. E 100, 052103 (2019) - Published 4 November, 2019

Percolation of aligned rigid rods on two-dimensional triangular lattices

P. Longone, P. M. Centres, and A. J. Ramirez-Pastor

Phys. Rev. E 100, 052104 (2019) - Published 4 November, 2019

Optimized sampling of mixed-state observables

Marec W. Heger, Christiane P. Koch, and Daniel M. Reich

Phys. Rev. E 100, 052105 (2019) - Published 6 November, 2019

Criticality of the O(2) model with cubic anisotropies from nonperturbative renormalization

Andrzej Chlebicki and Pawel Jakubczyk

Phys. Rev. E 100, 052106 (2019) - Published 7 November, 2019

DNA breathing dynamics under periodic forcing: Study of several distribution functions of relevant Brownian functionals

Ashutosh Dubey and Malay Bandyopadhyay

Phys. Rev. E 100, 052107 (2019) - Published 7 November, 2019

Critical properties of cluster size distribution in an asymmetric diffusion-aggregation model

Jean-Yves Fortin

Phys. Rev. E 100, 052108 (2019) - Published 7 November, 2019

Heat conduction in harmonic chains with Lévy-type disorder

I. F. Herrera-González and J. A. Méndez-Bermúdez

Phys. Rev. E 100, 052109 (2019) - Published 8 November, 2019

Particle pinning suppresses spinodal criticality in the shear-banding instability

Bhanu Prasad Bhowmik, Smarajit Karmakar, Itamar Procaccia, and Corrado Rainone

Phys. Rev. E 100, 052110 (2019) - Published 11 November, 2019

Kardar-Parisi-Zhang universality of the Nagel-Schreckenberg model

Jan de Gier, Andreas Schadschneider, Johannes Schmidt, and Gunter M. Schütz

Phys. Rev. E 100, 052111 (2019) - Published 12 November, 2019

Turbidity data obtained from image analysis in near critical hydrogen

Ana Oprisan, Gurunath Gandikota, Denis Chatain, Yves Garrabos, and Daniel Beysens

Phys. Rev. E 100, 052112 (2019) - Published 13 November, 2019

Flip motion of solitary wave in an Ising-type Vicsek model

Hidetsugu Sakaguchi and Kazuya Ishibashi

Phys. Rev. E 100, 052113 (2019) - Published 14 November, 2019

Random sequential adsorption on Euclidean, fractal, and random lattices

P. M. Pasinetti, L. S. Ramirez, P. M. Centres, A. J. Ramirez-Pastor, and G. A. Cwilich

Phys. Rev. E 100, 052114 (2019) - Published 14 November, 2019

Free energy of a general computation

Ämin Baumeler and Stefan Wolf

Phys. Rev. E 100, 052115 (2019) - Published 15 November, 2019

Apparent violations of the second law in two-level systems

Christoph Streißnig and Holger Kantz

Phys. Rev. E 100, 052116 (2019) - Published 15 November, 2019

Generalized diffusion of quantum Brownian motion

Pedro J. Colmenares

Phys. Rev. E 100, 052117 (2019) - Published 15 November, 2019

Zeros of partition functions in the NPT ensemble

Timur Aslyamov and Iskander Akhatov

Phys. Rev. E 100, 052118 (2019) - Published 18 November, 2019

Unusual changeover in the transition nature of local-interaction Potts models

Nir Schreiber, Reuven Cohen, Simi Haber, Gideon Amir, and Baruch Barzel

Phys. Rev. E 100, 052119 (2019) - Published 18 November, 2019

Interface growth driven by a single active particle

Prachi Bisht and Mustansir Barma

Phys. Rev. E 100, 052120 (2019) - Published 18 November, 2019

Single-file transport in periodic potentials: The Brownian asymmetric simple exclusion process

Dominik Lips, Artem Ryabov, and Philipp Maass

Phys. Rev. E 100, 052121 (2019) - Published 18 November, 2019

Truncated Lévy motion through path integrals and applications to nondiffusive suprathermal ion transport

F. Manke, M. Baquero-Ruiz, I. Furno, O. Chellaï, A. Fasoli, and P. Ricci

Phys. Rev. E 100, 052122 (2019) - Published 18 November, 2019

From power law to Anderson localization in nonlinear Schrödinger equation with nonlinear randomness

Alexander Iomin

Phys. Rev. E 100, 052123 (2019) - Published 19 November, 2019

Stochastic thermodynamics of a harmonically trapped colloid in linear mixed flow

Asawari Pagare and Binny J. Cherayil

Phys. Rev. E 100, 052124 (2019) - Published 19 November, 2019

Nonequilibrium chemical potentials of steady-state lattice gas models in contact: A large-deviation approach

Jules Guioth and Eric Bertin

Phys. Rev. E 100, 052125 (2019) - Published 20 November, 2019

Finite-time performance of a quantum heat engine with a squeezed thermal bath

Jianhui Wang, Jizhou He, and Yongli Ma

Phys. Rev. E 100, 052126 (2019) - Published 20 November, 2019

Three heats in a strongly coupled system and bath

Chulan Kwon, Jaegon Um, Joonhyun Yeo, and Hyunggyu Park

Phys. Rev. E 100, 052127 (2019) - Published 20 November, 2019

Induced correlations and rupture of molecular chaos by anisotropic dissipative Janus hard disks

Antonio Lasanta, Aurora Torrente, and Mariano López de Haro

Phys. Rev. E 100, 052128 (2019) - Published 21 November, 2019

Dynamics of quasiperiodically driven spin systems

Sayak Ray, Subhasis Sinha, and Diptiman Sen

Phys. Rev. E 100, 052129 (2019) - Published 21 November, 2019

Model of magnetic friction obeying the Dieterich-Ruina law in the steady state

Hisato Komatsu

Phys. Rev. E 100, 052130 (2019) - Published 21 November, 2019

Multidimensional elephant random walk with coupled memory

Vitor M. Marquioni

Phys. Rev. E 100, 052131 (2019) - Published 22 November, 2019

Structural behavior of fluids from the vapor and liquid region to the supercritical phase

James Losey and Richard J. Sadus

Phys. Rev. E 100, 052132 (2019) - Published 22 November, 2019

Hidden complexity in Life-like rules

Miguel Melgarejo, Marco Alzate, and Nelson Obregon

Phys. Rev. E 100, 052133 (2019) - Published 22 November, 2019

Particle transport at arbitrary timescales with Poisson-distributed collisions

M. Baquero-Ruiz, F. Manke, I. Furno, A. Fasoli, and P. Ricci

Phys. Rev. E 100, 052134 (2019) - Published 22 November, 2019

Ensemble inequivalence in the Blume-Emery-Griffiths model near a fourth-order critical point

V. V. Prasad, Alessandro Campa, David Mukamel, and Stefano Ruffo

Phys. Rev. E 100, 052135 (2019) - Published 22 November, 2019

Work statistics for sudden quenches in interacting quantum many-body systems

Eric G. Arrais, Diego A. Wisniacki, Augusto J. Roncaglia, and Fabricio Toscano

Phys. Rev. E 100, 052136 (2019) - Published 25 November, 2019

Thermodynamic uncertainty relations including measurement and feedback

Patrick P. Potts and Peter Samuelsson

Phys. Rev. E 100, 052137 (2019) - Published 25 November, 2019

Universal and nonuniversal neural dynamics on small world connectomes: A finite-size scaling analysis

Mahdi Zarepour, Juan I. Perotti, Orlando V. Billoni, Dante R. Chialvo, and Sergio A. Cannas

Phys. Rev. E 100, 052138 (2019) - Published 25 November, 2019

Direct evaluation of dynamical large-deviation rate functions using a variational ansatz

Daniel Jacobson and Stephen Whitelam

Phys. Rev. E 100, 052139 (2019) - Published 25 November, 2019

Large-deviation rate functions play a role in dynamical systems similar to that of the free energy in equilibrium. The authors develop a method related to umbrella sampling that allows dynamical rate functions to be calculated in a manner similar to the calculation of free energies.

Derivation of an exact, nonequilibrium framework for nucleation: Nucleation is a priori neither diffusive nor Markovian

Anja Kuhnhold, Hugues Meyer, Graziano Amati, Philipp Pelagejcev, and Tanja Schilling

Phys. Rev. E 100, 052140 (2019) - Published 25 November, 2019

Continuous stochastic processes with nonlocal memory

S. S. Melnyk, V. A. Yampol'skii, and O. V. Usatenko

Phys. Rev. E 100, 052141 (2019) - Published 26 November, 2019

Kinetic theory of one-dimensional homogeneous long-range interacting systems sourced by 1/N2 effects

Jean-Baptiste Fouvry, Ben Bar-Or, and Pierre-Henri Chavanis

Phys. Rev. E 100, 052142 (2019) - Published 26 November, 2019

Analytical measure of temperature for nonlinear dynamical systems

Yue Liu and Dahai He

Phys. Rev. E 100, 052143 (2019) - Published 26 November, 2019

Non-self-averaging in random trapping transport: The diffusion coefficient in the fluctuation regime

K. A. Pronin

Phys. Rev. E 100, 052144 (2019) - Published 27 November, 2019

Critical charge and density coupling in ionic spherical models

Jean-Noël Aqua and Michael E. Fisher

Phys. Rev. E 100, 052145 (2019) - Published 27 November, 2019

Locating fixed points in the phase plane

Yanhua Zhang, Yeyin Zhao, Lizhu Chen, Xue Pan, Mingmei Xu, Zhiming Li, Yu Zhou, and Yuanfang Wu

Phys. Rev. E 100, 052146 (2019) - Published 27 November, 2019

Run-and-tumble motion in one dimension with space-dependent speed

L. Angelani and R. Garra

Phys. Rev. E 100, 052147 (2019) - Published 27 November, 2019

Nonlocal random walk over Floquet states of a dissipative nonlinear oscillator

Yaxing Zhang and M. I. Dykman

Phys. Rev. E 100, 052148 (2019) - Published 27 November, 2019

Generalized Einstein relations and conditions for anomalous relaxation

Jing-Dong Bao

Phys. Rev. E 100, 052149 (2019) - Published 27 November, 2019

Range of geometrical frustration in lattice spin models

Pierre Ronceray and Bruno Le Floch

Phys. Rev. E 100, 052150 (2019) - Published 27 November, 2019

Nonlinear Dynamics and Chaos

State-dependent vulnerability of synchronization

Everton S. Medeiros, Rene O. Medrano-T, Iberê L. Caldas, Tamás Tél, and Ulrike Feudel

Phys. Rev. E 100, 052201 (2019) - Published 4 November, 2019

Asymptotic relationship between homoclinic points and periodic orbit stability exponents

Jizhou Li and Steven Tomsovic

Phys. Rev. E 100, 052202 (2019) - Published 4 November, 2019

Discrete-breather-assisted charge transport along DNA-like molecular wires

A. P. Chetverikov, W. Ebeling, V. D. Lakhno, and M. G. Velarde

Phys. Rev. E 100, 052203 (2019) - Published 5 November, 2019

Rare events in mixed-mode oscillations from weakly coupled lasers

Eusebius J. Doedel and Carlos L. Pando L.

Phys. Rev. E 100, 052204 (2019) - Published 11 November, 2019

Structure of resonance eigenfunctions for chaotic systems with partial escape

Konstantin Clauß, Eduardo G. Altmann, Arnd Bäcker, and Roland Ketzmerick

Phys. Rev. E 100, 052205 (2019) - Published 12 November, 2019

Wannier basis method for the Kolmogorov-Arnold-Moser effect in quantum mechanics

Chao Yin (尹超), Yu Chen (陈宇), and Biao Wu (吴飙)

Phys. Rev. E 100, 052206 (2019) - Published 14 November, 2019

Fractal structures in the parameter space of nontwist area-preserving maps

A. C. Mathias, M. Mugnaine, M. S. Santos, J. D. Szezech, Jr., I. L. Caldas, and R. L. Viana

Phys. Rev. E 100, 052207 (2019) - Published 18 November, 2019

Distribution of growth directions in meadows of clonal plants

D. Ruiz-Reynés and D. Gomila

Phys. Rev. E 100, 052208 (2019) - Published 18 November, 2019

Solitary wave formation under the interplay between spatial inhomogeneity and nonlocality

Konstantinos Dragonas and Yannis Kominis

Phys. Rev. E 100, 052209 (2019) - Published 20 November, 2019

Nucleation of spatiotemporal structures from defect turbulence in the two-dimensional complex Ginzburg-Landau equation

Weigang Liu and Uwe C. Täuber

Phys. Rev. E 100, 052210 (2019) - Published 20 November, 2019

Noise-induced macroscopic oscillations in a network of synaptically coupled quadratic integrate-and-fire neurons

Irmantas Ratas and Kestutis Pyragas

Phys. Rev. E 100, 052211 (2019) - Published 21 November, 2019

Revival and death of oscillation under mean-field coupling: Interplay of intrinsic and extrinsic filtering

Krishna Kumar, Debabrata Biswas, Tanmoy Banerjee, Wei Zou, J. Kurths, and D. V. Senthilkumar

Phys. Rev. E 100, 052212 (2019) - Published 22 November, 2019

Dynamics of A+B  C reaction fronts under radial advection in three dimensions

Alessandro Comolli, A. De Wit, and Fabian Brau

Phys. Rev. E 100, 052213 (2019) - Published 25 November, 2019

Simulation of geochemical banding: Theoretical modeling and fractal structure in acidization-diffusion-precipitation dynamics

Mazen Al-Ghoul and Rabih Sultan

Phys. Rev. E 100, 052214 (2019) - Published 25 November, 2019

Hyperchaos synchronization using univariate impulse control

Kun Tian, Chao Bai, Hai-Peng Ren, and Celso Grebogi

Phys. Rev. E 100, 052215 (2019) - Published 25 November, 2019

High-order rogue waves of a long-wave–short-wave model of Newell type

Junchao Chen, Liangyuan Chen, Bao-Feng Feng, and Ken-ichi Maruno

Phys. Rev. E 100, 052216 (2019) - Published 25 November, 2019

Pattern formation in reaction-diffusion systems in the presence of non-Markovian diffusion

Reza Torabi and Jörn Davidsen

Phys. Rev. E 100, 052217 (2019) - Published 26 November, 2019

Mechanism of dissipative soliton stabilization by nonlinear gradient terms

Orazio Descalzi, Jaime Cisternas, and Helmut R. Brand

Phys. Rev. E 100, 052218 (2019) - Published 26 November, 2019

Rogue waves on the double-periodic background in the focusing nonlinear Schrödinger equation

Jinbing Chen, Dmitry E. Pelinovsky, and Robert E. White

Phys. Rev. E 100, 052219 (2019) - Published 27 November, 2019

Networks and Complex Systems

Mechanism for explosive synchronization of neural networks

B. R. R. Boaretto, R. C. Budzinski, T. L. Prado, and S. R. Lopes

Phys. Rev. E 100, 052301 (2019) - Published 4 November, 2019

Dynamical correlations and pairwise theory for the symbiotic contact process on networks

Marcelo M. de Oliveira, Sidiney G. Alves, and Silvio C. Ferreira

Phys. Rev. E 100, 052302 (2019) - Published 4 November, 2019

Early-warning signals using dynamical network markers selected by covariance

Tadayoshi Matsumori, Hiroyuki Sakai, and Kazuyuki Aihara

Phys. Rev. E 100, 052303 (2019) - Published 12 November, 2019

Cooperator-driven and defector-driven punishments: How do they influence cooperation?

Pengbi Cui (崔鹏碧), Zhi-Xi Wu, Tao Zhou, and Xiaojie Chen

Phys. Rev. E 100, 052304 (2019) - Published 13 November, 2019

High-order couplings in geometric complex networks of neurons

A. Tlaie, I. Leyva, and I. Sendiña-Nadal

Phys. Rev. E 100, 052305 (2019) - Published 14 November, 2019

Asymmetry in interdependence makes a multilayer system more robust against cascading failures

Run-Ran Liu, Chun-Xiao Jia, and Ying-Cheng Lai

Phys. Rev. E 100, 052306 (2019) - Published 18 November, 2019

Replicator population dynamics of group interactions: Broken symmetry, thresholds for metastability, and macroscopic behavior

Emmanuel Artiges, Carlos Gracia-Lázaro, Luis Mario Floría, and Yamir Moreno

Phys. Rev. E 100, 052307 (2019) - Published 20 November, 2019

Exploring the solution landscape enables more reliable network community detection

Joaquín Calatayud, Rubén Bernardo-Madrid, Magnus Neuman, Alexis Rojas, and Martin Rosvall

Phys. Rev. E 100, 052308 (2019) - Published 21 November, 2019

Giant component in a configuration-model power-law graph with a variable number of links

Heung Kyung Kim, Mi Jin Lee, Matthieu Barbier, Sung-Gook Choi, Min Seok Kim, Hyung-Ha Yoo, and Deok-Sun Lee

Phys. Rev. E 100, 052309 (2019) - Published 22 November, 2019

Characterizing nonstationary coherent states in globally coupled conformist and contrarian oscillators

Tian Qiu, S. Boccaletti, Zonghua Liu, and Shuguang Guan

Phys. Rev. E 100, 052310 (2019) - Published 25 November, 2019

Efficient spread-size approximation of opinion spreading in general social networks

Byeongjin Choe, Yishi Lin, Sungsu Lim, John C. S. Lui, and Kyomin Jung

Phys. Rev. E 100, 052311 (2019) - Published 25 November, 2019

Machine learning dynamical phase transitions in complex networks

Qi Ni, Ming Tang, Ying Liu, and Ying-Cheng Lai

Phys. Rev. E 100, 052312 (2019) - Published 26 November, 2019

Latent geometry and dynamics of proximity networks

Fragkiskos Papadopoulos and Marco Antonio Rodríguez Flores

Phys. Rev. E 100, 052313 (2019) - Published 26 November, 2019

Network desynchronization by non-Gaussian fluctuations

Jason Hindes, Philippe Jacquod, and Ira B. Schwartz

Phys. Rev. E 100, 052314 (2019) - Published 27 November, 2019

Eigenvalue repulsion and eigenvector localization in sparse non-Hermitian random matrices

Grace H. Zhang and David R. Nelson

Phys. Rev. E 100, 052315 (2019) - Published 27 November, 2019

Biological Physics

Spatial propagation of electrical signals in circular biofilms: A combined experimental and agent-based fire-diffuse-fire study

J. A. Blee, I. S. Roberts, and T. A. Waigh

Phys. Rev. E 100, 052401 (2019) - Published 4 November, 2019

Investigation of chemical noise in multisite phosphorylation chain using linear noise approximation

Soutrick Das and Debashis Barik

Phys. Rev. E 100, 052402 (2019) - Published 11 November, 2019

Dynamics of particle uptake at cell membranes

Felix Frey, Falko Ziebert, and Ulrich S. Schwarz

Phys. Rev. E 100, 052403 (2019) - Published 14 November, 2019

Phase behavior of blocky charge lattice polymers: Crystals, liquids, sheets, filaments, and clusters

Nicholas A. S. Robichaud, Ivan Saika-Voivod, and Stefan Wallin

Phys. Rev. E 100, 052404 (2019) - Published 15 November, 2019

Certain proteins condense into a liquidlike state instead of folding into a stable configuration. Using a lattice model, the authors simulate a variety of polymers and find different condensed phases. The results indicate that the formation of the liquidlike state will depend sensitively on the amino sequence of the protein.

Loop formation and translational diffusion of intrinsically disordered proteins

Steffen Mühle, Man Zhou, Arindam Ghosh, and Jörg Enderlein

Phys. Rev. E 100, 052405 (2019) - Published 18 November, 2019

Single-cell stochastic gene expression kinetics with coupled positive-plus-negative feedback

Chen Jia, Le Yi Wang, George G. Yin, and Michael Q. Zhang

Phys. Rev. E 100, 052406 (2019) - Published 18 November, 2019

Nonautonomous dynamics of acute cell injury

Donald J. DeGracia, Doaa Taha, Fika Tri Anggraini, and Zhi-Feng Huang

Phys. Rev. E 100, 052407 (2019) - Published 19 November, 2019

Mechanical conditions for stable symmetric cell constriction

Elena Beltrán-Heredia, Francisco Monroy, and Francisco J. Cao-García

Phys. Rev. E 100, 052408 (2019) - Published 21 November, 2019

Role of substrate-product frustration on enzyme functional dynamics

Jianyang Kong, Jiachen Li, Jiajun Lu, Wenfei Li, and Wei Wang

Phys. Rev. E 100, 052409 (2019) - Published 25 November, 2019

Magnetic polymer models for epigenetics-driven chromosome folding

Davide Colì, Enzo Orlandini, Davide Michieletto, and Davide Marenduzzo

Phys. Rev. E 100, 052410 (2019) - Published 26 November, 2019

Weak selection can filter environmental noise in the evolution of animal behavior

Cong Li, Xiu-Deng Zheng, Tian-Jiao Feng, Ming-Yang Wang, Sabin Lessard, and Yi Tao

Phys. Rev. E 100, 052411 (2019) - Published 26 November, 2019

Packing of semiflexible polymers into viral capsid in crowded environments

N. Al-Naamani and I. Ali

Phys. Rev. E 100, 052412 (2019) - Published 26 November, 2019

Polymers

Dumbbell kinetic theory for polymers in a combination of flow and external electric field

Angelo C. Setaro and Patrick T. Underhill

Phys. Rev. E 100, 052501 (2019) - Published 4 November, 2019

Phase behavior of disk-coil block copolymers under cylindrical confinement: Curvature-induced structural frustrations

Min Young Ha, Ji Ho Ryu, Eugene N. Cho, Junwon Choi, YongJoo Kim, and Won Bo Lee

Phys. Rev. E 100, 052502 (2019) - Published 15 November, 2019

Colloids, Complex Fluids, and Active Matter

Rigorously solvable model for the electrical conductivity of dispersions of hard-core–penetrable-shell particles and its applications

M. Ya. Sushko and A. K. Semenov

Phys. Rev. E 100, 052601 (2019) - Published 1 November, 2019

Microphase separation in a two-dimensional colloidal system with competing attractive critical Casimir and repulsive magnetic dipole interactions

Kevin Marolt, Michael Zimmermann, and Roland Roth

Phys. Rev. E 100, 052602 (2019) - Published 4 November, 2019

Design strategies for engineering soluto-inertial suspension interactions

Anirudha Banerjee, Douglas R. Vogus, and Todd M. Squires

Phys. Rev. E 100, 052603 (2019) - Published 6 November, 2019

Phase coexistence of active Brownian particles

Sophie Hermann, Philip Krinninger, Daniel de las Heras, and Matthias Schmidt

Phys. Rev. E 100, 052604 (2019) - Published 8 November, 2019

From normal diffusion to superdiffusion: Photothermal heating of plasmonic core-shell microgels

Nico Carl, Julian Sindram, Markus Gallei, Stefan U. Egelhaaf, and Matthias Karg

Phys. Rev. E 100, 052605 (2019) - Published 12 November, 2019

Coupling of long-wavelength density fluctuations to orientations in cellulose nanocrystal suspensions under external fields

Kyongok Kang, Pascal Bertsch, and Peter Fischer

Phys. Rev. E 100, 052606 (2019) - Published 14 November, 2019

Two-step relaxation and the breakdown of the Stokes-Einstein relation in glass-forming liquids

Baicheng Mei, Yuyuan Lu, Lijia An, and Zhen-Gang Wang

Phys. Rev. E 100, 052607 (2019) - Published 15 November, 2019

Tuning and jamming reduced to their minima

Miguel Ruiz-García, Andrea J. Liu, and Eleni Katifori

Phys. Rev. E 100, 052608 (2019) - Published 19 November, 2019

Seeding approach to bubble nucleation in superheated Lennard-Jones fluids

P. Rosales-Pelaez, M. I. Garcia-Cid, C. Valeriani, C. Vega, and E. Sanz

Phys. Rev. E 100, 052609 (2019) - Published 20 November, 2019

Ramifications of disorder on active particles in one dimension

Ydan Ben Dor, Eric Woillez, Yariv Kafri, Mehran Kardar, and Alexandre P. Solon

Phys. Rev. E 100, 052610 (2019) - Published 21 November, 2019

Liquid Crystals

Uniform distortions and generalized elasticity of liquid crystals

Epifanio G. Virga

Phys. Rev. E 100, 052701 (2019) - Published 15 November, 2019

This paper presents a generalization of the elastic theory of anisotropic materials having nematic symmetry. The author shows that two families of heliconical distortions with opposite twists account for all uniform distortions of the nematic director that can fill three-dimensional space. An expression describing the twist-bend nematic phase is provided based on this generalized elastic theory.

Chiral nematic liquid crystals in torus-shaped and cylindrical cavities

Charlie R. Wand and Martin A. Bates

Phys. Rev. E 100, 052702 (2019) - Published 25 November, 2019

Helicoids in chiral liquid crystals under external fields

G. De Matteis, L. Martina, C. Naya, and V. Turco

Phys. Rev. E 100, 052703 (2019) - Published 27 November, 2019

Films and Interfaces

Microscopic determination of correlations in the fluid interfacial region in the presence of liquid-gas asymmetry

A. O. Parry and C. Rascón

Phys. Rev. E 100, 052801 (2019) - Published 12 November, 2019

Slope selection in unstable multilayer growth in 1+1 dimensions: Step flow models with downward funneling

Ian Johnson, Christian Ratsch, Frederic Gibou, and Dionisios Margetis

Phys. Rev. E 100, 052802 (2019) - Published 18 November, 2019

Enhanced fluctuation for pinned surface nanobubbles

Zhenjiang Guo and Xianren Zhang

Phys. Rev. E 100, 052803 (2019) - Published 18 November, 2019

Hierarchical crack patterns of metal films sputter deposited on soft elastic substrates

Senjiang Yu, Long Ma, Linghui He, and Yong Ni

Phys. Rev. E 100, 052804 (2019) - Published 19 November, 2019

Two-step unconventional protocol for epitaxial growth in one dimension with hindered reactions

Julián A. Sánchez, Diego Luis González, and T. L. Einstein

Phys. Rev. E 100, 052805 (2019) - Published 20 November, 2019

Granular Materials

Inhomogeneous cooling state of a strongly confined granular gas at low density

J. Javier Brey, M. I. García de Soria, and P. Maynar

Phys. Rev. E 100, 052901 (2019) - Published 6 November, 2019

Granular segregation induced by a moving subsurface blade

Vidushi Dwivedi, Julio M. Ottino, Richard M. Lueptow, and Paul B. Umbanhowar

Phys. Rev. E 100, 052902 (2019) - Published 8 November, 2019

Random sequential adsorption of particles with tetrahedral symmetry

Piotr Kubala, Michał Cieśla, and Robert M. Ziff

Phys. Rev. E 100, 052903 (2019) - Published 18 November, 2019

Solid Mechanics

System-size-dependent avalanche statistics in the limit of high disorder

Viktória Kádár and Ferenc Kun

Phys. Rev. E 100, 053001 (2019) - Published 5 November, 2019

Tantalum strength at extreme strain rates from impact-driven Richtmyer-Meshkov instabilities

Michael B. Prime, William T. Buttler, Saryu J. Fensin, David R. Jones, Justin L. Brown, Robert S. King, Ruben Manzanares, Daniel T. Martinez, John I. Martinez, Jeremy R. Payton, and Derek W. Schmidt

Phys. Rev. E 100, 053002 (2019) - Published 6 November, 2019

Birth and decay of tensional wrinkles in hyperelastic sheets

Andreea Panaitescu, Meng Xin, Benny Davidovitch, Julien Chopin, and Arshad Kudrolli

Phys. Rev. E 100, 053003 (2019) - Published 18 November, 2019

Intermediate asymptotics on dynamical impact of solid sphere on militextured surface

Hirokazu Maruoka

Phys. Rev. E 100, 053004 (2019) - Published 20 November, 2019

Isomorph invariance of dynamics of sheared glassy systems

Yonglun Jiang, Eric R. Weeks, and Nicholas P. Bailey

Phys. Rev. E 100, 053005 (2019) - Published 25 November, 2019

Fluid Dynamics

Energy and enstrophy spectra and fluxes for the inertial-dissipation range of two-dimensional turbulence

Akanksha Gupta, Rohith Jayaram, Anando G. Chaterjee, Shubhadeep Sadhukhan, Ravi Samtaney, and Mahendra K. Verma

Phys. Rev. E 100, 053101 (2019) - Published 4 November, 2019

Nanocatalytic chemohydrodynamic instability: Deposition effects

B. Dastvareh, J. Azaiez, and P. A. Tsai

Phys. Rev. E 100, 053102 (2019) - Published 8 November, 2019

Lagrangian coherent sets in turbulent Rayleigh-Bénard convection

Christiane Schneide, Martin Stahn, Ambrish Pandey, Oliver Junge, Péter Koltai, Kathrin Padberg-Gehle, and Jörg Schumacher

Phys. Rev. E 100, 053103 (2019) - Published 11 November, 2019

Stability of a jet moving in a rectangular microchannel

M. G. Cabezas, M. A. Herrada, and José M. Montanero

Phys. Rev. E 100, 053104 (2019) - Published 18 November, 2019

Determination of energy flux rate in homogeneous ferrohydrodynamic turbulence using two-point statistics

Sukhdev Mouraya and Supratik Banerjee

Phys. Rev. E 100, 053105 (2019) - Published 18 November, 2019

Harmonic and subharmonic waves on the surface of a vibrated liquid drop

Ivan S. Maksymov and Andrey Pototsky

Phys. Rev. E 100, 053106 (2019) - Published 20 November, 2019

Dynamics of two-dimensional flow around a circular cylinder with flexible filaments attached

Jian Deng, Xuerui Mao, and Fangfang Xie

Phys. Rev. E 100, 053107 (2019) - Published 25 November, 2019

Two jets during the impact of viscous droplets onto a less-viscous liquid pool

Quan Ding, Tianyou Wang, and Zhizhao Che

Phys. Rev. E 100, 053108 (2019) - Published 25 November, 2019

Interfacial dynamics and pinch-off singularities for axially symmetric Darcy flow

Liam C. Morrow, Michael C. Dallaston, and Scott W. McCue

Phys. Rev. E 100, 053109 (2019) - Published 25 November, 2019

Generation of bursting magnetic fields by nonperiodic torsional flows

Juan Sánchez Umbría and Marta Net

Phys. Rev. E 100, 053110 (2019) - Published 26 November, 2019

Evolution of Gaussian wave packets in capillary jets

F. J. García, H. González, F. J. Gómez-Aguilar, A. A. Castrejón-Pita, and J. R. Castrejón-Pita

Phys. Rev. E 100, 053111 (2019) - Published 26 November, 2019

Plasma Physics

Negative entropy-production rate in Rayleigh-Bénard convection in two-dimensional Yukawa liquids

Pawandeep Kaur and Rajaraman Ganesh

Phys. Rev. E 100, 053201 (2019) - Published 7 November, 2019

Modeling and diagnostics for plasma discharge capillaries

A. Curcio, F. Bisesto, G. Costa, A. Biagioni, M. P. Anania, R. Pompili, M. Ferrario, and M. Petrarca

Phys. Rev. E 100, 053202 (2019) - Published 18 November, 2019

Spatiotemporal visualization of the terahertz emission during high-power laser-matter interaction

A. Gopal, A. Woldegeorgis, S. Herzer, and M. Almassarani

Phys. Rev. E 100, 053203 (2019) - Published 25 November, 2019

Modeling terahertz emission from the target rear side during intense laser-solid interactions

A. Woldegeorgis, S. Herzer, M. Almassarani, S. Marathapalli, and A. Gopal

Phys. Rev. E 100, 053204 (2019) - Published 25 November, 2019

Ultrafast wave-particle energy transfer in the collapse of standing whistler waves

Takayoshi Sano, Masayasu Hata, Daiki Kawahito, Kunioki Mima, and Yasuhiko Sentoku

Phys. Rev. E 100, 053205 (2019) - Published 26 November, 2019

Magnetosonic shock waves in magnetized quantum plasma with the evolution of spin-up and spin-down electrons

Zakia Rahim, Muhammad Adnan, and Anisa Qamar

Phys. Rev. E 100, 053206 (2019) - Published 27 November, 2019

High-quality high-order harmonic generation through preplasma truncation

B. Y. Li, F. Liu, M. Chen, Z. Y. Chen, X. H. Yuan, S. M. Weng, T. Jin, S. G. Rykovanov, J. W. Wang, Z. M. Sheng, and J. Zhang

Phys. Rev. E 100, 053207 (2019) - Published 27 November, 2019

Computational Physics

Time propagation of the coupled Maxwell and Kohn-Sham equations using the Riemann-Silberstein formalism

Cody Covington, Daniel Kidd, Haley Buckner, Heiko Appel, and Kálmán Varga

Phys. Rev. E 100, 053301 (2019) - Published 4 November, 2019

Fast logarithmic Fourier-Laplace transform of nonintegrable functions

Johannes Lang and Bernhard Frank

Phys. Rev. E 100, 053302 (2019) - Published 4 November, 2019

Fifth-order finite-difference scheme for Fokker-Planck equations with drift-admitting jumps

Yaming Chen and Xiaogang Deng

Phys. Rev. E 100, 053303 (2019) - Published 4 November, 2019

Thermodynamic consistency of a pseudopotential lattice Boltzmann fluid with interface curvature

Jingwei Huang, Xiaolong Yin, and John Killough

Phys. Rev. E 100, 053304 (2019) - Published 11 November, 2019

Unfolding a quantum master equation into a system of real-valued equations: Computationally effective expansion over the basis of SU(N) generators

A. Liniov, I. Meyerov, E. Kozinov, V. Volokitin, I. Yusipov, M. Ivanchenko, and S. Denisov

Phys. Rev. E 100, 053305 (2019) - Published 11 November, 2019

Nonintrusive reduced order modeling framework for quasigeostrophic turbulence

Sk. M. Rahman, S. Pawar, O. San, A. Rasheed, and T. Iliescu

Phys. Rev. E 100, 053306 (2019) - Published 12 November, 2019

Confinement effects on the dynamics of a rigid particle in a nanochannel

Alberto Gubbiotti, Mauro Chinappi, and Carlo Massimo Casciola

Phys. Rev. E 100, 053307 (2019) - Published 12 November, 2019

How does a single nanoparticle move in a confined geometry comparable to its size? This question is of central importance now that we are able to realize nanodevices. In this work the authors overcome the limitations of previous theoretical models by simulating the motion of a rigid body under confinement using a statistical framework that takes into account thermal fluctuations.

Spectral Galerkin solver for intense beam Vlasov equilibria in nonlinear constant focusing channels

Chad E. Mitchell, Robert D. Ryne, and Kilean Hwang

Phys. Rev. E 100, 053308 (2019) - Published 13 November, 2019

Noise can speed Markov chain Monte Carlo estimation and quantum annealing

Brandon Franzke and Bart Kosko

Phys. Rev. E 100, 053309 (2019) - Published 15 November, 2019

Optimizing performance of metamaterial wormhole superabsorbers

Hugo R. L. Ferreira, Nuno G. B. Brás, and Stanislav I. Maslovski

Phys. Rev. E 100, 053310 (2019) - Published 18 November, 2019

Taming a nonconvex landscape with dynamical long-range order: Memcomputing Ising benchmarks

Forrest Sheldon, Fabio L. Traversa, and Massimiliano Di Ventra

Phys. Rev. E 100, 053311 (2019) - Published 20 November, 2019

Calculation of tensorial flow properties on pore level: Exploring the influence of boundary conditions on the permeability of three-dimensional stochastic reconstructions

Kirill M. Gerke, Marina V. Karsanina, and Regina Katsman

Phys. Rev. E 100, 053312 (2019) - Published 20 November, 2019

Implementation of contact angles in pseudopotential lattice Boltzmann simulations with curved boundaries

Q. Li, Y. Yu, and Kai H. Luo

Phys. Rev. E 100, 053313 (2019) - Published 21 November, 2019

Improved algorithm for estimating pore size distribution from pore space images of porous media

Shuaibing Song, Qile Ding, and Jingna Wei

Phys. Rev. E 100, 053314 (2019) - Published 21 November, 2019

High-order acoustic vortex field generation based on a metasurface

Zhongyi Guo, Hongjun Liu, Hong Zhou, Keya Zhou, Shaomeng Wang, Fei Shen, Yubin Gong, Jun Gao, Shutian Liu, and Kai Guo

Phys. Rev. E 100, 053315 (2019) - Published 21 November, 2019

Nested multiresolution hierarchical simulated annealing algorithm for porous media reconstruction

Laurent Lemmens, Bart Rogiers, Diederik Jacques, Marijke Huysmans, Rudy Swennen, Janos L. Urai, Guillaume Desbois, and Eric Laloy

Phys. Rev. E 100, 053316 (2019) - Published 25 November, 2019

Origin of spurious oscillations in lattice Boltzmann simulations of oscillatory noncontinuum gas flows

Yong Shi, Daniel R. Ladiges, and John E. Sader

Phys. Rev. E 100, 053317 (2019) - Published 25 November, 2019

COMMENTS

Comment on “Acoustic deformation for the extraction of mechanical properties of lipid vesicle populations”

Philip L. Marston

Phys. Rev. E 100, 057001 (2019) - Published 18 November, 2019

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