Export citation

Export citation

Choose format for download:

Download Citation
  • Access by Xinjiang University

Colloquium: Geometry and optimal packing of twisted columns and filaments

Gregory M. Grason

Gregory M. Grason

  • Department of Polymer Science and Engineering, University of Massachusetts, Amherst, Massachusetts 01003, USA

Rev. Mod. Phys. 87, 401 – Published 14 May, 2015

DOI: https://doi.org/10.1103/RevModPhys.87.401

Abstract

This Colloquium presents recent progress in understanding constraints and consequences of close-packing geometry of filamentous or columnar materials possessing nontrivial textures, focusing, in particular, on the common motifs of twisted and toroidal structures. The mathematical framework is presented that relates spacing between linelike, filamentous elements to their backbone orientations, highlighting the explicit connection between the interfilament metric properties and the geometry of non-Euclidean surfaces. The consequences of the hidden connection between packing in twisted filament bundles and packing on positively curved surfaces, like the Thomson problem, are demonstrated for the defect-riddled ground states of physical models of twisted filament bundles. The connection between the “ideal” geometry of fibrations of curved three-dimensional space, including the Hopf fibration, and the non-Euclidean constraints of filament packing in twisted and toroidal bundles is presented, with a focus on the broader dependence of metric geometry on the simultaneous twisting and folding of multifilament bundles.

Article Text

References (92)

  1. Alberts, B., A. Johnson, J. Lewis, M. Raff, K. Roberts, and P. Walter, 2002, Molecular Biology of the Cell (Garland Science, New York), 4th ed.
  2. Altschuler, E. L., T. J. Williams, E. R. Ratner, R. Tipton, R. Stong, F. Dowla, and F. Wooten, 1997, Phys. Rev. Lett. 78, 2681.
  3. Azadi, A., and G. M. Grason, 2012, Phys. Rev. E 85, 031604.
  4. Azadi, A., and G. M. Grason, 2014, Phys. Rev. Lett. 112, 225502.
  5. Bausch, A. R., M. J. Bowick, A. Cacciuto, A. D. Dinsmore, M. F. Hsu, D. R. Nelson, M. G. Nikolaides, A. Travesset, and D. A. Weitz, 2003, Science 299, 1716.
  6. Berger, M., 2003, A Panoramic View of Riemannian Geometry (Springer-Verlag, Berlin).
  7. Bernal, J. D., and J. Mason, 1960, Nature (London) 188, 910.
  8. Bouligand, Y., 2008, C.R. Chim. 11, 281.
  9. Bouligand, Y., J.-P. Denefle, J.-P. Lechaire, and M. Maillard, 1985, Biol. Cell 54, 143.
  10. Bowick, M. J., and L. Giomi, 2009, Adv. Phys. 58, 449.
  11. Bowick, M. J., D. R. Nelson, and A. Travesset, 2000, Phys. Rev. B 62, 8738.
  12. Bruss, I. R., and G. M. Grason, 2012, Proc. Natl. Acad. Sci. U.S.A. 109, 10781.
  13. Bruss, I. R., and G. M. Grason, 2013, Soft Matter 9, 8327.
  14. Bugayevsky, L. M., and J. P. Snyder, 1995, Map Projections: A Reference Manual (Taylor and Francis, Philadelphia).
  15. Caspar, D. L. D., and A. Klug, 1962, Cold Spring Harbor Symp. Quant. Biol. 27, 1.
  16. Chaikin, P. M., and T. C. Lubensky, 1995, Principles of Condensed Matter Physics (Cambridge University Press, Cambridge, England).
  17. Charvolin, J., and J.-F. Sadoc, 2008, Eur. Phys. J. E 25, 335.
  18. Charvolin, J., and J.-F. Sadoc, 2011, Biophys. Rev. Lett. 06, 13.
  19. Che, S., Z. Liu, T. Ohsuna, K. Sakamoto, O. Terasaki, and T. Tatsumi, 2004, Nature (London) 429, 281.
  20. Cooper, A., 1969, Biochem. J. 112, 515 [http://www.biochemj.org/bj/112/bj1120515.htm].
  21. Costello, G. A., 1997, Theory of Wire Rope (Springer-Verlag, New York), 2nd ed.
  22. de Gennes, P. G., and J. Prost, 1993, The Physics of Liquid Crystals (Claredon Press, Oxford), 2nd ed.
  23. de Gennes, P.-G., 1972, Solid State Commun. 10, 753.
  24. do Carmo, M. P., 1976, Differential Geoemetry of Curves and Surfaces (Prentice-Hall, Englewood Cliffs), Chap. 4.
  25. Douglas, J. F., 2009, Langmuir 25, 8386.
  26. Foster, J. A., M.-O. Piepenbrock, G. O. Lloyd, N. Clarke, J. A. K. Howard, and J. W. Steed, 2010, Nat. Chem. 2, 1037.
  27. Galileo, G., 1914, Dialogues Concerning Two New Sciences (MacMillan, New York).
  28. Goodby, J. W., 1991, J. Mater. Chem. 1, 307.
  29. Goodby, J. W., 2012, Proc. R. Soc. A 468, 1521.
  30. Grason, G. M., 2009, Phys. Rev. E 79, 041919.
  31. Grason, G. M., 2010, Phys. Rev. Lett. 105, 045502.
  32. Grason, G. M., 2012, Phys. Rev. E 85, 031603.
  33. Grason, G. M., and R. F. Bruinsma, 2007, Phys. Rev. Lett. 99, 098101.
  34. Grason, G. M., and B. Davidovitch, 2013, Proc. Natl. Acad. Sci. U.S.A. 110, 12893.
  35. Hales, T. C., 2000, Not. Am. Math. Soc. 47, 440 [http://www.ams.org/notices/200004/fea-hales.pdf].
  36. Hamley, I. W., 2010, Soft Matter 6, 1863.
  37. Harris, A. B., R. D. Kamien, and T. C. Lubensky, 1999, Rev. Mod. Phys. 71, 1745.
  38. Hearle, J. W. S., P. Grosberg, and S. Backer, 1969, Structural Mechanics of Fibers, Yarns, and Fabricss, Vol. 1 (Wiley-Interscience, New York).
  39. Heussinger, C., and G. M. Grason, 2011, J. Chem. Phys. 135, 035104.
  40. Hud, N. V., and K. H. Downing, 2001, Proc. Natl. Acad. Sci. U.S.A. 98, 14925.
  41. Hud, N. V., K. H. Downing, and R. Balhorn, 1995, Proc. Natl. Acad. Sci. U.S.A. 92, 3581.
  42. Hulmes, D. J., T. J. Wess, D. J. Prockop, and P. Fratzl, 1995, Biophys. J. 68, 1661.
  43. Irvine, W. T., V. Vitelli, and P. M. Chaikin, 2010, Nature (London) 468, 947.
  44. Jeong, J., Z. S. Davidson, P. J. Collings, T. C. Lubensky, and A. J. Yodh, 2014, Proc. Natl. Acad. Sci. U.S.A. 111, 1742.
  45. Kamien, R. D., 2002, Rev. Mod. Phys. 74, 953.
  46. Kamien, R. D., and D. R. Nelson, 1995, Phys. Rev. Lett. 74, 2499.
  47. Kamien, R. D., and D. R. Nelson, 1996, Phys. Rev. E 53, 650.
  48. Kléman, M., 1980, J. Phys. France 41, 737.
  49. Kléman, M., 1985, J. Phys. Lett. 46, 723.
  50. Kléman, M., 1989, Adv. Phys. 38, 605.
  51. Knobler, C. M., and W. Gelbart, 2009, Annu. Rev. Phys. Chem. 60, 367.
  52. Kouwer, P. H. J., et al., 2013, Nature (London) 493, 651.
  53. Kroto, H., 1997, Rev. Mod. Phys. 69, 703.
  54. Lee, C. C., C. Grenier, E. W. Meijer, and A. P. H. J. Schenning, 2009, Chem. Soc. Rev. 38, 671.
  55. Leforestier, A., and F. Livolant, 2009, Proc. Natl. Acad. Sci. U.S.A. 106, 9157.
  56. Leforestier, A., and F. Livolant, 2010, J. Mol. Biol. 396, 384.
  57. Livolant, F., and A. Leforestier, 1996, Prog. Polym. Sci. 21, 1115.
  58. Livolant, F., A. M. Levelut, J. Doucet, and J. P. Benoit, 1989, Nature (London) 339, 724.
  59. Makowski, L., and B. Magdoff-Fairchild, 1986, Science 234, 1228.
  60. McQuarrie, D. A., 2000, Statistical Mechanics (University Science Books, Sausalito), Chap. 14.
  61. Millman, R. S., and G. D. Parker, 1977, Elements of Differential Geometry (Prentice-Hall, Englewood Cliffs, NJ).
  62. Nelson, D. R., 2002, Defects and Geometry in Condensed Matter Physics (Cambridge University Press, Cambridge, England).
  63. Nelson, D. R., and L. Peliti, 1987, J. Phys. (Orsay, Fr.) 48, 1085.
  64. Neukrich, S., and G. H. M. van der Heijden, 2002, J. Elast. 69, 41.
  65. Neville, A. C., 1993, Biology of Fibrous Composites: Development Beyond the Cell Membrane (Cambridge University Press, Cambridge, England).
  66. O’Hern, C. S., L. E. Silbert, A. J. Liu, and S. R. Nagel, 2003, Phys. Rev. E 68, 011306.
  67. Olsen, K., and J. Bohr, 2010, Theor. Chem. Acc. 125, 207.
  68. Olsen, K., and J. Bohr, 2011, Europhys. Lett. 93, 60004.
  69. Orgel, J. P. R., T. C. Irving, A. Miller, and T. J. Wess, 2006, Proc. Natl. Acad. Sci. U.S.A. 103, 9001.
  70. Ottani, V., D. Martini, M. Franchi, A. Ruggeri, and M. Raspanti, 2002, Micron 33, 587.
  71. Pan, N., 2014, Appl. Phys. Rev. 1, 021302.
  72. Pan, N., and D. Brookstein, 2002, J. Appl. Polym. Sci. 83, 610.
  73. Peach, M., and J. S. Koehler, 1950, Phys. Rev. 80, 436.
  74. Renn, S. R., and T. C. Lubensky, 1988, Phys. Rev. A 38, 2132.
  75. Rubinstein, M., and D. R. Nelson, 1983, Phys. Rev. B 28, 6377.
  76. Sadoc, J.-F., and J. Charvolin, 2009, J. Phys. A 42, 465209.
  77. Sadoc, J.-F., and R. Mosseri, 2008, Geometrical Frustration (Cambridge University Press, Cambridge, England).
  78. Saff, E. B., and A. B. J. Kuijaars, 1997, Math Intellegencer 19, 5.
  79. Selinger, J. V., and R. F. Bruinsma, 1991, Phys. Rev. A 43, 2910.
  80. Sethna, J. P., D. C. Wright, and N. D. Mermin, 1983, Phys. Rev. Lett. 51, 467.
  81. Seung, H. S., and D. R. Nelson, 1988, Phys. Rev. A 38, 1005.
  82. Shin, H., and G. M. Grason, 2011, Europhys. Lett. 96, 36007.
  83. Šiber, A., 2007, arXiv:0711.3527.
  84. Starostin, E. L., 2006, J. Phys. Condens. Matter 18, S187.
  85. Svenšek, D., G. Veble, and R. Podgornik, 2010, Phys. Rev. E 82, 011708.
  86. Tortora, L., and O. D. Lavrentovich, 2011, Proc. Natl. Acad. Sci. U.S.A. 108, 5163.
  87. Weisel, J. W., 2004, Biophys. Chem. 112, 267.
  88. Weisel, J. W., C. Nagawami, and L. Makowski, 1987, Proc. Natl. Acad. Sci. U.S.A. 84, 8991.
  89. Wess, T. J., 2008, Biology of Fibrous Composites: Development Beyond the Cell Membrane (Springer, Boston), Chap. 3.
  90. Wright, D. C., and N. D. Mermin, 1989, Rev. Mod. Phys. 61, 385.
  91. Yang, S., L. Zhao, C. Yu, X. Zhou, J. Tang, P. Yuan, D. Chen, and D. Zhao, 2006, J. Am. Chem. Soc. 128, 10460.
  92. Yang, Y., R. B. Meyer, and M. F. Hagan, 2010, Phys. Rev. Lett. 104, 258102.

Sign In to Your Journals Account

Filter

Filter

Article Lookup

Enter a citation